Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.41 Carica papaya HOM05D008112 ORTHO05D010225 2.4e-47 191.8 94 100.0
Gohir.D02G169900 Gossypium hirsutum HOM05D008112 ORTHO05D010225 1.0e-18 96.7 97 55.7
Gorai.005G190400 Gossypium raimondii HOM05D008112 ORTHO05D010225 3.9e-18 94.7 97 54.6
Potri.008G120800 Populus trichocarpa HOM05D008112 ORTHO05D010225 1.9e-17 92.4 109 52.3
Gohir.A03G146800 Gossypium hirsutum HOM05D008112 ORTHO05D010225 1.3e-16 89.7 97 52.6
Manes.14G102600 Manihot esculenta HOM05D008112 ORTHO05D010225 1.3e-16 89.7 105 51.4
CiPaw.15G085200 Carya illinoinensis HOM05D008112 ORTHO05D010225 2.8e-16 88.6 110 48.2
Potri.010G124900 Populus trichocarpa HOM05D008112 ORTHO05D010225 8.2e-16 87.0 106 49.1
TAR622G0251 Trochodendron aralioides HOM05D008112 ORTHO05D010225 1.1e-15 86.7 105 45.7
Hma1.2p1_0061F.1_g033900 Hydrangea macrophylla HOM05D008112 ORTHO05D010225 4.1e-15 84.7 98 44.9
Thecc.02G230800 Theobroma cacao HOM05D008112 ORTHO05D010225 5.3e-15 84.3 98 50.0
Manes.06G068400 Manihot esculenta HOM05D008112 ORTHO05D010225 9.0e-15 83.6 106 49.1
Prupe.1G311100 Prunus persica HOM05D008112 ORTHO05D010225 9.0e-15 83.6 105 41.9
TAR371G0405 Trochodendron aralioides HOM05D008112 ORTHO05D010225 1.5e-14 82.8 96 45.8
FvH4_4g27360 Fragaria vesca HOM05D008112 ORTHO05D010225 2.6e-14 82.0 109 49.5
FAN12G3697 Fragaria x ananassa HOM05D008112 ORTHO05D010225 2.6e-14 82.0 109 49.5
FAN12G3827 Fragaria x ananassa HOM05D008112 ORTHO05D010225 2.6e-14 82.0 109 49.5
Nn3g17844 Nelumbo nucifera HOM05D008112 ORTHO05D010225 4.5e-14 81.3 106 44.3
Cfa018594 Carpinus fangiana HOM05D008112 ORTHO05D010225 1.0e-13 80.1 105 50.5
FAN22G0823 Fragaria x ananassa HOM05D008112 ORTHO05D010225 8.5e-13 77.0 116 44.0
Glyma.10G274200 Glycine max HOM05D008112 ORTHO05D010225 8.5e-13 77.0 103 43.7
FAN07G1645 Fragaria x ananassa HOM05D008112 ORTHO05D010225 3.2e-12 75.1 116 43.1
Glyma.20G115800 Glycine max HOM05D008112 ORTHO05D010225 3.2e-12 75.1 104 45.2
RcHm_v2.0_Chr4g0435171 Rosa chinensis HOM05D008112 ORTHO05D010225 3.2e-12 75.1 117 44.4
CiPaw.16G065000 Carya illinoinensis HOM05D008112 ORTHO05D010225 4.2e-12 74.7 102 48.0
Glyma.08G262400 Glycine max HOM05D008112 ORTHO05D010225 9.4e-12 73.6 102 43.1
Medtr1g110820 Medicago truncatula HOM05D008112 ORTHO05D010225 1.2e-11 73.2 102 40.2
Haze_17483 Corylus avellana HOM05D008112 ORTHO05D010225 4.6e-11 71.2 98 48.0
Lalb_Chr10g0100011 Lupinus albus HOM05D008112 ORTHO05D010225 6.1e-11 70.9 101 45.5
TPR.G1513 Trifolium pratense HOM05D008112 ORTHO05D010225 1.0e-10 70.1 102 43.1
Phvul.003G035700 Phaseolus vulgaris HOM05D008112 ORTHO05D010225 2.3e-10 68.9 105 41.0
Phvul.007G027300 Phaseolus vulgaris HOM05D008112 ORTHO05D010225 6.7e-10 67.4 104 40.4
Ciclev10017355m.g Citrus clementina HOM05D008112 ORTHO05D010225 8.8e-10 67.0 75 45.3
CSS0024667 Camellia sinensis var. sinensis HOM05D008112 ORTHO05D010225 4.3e-09 64.7 104 35.6
TPR.G39819 Trifolium pratense HOM05D008112 ORTHO05D010225 4.3e-09 64.7 93 40.9
Lj2g0015777 Lotus japonicus HOM05D008112 ORTHO05D010225 9.7e-09 63.5 98 42.9
DCAR_023658 Daucus carota HOM05D008112 ORTHO05D010225 1.3e-08 63.2 111 37.8
Rhsim12G0084800 Rhododendron simsii HOM05D008112 ORTHO05D010225 1.3e-08 63.2 93 40.9
Lalb_Chr06g0166071 Lupinus albus HOM05D008112 ORTHO05D010225 2.8e-08 62.0 93 40.9
Lsat_1_v5_gn_4_17580 Lactuca sativa HOM05D008112 ORTHO05D010225 8.2e-08 60.5 108 42.6
Lalb_Chr02g0145981 Lupinus albus HOM05D008112 ORTHO05D010225 1.1e-07 60.1 109 39.4
Lalb_Chr17g0342121 Lupinus albus HOM05D008112 ORTHO05D010225 2.4e-07 58.9 96 38.5
MSTRG.840 Avicennia marina HOM05D008112 ORTHO05D010225 3.1e-07 58.5 107 41.1
Atru.chr11.70 Acer truncatum HOM05D008112 ORTHO05D010225 1.5e-06 56.2 96 37.5
MELO3C012251.2 Cucumis melo HOM05D008112 ORTHO05D010225 2.6e-06 55.5 84 38.1
Lj5g0021475 Lotus japonicus HOM05D008112 ORTHO05D010225 5.9e-06 54.3 106 40.6
Sabra10G0094800 Salix brachista HOM05D008112 ORTHO05D010225 5.9e-06 54.3 85 42.4
TAR629G1885 Trochodendron aralioides HOM05D008112 ORTHO05D010225 5.9e-06 54.3 72 43.1


User provided reference genes

Program Settings