Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.399 Carica papaya HOM05D000004 ORTHO05D000002 2.9e-30 134.4 61 100.0
Cpa.g.sc4.133 Carica papaya HOM05D000004 ORTHO05D000002 2.2e-17 91.7 53 77.4
SHI10884 Sapria himalayana HOM05D000004 ORTHO05D000002 8.2e-17 89.7 53 77.4
Manes.17G016004 Manihot esculenta HOM05D000004 ORTHO05D000002 1.1e-16 89.4 53 77.4
Manes.17G118357 Manihot esculenta HOM05D000004 ORTHO05D000002 1.1e-16 89.4 53 77.4
SHI46302 Sapria himalayana HOM05D000004 ORTHO05D000002 3.1e-16 87.8 53 75.5
Manes.06G033812 Manihot esculenta HOM05D000004 ORTHO05D000002 6.9e-16 86.7 53 75.5
SHI48351 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-15 85.1 53 73.6
Manes.17G007266 Manihot esculenta HOM05D000004 ORTHO05D000002 2.6e-15 84.7 53 75.5
Manes.12G088990 Manihot esculenta HOM05D000004 ORTHO05D000002 1.0e-14 82.8 53 73.6
SHI24712 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-14 82.8 53 71.7
Cpa.g.sc18.14 Carica papaya HOM05D000004 ORTHO05D000002 1.3e-14 82.4 54 72.2
Cpa.g.sc8.99 Carica papaya HOM05D000004 ORTHO05D000002 1.7e-14 82.0 54 70.4
SHI48738 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-14 81.6 48 75.0
Oeu015199.1 Olea europaea HOM05D000004 ORTHO05D000002 3.8e-14 80.9 53 69.8
SHI02827 Sapria himalayana HOM05D000004 ORTHO05D000002 3.8e-14 80.9 51 68.6
Cpa.g.sc112.15 Carica papaya HOM05D000004 ORTHO05D000002 5.0e-14 80.5 50 66.0
Manes.08G059801 Manihot esculenta HOM05D000004 ORTHO05D000002 1.1e-13 79.3 53 67.9
Manes.11G130716 Manihot esculenta HOM05D000004 ORTHO05D000002 1.1e-13 79.3 53 67.9
Manes.03G138751 Manihot esculenta HOM05D000004 ORTHO05D000002 3.2e-13 77.8 51 70.6
Thhalv10012141m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 4.2e-13 77.4 53 67.9
SHI33292 Sapria himalayana HOM05D000004 ORTHO05D000002 5.5e-13 77.0 48 66.7
Cpa.g.sc14.28 Carica papaya HOM05D000004 ORTHO05D000002 7.2e-13 76.6 52 67.3
BolC4t24363H Brassica oleracea HOM05D000050 ORTHO05D000771 2.7e-12 74.7 53 64.2
Cpa.g.sc23.138 Carica papaya HOM05D000004 ORTHO05D000002 2.7e-12 74.7 51 64.7
Cpa.g.sc88.33 Carica papaya HOM05D000004 ORTHO05D000002 3.6e-12 74.3 53 67.9
Cpa.g.sc121.18 Carica papaya HOM05D000004 ORTHO05D000002 4.6e-12 73.9 52 61.5
Cpa.g.sc309.3 Carica papaya HOM05D001083 ORTHO05D006562 7.9e-12 73.2 48 66.7
Thhalv10017833m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 7.9e-12 73.2 48 66.7
QL05p032758 Quercus lobata HOM05D000004 ORTHO05D000002 7.9e-12 73.2 51 68.6
CiPaw.09G207300 Carya illinoinensis HOM05D000004 ORTHO05D000002 1.0e-11 72.8 53 62.3
Cpa.g.sc147.17 Carica papaya HOM05D000004 ORTHO05D000002 1.4e-11 72.4 51 64.7
Cpa.g.sc25.66 Carica papaya HOM05D000004 ORTHO05D000002 6.7e-11 70.1 52 71.2
Thhalv10027465m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 6.7e-11 70.1 53 62.3
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 2.0e-10 68.6 52 59.6
Cpa.g.sc122.34 Carica papaya HOM05D000004 ORTHO05D000002 5.7e-10 67.0 46 65.2
TWI56G0901 Tripterygium wilfordii HOM05D000004 ORTHO05D000048 1.7e-09 65.5 50 56.0
QL03p012718 Quercus lobata HOM05D000004 ORTHO05D050647 1.4e-08 62.4 52 55.8
PSO675G0046 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-08 62.0 52 51.9
Cpa.g.sc13.195 Carica papaya HOM05D000004 ORTHO05D000002 6.9e-08 60.1 42 61.9
Atru.chr11.883 Acer truncatum HOM05D000004 ORTHO05D000002 9.1e-08 59.7 52 51.9
Oeu023054.1 Olea europaea HOM05D000004 ORTHO05D000002 1.2e-07 59.3 54 55.6
BolC6t38605H Brassica oleracea HOM05D000004 ORTHO05D000002 2.6e-07 58.2 51 49.0
Thhalv10026804m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 3.4e-07 57.8 43 60.5
TPR.G39702 Trifolium pratense HOM05D000004 ORTHO05D000002 3.4e-07 57.8 51 54.9
Cpa.g.sc15.136 Carica papaya HOM05D000004 ORTHO05D000002 7.7e-07 56.6 33 69.7
Atru.chr7.1185 Acer truncatum HOM05D000004 ORTHO05D000002 1.0e-06 56.2 51 49.0
Cpa.g.sc44.47 Carica papaya HOM05D008870 ORTHO05D000002 1.0e-06 56.2 44 56.8
HanXRQChr06g0175231 Helianthus annuus HOM05D000004 ORTHO05D000002 1.0e-06 56.2 52 40.4
SHI15690 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-06 55.8 52 48.1
SHI25617 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-06 55.8 52 48.1
SHI52922 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-06 55.1 53 45.3
Atru.chr2.2548 Acer truncatum HOM05D003506 ORTHO05D004063 2.9e-06 54.7 52 44.2
BolC2t11371H Brassica oleracea HOM05D000004 ORTHO05D000002 2.9e-06 54.7 44 54.5
Cpa.g.sc1.40 Carica papaya HOM05D000004 ORTHO05D000002 2.9e-06 54.7 31 71.0
COL.COLO4_28806 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.9e-06 54.7 48 56.2
Hma1.2p1_1820F.1_g304130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.9e-06 54.7 51 45.1
SHI16403 Sapria himalayana HOM05D000004 ORTHO05D000002 3.8e-06 54.3 52 46.2
COL.COLO4_36542 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.0e-06 53.9 48 54.2
Actinidia00506 Actinidia chinensis HOM05D000004 ORTHO05D000002 6.5e-06 53.5 51 45.1
TWI81G0970 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.5e-06 53.5 52 40.4
CiPaw.03G095100 Carya illinoinensis HOM05D000004 ORTHO05D000002 8.5e-06 53.1 45 51.1
COL.COLO4_36883 Corchorus olitorius HOM05D000004 ORTHO05D000002 8.5e-06 53.1 48 54.2
ECA246G0443 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.5e-06 53.1 51 45.1
ECA246G3805 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.5e-06 53.1 51 45.1


User provided reference genes

Program Settings