Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 2.1e-95 352.4 188 100.0
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 1.8e-59 233.0 182 67.0
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 7.8e-58 227.6 186 68.3
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 2.9e-57 225.7 185 67.0
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 2.9e-57 225.7 185 64.9
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 5.0e-57 224.9 185 67.6
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 5.0e-57 224.9 189 65.6
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 1.9e-56 223.0 183 67.2
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 4.7e-55 218.4 191 67.5
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 3.0e-54 215.7 194 68.0
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 8.9e-54 214.2 183 63.9
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 2.0e-53 213.0 187 62.0
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 2.6e-53 212.6 183 63.9
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 2.6e-53 212.6 183 63.9
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 2.6e-53 212.6 187 66.3
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 3.4e-53 212.2 185 64.3
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 1.7e-52 209.9 178 67.4
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 2.2e-52 209.5 186 65.6
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 3.7e-52 208.8 182 64.3
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.8e-51 206.5 188 65.4
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 2.4e-51 206.1 185 61.1
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.4e-51 206.1 181 67.4
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 2.4e-51 206.1 187 63.6
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 3.2e-51 205.7 183 63.4
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 3.2e-51 205.7 182 66.5
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 4.1e-51 205.3 186 64.5
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 5.4e-51 204.9 194 60.3
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 9.2e-51 204.1 181 65.2
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 1.6e-50 203.4 184 65.2
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 2.7e-50 202.6 184 65.8
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 2.7e-50 202.6 184 66.3
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 3.5e-50 202.2 182 62.1
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.7e-49 199.9 182 65.4
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 1.7e-49 199.9 187 63.6
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 2.3e-49 199.5 183 64.5
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 3.0e-49 199.1 185 67.6
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 6.6e-49 198.0 182 64.8
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 8.6e-49 197.6 193 62.2
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 1.1e-48 197.2 193 59.1
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 1.1e-48 197.2 193 59.1
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 1.5e-48 196.8 182 62.6
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 2.5e-48 196.1 188 59.6
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 4.3e-48 195.3 182 64.3
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 5.6e-48 194.9 187 62.6
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 7.3e-48 194.5 184 63.0
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 9.5e-48 194.1 188 60.6
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 1.2e-47 193.7 178 64.6
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 1.6e-47 193.4 176 63.1
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 1.6e-47 193.4 176 63.1
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 1.6e-47 193.4 181 60.2
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 2.1e-47 193.0 178 62.9
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 3.6e-47 192.2 167 67.1
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 3.6e-47 192.2 188 56.9
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 8.0e-47 191.0 184 61.4
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 8.0e-47 191.0 186 61.3
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 1.1e-46 190.7 190 62.1
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 1.8e-46 189.9 173 62.4
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 6.8e-46 188.0 179 59.2
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 8.9e-46 187.6 187 62.0
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 1.2e-45 187.2 181 59.1
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 1.2e-45 187.2 129 76.0
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 1.5e-45 186.8 121 81.0
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 1.5e-45 186.8 140 68.6
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 2.0e-45 186.4 182 62.6
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 2.0e-45 186.4 181 59.1
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 4.4e-45 185.3 185 61.6
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 4.4e-45 185.3 187 61.0
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 7.5e-45 184.5 192 53.1
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 1.3e-44 183.7 132 70.5
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 1.7e-44 183.3 175 60.0
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 6.4e-44 181.4 181 59.7
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 1.4e-43 180.3 186 58.6
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 4.1e-43 178.7 173 59.0
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 7.0e-43 177.9 170 61.2
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 3.5e-42 175.6 128 69.5
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 4.6e-42 175.3 171 62.6
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 6.0e-42 174.9 201 54.2
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 7.8e-42 174.5 185 59.5
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 1.7e-41 173.3 176 59.7
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 3.0e-41 172.6 173 57.8
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 3.9e-41 172.2 116 77.6
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 6.6e-41 171.4 198 55.6
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 1.5e-40 170.2 184 54.3
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 1.5e-40 170.2 178 56.7
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.1e-39 166.4 180 57.8
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 8.1e-39 164.5 188 47.3
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 8.9e-38 161.0 156 53.2
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 1.3e-36 157.1 109 76.1
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 1.7e-36 156.8 149 59.7
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 3.7e-36 155.6 176 54.0
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 4.9e-36 155.2 93 83.9
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 1.1e-35 154.1 172 56.4
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 4.1e-35 152.1 181 54.1
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 2.7e-34 149.4 169 55.6
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 6.6e-33 144.8 165 51.5
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 5.6e-32 141.7 90 77.8
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 6.4e-28 128.3 144 54.9
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 2.4e-27 126.3 131 48.9
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 3.9e-25 119.0 148 48.6
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 9.6e-24 114.4 134 56.0
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 6.2e-23 111.7 126 48.4
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.3e-20 104.0 135 56.3
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 1.7e-20 103.6 121 57.9
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 6.4e-20 101.7 177 40.1
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 3.9e-17 92.4 114 47.4
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 1.5e-16 90.5 112 43.8
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 2.1e-15 86.7 108 47.2


User provided reference genes

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