Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.301 Carica papaya HOM05D000283 ORTHO05D006673 0.0e+00 1610.5 852 100.0
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 6.5e-120 436.0 904 38.5
QL08p057512 Quercus lobata HOM05D000283 ORTHO05D006673 2.1e-118 431.0 909 38.7
COL.COLO4_29238 Corchorus olitorius HOM05D000283 ORTHO05D006673 1.8e-101 374.8 953 33.1
Thecc.10G063100 Theobroma cacao HOM05D000283 ORTHO05D006673 2.6e-100 370.9 1033 31.7
Duzib114G0075 Durio zibethinus HOM05D000283 ORTHO05D006673 6.8e-93 346.3 1033 31.4
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 1.5e-92 345.1 1068 31.9
Prupe.2G224500 Prunus persica HOM05D000283 ORTHO05D006673 2.2e-91 341.3 910 35.4
CiPaw.01G279600 Carya illinoinensis HOM05D000283 ORTHO05D006673 4.9e-91 340.1 951 33.9
Atru.chr12.593 Acer truncatum HOM05D000283 ORTHO05D006673 3.1e-90 337.4 823 35.7
Ciclev10033332m.g Citrus clementina HOM05D000283 ORTHO05D006673 6.6e-88 329.7 919 33.8
CSS0006513 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 6.1e-86 323.2 907 34.7
CiPaw.02G178500 Carya illinoinensis HOM05D000283 ORTHO05D006673 1.0e-85 322.4 1036 31.4
CSS0040218 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 5.8e-84 316.6 907 34.4
Gohir.A05G352800 Gossypium hirsutum HOM05D000283 ORTHO05D006673 6.4e-83 313.2 842 33.3
Haze_16971 Corylus avellana HOM05D000283 ORTHO05D006673 1.1e-82 312.4 959 31.8
TWI38G0559 Tripterygium wilfordii HOM05D000283 ORTHO05D006673 2.7e-81 307.8 927 32.8
Gorai.012G066900 Gossypium raimondii HOM05D000283 ORTHO05D006673 3.9e-80 303.9 827 33.7
Gohir.D04G060201 Gossypium hirsutum HOM05D000283 ORTHO05D006673 2.5e-79 301.2 827 33.3
RcHm_v2.0_Chr1g0365001 Rosa chinensis HOM05D000283 ORTHO05D006673 6.2e-78 296.6 891 34.2
Duzib106G1116 Durio zibethinus HOM05D000283 ORTHO05D006673 5.2e-77 293.5 998 29.3
Potri.010G213800 Populus trichocarpa HOM05D000283 ORTHO05D006673 2.0e-76 291.6 919 34.4
Manes.10G039300 Manihot esculenta HOM05D000283 ORTHO05D006673 3.4e-76 290.8 883 34.8
Potri.008G047600 Populus trichocarpa HOM05D000283 ORTHO05D006673 2.0e-73 281.6 927 31.8
Manes.10G039200 Manihot esculenta HOM05D000283 ORTHO05D006673 2.3e-72 278.1 888 34.1
Sabra10G0165500 Salix brachista HOM05D000283 ORTHO05D006673 6.6e-72 276.6 935 33.3
MD01G1117200 Malus domestica HOM05D000283 ORTHO05D006673 1.6e-70 271.9 856 33.4
FAN03G1488 Fragaria x ananassa HOM05D000283 ORTHO05D006673 2.3e-69 268.1 895 33.7
Rhsim09G0155800 Rhododendron simsii HOM05D000283 ORTHO05D006673 5.2e-69 266.9 928 32.1
FAN06G2682 Fragaria x ananassa HOM05D000283 ORTHO05D006673 1.5e-68 265.4 897 33.3
Hma1.2p1_0348F.1_g131680 Hydrangea macrophylla HOM05D000283 ORTHO05D006673 9.9e-68 262.7 890 32.6
FvH4_7g20760 Fragaria vesca HOM05D000283 ORTHO05D006673 2.4e-66 258.1 897 33.1
FAN06G0550 Fragaria x ananassa HOM05D000283 ORTHO05D006673 7.1e-66 256.5 898 33.3
arahy.Tifrunner.gnm1.ann1.U4C8JV Arachis hypogaea HOM05D000283 ORTHO05D006673 9.2e-66 256.1 964 30.7
Sabra08G0033700 Salix brachista HOM05D000283 ORTHO05D006673 9.2e-66 256.1 928 31.0
MD07G1184600 Malus domestica HOM05D000283 ORTHO05D006673 2.1e-65 255.0 851 33.4
Glyma.10G292400 Glycine max HOM05D000283 ORTHO05D006673 3.5e-65 254.2 963 30.4
Glyma.20G242400 Glycine max HOM05D000283 ORTHO05D006673 3.5e-65 254.2 953 30.5
TAR633G0056 Trochodendron aralioides HOM05D000283 ORTHO05D006673 3.5e-65 254.2 923 30.8
FAN10G3387 Fragaria x ananassa HOM05D000283 ORTHO05D005391 3.9e-64 250.8 885 32.9
arahy.Tifrunner.gnm1.ann1.SA4FWZ Arachis hypogaea HOM05D000283 ORTHO05D006673 1.9e-63 248.4 966 30.5
Phvul.007G007900 Phaseolus vulgaris HOM05D000283 ORTHO05D006673 5.2e-61 240.4 956 29.2
TAR636G0162 Trochodendron aralioides HOM05D000283 ORTHO05D006673 6.0e-57 226.9 921 28.6
TPR.G10427 Trifolium pratense HOM05D000283 ORTHO05D006673 2.1e-54 218.4 972 29.8
VMungo0720G0439 Vigna mungo HOM05D000283 ORTHO05D006673 2.1e-54 218.4 955 28.4
Lalb_Chr02g0143851 Lupinus albus HOM05D000283 ORTHO05D006673 6.2e-54 216.9 894 28.7
Medtr1g115950 Medicago truncatula HOM05D000283 ORTHO05D006673 2.4e-53 214.9 945 27.9
Psat6g238520 Pisum sativum HOM05D000283 ORTHO05D006673 1.7e-51 208.8 967 29.1
CANSAT56G3782 Cannabis sativa HOM05D000283 ORTHO05D006673 4.6e-49 200.7 936 28.6
PGSC0003DMG400011483 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.5e-44 185.7 911 29.7
Peaxi162Scf00135g00027 Petunia axillaris HOM05D000283 ORTHO05D006673 4.5e-44 184.1 899 28.9
THA.LOC104799366 Tarenaya hassleriana HOM05D000283 ORTHO05D006673 2.1e-41 175.3 968 26.0
Nitab4.5_0006737g0060 Nicotiana tabacum HOM05D000283 ORTHO05D006673 7.9e-41 173.3 885 29.0
Nitab4.5_0007221g0010 Nicotiana tabacum HOM05D000283 ORTHO05D006673 1.0e-40 172.9 882 29.0
SalBow6G2235 Salvia bowleyana HOM05D000283 ORTHO05D006673 8.7e-40 169.9 885 27.3
Sopen04g005360 Solanum pennellii HOM05D000283 ORTHO05D006673 1.9e-39 168.7 904 30.0
MSTRG.8954 Avicennia marina HOM05D000283 ORTHO05D006673 2.8e-38 164.9 902 27.5
MSTRG.27328 Avicennia marina HOM05D000283 ORTHO05D006673 4.8e-38 164.1 922 26.8
Cc02_g08660 Coffea canephora HOM05D000283 ORTHO05D006673 8.1e-38 163.3 916 27.7
DCAR_020267 Daucus carota HOM05D000457 ORTHO05D000560 8.1e-38 163.3 904 27.5
Nn2g11490 Nelumbo nucifera HOM05D000283 ORTHO05D006673 2.4e-37 161.8 840 26.9
Actinidia29198 Actinidia chinensis HOM05D000283 ORTHO05D006673 9.9e-36 156.4 691 29.2
Lj5g0015824 Lotus japonicus HOM05D000283 ORTHO05D006673 2.4e-34 151.8 938 26.5
THA.LOC104809887 Tarenaya hassleriana HOM05D000283 ORTHO05D006673 4.6e-33 147.5 976 26.4
ClCG09G020310 Citrullus lanatus HOM05D000283 ORTHO05D006673 1.3e-32 146.0 948 26.1
Lj8A92T85 Lonicera japonica HOM05D000283 ORTHO05D006673 1.8e-32 145.6 906 27.8
Migut.F00680 Erythranthe guttata HOM05D000283 ORTHO05D006673 3.0e-32 144.8 861 25.1
Ca_11324_v3 Cicer arietinum L. HOM05D000283 ORTHO05D006673 9.0e-29 133.3 525 29.0
Aqoxy2G01934 Aquilegia oxysepala HOM05D000283 ORTHO05D006673 2.0e-28 132.1 924 25.4
Oeu025162.3 Olea europaea HOM05D000283 ORTHO05D006673 4.5e-28 131.0 714 26.8
Lalb_Chr02g0143831 Lupinus albus HOM05D000283 ORTHO05D006673 7.6e-28 130.2 877 26.0
Eucgr.G02778 Eucalyptus grandis HOM05D000283 ORTHO05D006673 2.2e-27 128.6 971 26.7
GSVIVG01032629001 Vitis vinifera HOM05D000283 ORTHO05D006673 2.0e-15 89.0 131 44.3
SGA_v2.0_scaffold60G20995 Striga asiatica HOM05D000283 ORTHO05D006673 5.7e-15 87.4 853 23.1
Solyc04g010185.1 Solanum lycopersicum HOM05D000283 ORTHO05D006673 1.3e-14 86.3 478 28.9
AT5G13590 Arabidopsis thaliana HOM05D010678 ORTHO05D006673 3.7e-14 84.7 669 25.7
ClCG09G020330 Citrullus lanatus HOM05D000283 ORTHO05D006673 2.4e-13 82.0 302 28.5
PGSC0003DMG400011491 Solanum tuberosum HOM05D000283 ORTHO05D006673 2.4e-13 82.0 685 25.5
AL6G24200 Arabidopsis lyrata HOM05D010678 ORTHO05D006673 3.1e-13 81.6 750 24.8
Carub.0006s1175 Capsella rubella HOM05D010678 ORTHO05D006673 3.1e-13 81.6 902 23.8
Oeu025164.1 Olea europaea HOM05D000283 ORTHO05D010811 1.9e-10 72.4 248 29.8
Sed0006338 Sechium edule HOM05D000283 ORTHO05D006673 1.9e-10 72.4 338 26.6
Thhalv10012490m.g Eutrema salsugineum HOM05D010678 ORTHO05D006673 2.5e-10 72.0 824 22.9
BcaNung01143 Brassica carinata HOM05D010678 ORTHO05D006673 7.2e-10 70.5 622 23.8
CsaV3_5G026070 Cucumis sativus L. HOM05D000283 ORTHO05D006673 7.2e-10 70.5 280 28.2
MELO3C025491.2 Cucumis melo HOM05D000283 ORTHO05D006673 2.7e-09 68.6 354 25.1
C02p06270 Brassica napus HOM05D010678 ORTHO05D006673 3.0e-08 65.1 609 23.8
BraA10t44531Z Brassica rapa HOM05D010678 ORTHO05D006673 3.0e-08 65.1 626 24.9
Sp6g30440 Schrenkiella parvula HOM05D010678 ORTHO05D006673 3.9e-08 64.7 735 22.6
Sopen04g005270 Solanum pennellii HOM05D000283 ORTHO05D006673 3.9e-08 64.7 691 24.6
BcaC04g19099 Brassica carinata HOM05D010678 ORTHO05D006673 5.1e-08 64.3 644 24.1
DCAR_010662 Daucus carota HOM05D000283 ORTHO05D006673 8.8e-08 63.5 906 22.6
CARHR199850 Cardamine hirsuta HOM05D010678 ORTHO05D006673 1.5e-07 62.8 667 24.6
CDE07G1705 Ceratophyllum demersum HOM05D000283 ORTHO05D006673 2.6e-07 62.0 897 23.5
MELO3C025488.2 Cucumis melo HOM05D000283 ORTHO05D006673 4.4e-07 61.2 294 26.9
Psat3g141160 Pisum sativum HOM05D000846 ORTHO05D001340 4.4e-07 61.2 133 39.1
BolC9t59195H Brassica oleracea HOM05D010678 ORTHO05D006673 1.7e-06 59.3 631 24.1
Sed0026677 Sechium edule HOM05D000283 ORTHO05D006673 3.7e-06 58.2 341 25.8
Solyc04g010180.4 Solanum lycopersicum HOM05D000283 ORTHO05D006673 4.8e-06 57.8 121 37.2
Psat3g141280 Pisum sativum HOM05D000846 ORTHO05D001340 6.3e-06 57.4 130 37.7


User provided reference genes

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