Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.297 Carica papaya HOM05D001787 ORTHO05D007379 4.0e-69 264.6 130 100.0
Prupe.2G221900 Prunus persica HOM05D001787 ORTHO05D007379 9.2e-50 200.3 128 77.3
Thecc.10G063800 Theobroma cacao HOM05D001787 ORTHO05D007379 3.5e-49 198.4 130 76.2
QL08p057423 Quercus lobata HOM05D001787 ORTHO05D007379 4.5e-49 198.0 129 77.5
RcHm_v2.0_Chr1g0364681 Rosa chinensis HOM05D001787 ORTHO05D007379 4.5e-49 198.0 128 75.8
Atru.chr12.602 Acer truncatum HOM05D001787 ORTHO05D007379 2.9e-48 195.3 128 77.3
Cfa001565 Carpinus fangiana HOM05D001787 ORTHO05D007379 2.9e-48 195.3 128 77.3
FvH4_7g20650 Fragaria vesca HOM05D001787 ORTHO05D007379 2.9e-48 195.3 128 74.2
FAN06G3907 Fragaria x ananassa HOM05D001787 ORTHO05D007379 2.9e-48 195.3 128 74.2
Haze_16963 Corylus avellana HOM05D001787 ORTHO05D007379 5.0e-48 194.5 128 76.6
Dinv31384 Davidia involucrata HOM05D001787 ORTHO05D007379 5.0e-48 194.5 129 77.5
Actinidia38231 Actinidia chinensis HOM05D001787 ORTHO05D007379 8.6e-48 193.7 127 77.2
Duzib114G0848 Durio zibethinus HOM05D001787 ORTHO05D007379 8.6e-48 193.7 130 74.6
MD07G1183200 Malus domestica HOM05D001787 ORTHO05D007379 8.6e-48 193.7 128 75.0
FAN03G1672 Fragaria x ananassa HOM05D001787 ORTHO05D007379 1.1e-47 193.4 128 72.7
Lj1A929T67 Lonicera japonica HOM05D001787 ORTHO05D007379 1.5e-47 193.0 127 76.4
Lsat_1_v5_gn_9_66800 Lactuca sativa HOM05D001787 ORTHO05D007379 1.9e-47 192.6 130 73.1
Actinidia03009 Actinidia chinensis HOM05D001787 ORTHO05D007379 2.5e-47 192.2 129 76.0
Rhsim03G0121100 Rhododendron simsii HOM05D001787 ORTHO05D007379 2.5e-47 192.2 127 77.2
CiPaw.01G279000 Carya illinoinensis HOM05D001787 ORTHO05D007379 3.3e-47 191.8 128 77.3
FAN06G2736 Fragaria x ananassa HOM05D001787 ORTHO05D007379 3.3e-47 191.8 128 73.4
FAN10G0756 Fragaria x ananassa HOM05D001787 ORTHO05D007379 3.3e-47 191.8 128 71.9
Sp6g08980 Schrenkiella parvula HOM05D001787 ORTHO05D007379 3.3e-47 191.8 125 73.6
CSS0020776 Camellia sinensis var. sinensis HOM05D001787 ORTHO05D007379 4.3e-47 191.4 129 76.0
CSS0041014 Camellia sinensis var. sinensis HOM05D001787 ORTHO05D007379 4.3e-47 191.4 129 76.0
Potri.010G214600 Populus trichocarpa HOM05D001787 ORTHO05D007379 4.3e-47 191.4 128 74.2
THA.LOC104799365 Tarenaya hassleriana HOM05D001787 ORTHO05D007379 4.3e-47 191.4 128 73.4
PGR142G1002 Punica granatum HOM05D001787 ORTHO05D007379 7.3e-47 190.7 130 75.4
Ciclev10032030m.g Citrus clementina HOM05D001787 ORTHO05D007379 9.5e-47 190.3 130 75.4
Ciclev10032318m.g Citrus clementina HOM05D001787 ORTHO05D007379 9.5e-47 190.3 130 73.8
ECA232G1288 Erigeron canadensis HOM05D001787 ORTHO05D007379 9.5e-47 190.3 128 74.2
Potri.008G047100 Populus trichocarpa HOM05D001787 ORTHO05D007379 9.5e-47 190.3 128 73.4
Manes.07G105900 Manihot esculenta HOM05D001787 ORTHO05D007379 1.6e-46 189.5 128 75.0
FAN01G1155 Fragaria x ananassa HOM05D001787 ORTHO05D007379 2.1e-46 189.1 128 71.1
FAN01G1685 Fragaria x ananassa HOM05D001787 ORTHO05D007379 2.1e-46 189.1 128 71.1
HanXRQChr09g0247601 Helianthus annuus HOM05D001787 ORTHO05D007379 2.1e-46 189.1 128 73.4
Sabra08G0033300 Salix brachista HOM05D001787 ORTHO05D007379 2.1e-46 189.1 128 73.4
vmacro07105 Vaccinium macrocarpon HOM05D001787 ORTHO05D007379 2.1e-46 189.1 127 77.2
Sabra10G0165900 Salix brachista HOM05D001787 ORTHO05D007379 2.8e-46 188.7 128 72.7
TPR.G10398 Trifolium pratense HOM05D001787 ORTHO05D007379 4.7e-46 188.0 130 72.3
arahy.Tifrunner.gnm1.ann1.8433IQ Arachis hypogaea HOM05D001787 ORTHO05D007379 6.1e-46 187.6 127 74.8
CARHR259750 Cardamine hirsuta HOM05D001787 ORTHO05D007379 6.1e-46 187.6 124 72.6
COL.COLO4_06779 Corchorus olitorius HOM05D001787 ORTHO05D007379 6.1e-46 187.6 129 72.9
Nn2g12941 Nelumbo nucifera HOM05D001787 ORTHO05D007379 1.4e-45 186.4 130 70.8
Duzib128G2020 Durio zibethinus HOM05D001787 ORTHO05D007379 1.8e-45 186.0 130 72.3
arahy.Tifrunner.gnm1.ann1.53I6EC Arachis hypogaea HOM05D001787 ORTHO05D007379 3.1e-45 185.3 127 74.0
Ca_11343_v3 Cicer arietinum L. HOM05D001787 ORTHO05D007379 3.1e-45 185.3 128 72.7
Ca_30325_v3 Cicer arietinum L. HOM05D001787 ORTHO05D007379 3.1e-45 185.3 128 72.7
AL6G42610 Arabidopsis lyrata HOM05D001787 ORTHO05D007379 4.0e-45 184.9 124 71.8
Eucgr.G02782 Eucalyptus grandis HOM05D001787 ORTHO05D007379 4.0e-45 184.9 128 74.2
TAR369G0202 Trochodendron aralioides HOM05D001787 ORTHO05D007379 4.0e-45 184.9 127 74.0
CANSAT78G1459 Cannabis sativa HOM05D001787 ORTHO05D007379 5.2e-45 184.5 128 69.5
DCAR_015260 Daucus carota HOM05D001787 ORTHO05D007379 5.2e-45 184.5 126 73.8
Ah.10g033150 Amaranthus hybridus HOM05D001787 ORTHO05D007379 6.8e-45 184.1 128 71.9
AT4G08790 Arabidopsis thaliana HOM05D001787 ORTHO05D007379 8.9e-45 183.7 124 71.0
Aa31LG9G14560 Aethionema arabicum HOM05D002613 ORTHO05D003140 1.2e-44 183.3 125 70.4
A09p29950 Brassica napus HOM05D001787 ORTHO05D007379 1.5e-44 183.0 124 70.2
BraA09t38558Z Brassica rapa HOM05D001787 ORTHO05D007379 1.5e-44 183.0 124 70.2
Lj5g0019356 Lotus japonicus HOM05D001787 ORTHO05D007379 1.5e-44 183.0 128 72.7
Carub.0006s2729 Capsella rubella HOM05D001787 ORTHO05D007379 2.0e-44 182.6 130 70.8
AUR62043536 Chenopodium quinoa HOM05D001787 ORTHO05D007379 2.0e-44 182.6 128 71.1
BcaB01g01360 Brassica carinata HOM05D001787 ORTHO05D007379 2.6e-44 182.2 124 71.0
BcaC04g20922 Brassica carinata HOM05D001787 ORTHO05D007379 2.6e-44 182.2 124 69.4
C09p37900 Brassica napus HOM05D001787 ORTHO05D007379 2.6e-44 182.2 124 69.4
BolC9t56623H Brassica oleracea HOM05D001787 ORTHO05D007379 2.6e-44 182.2 124 69.4
Sed0008817 Sechium edule HOM05D001787 ORTHO05D007379 2.6e-44 182.2 128 70.3
ClCG02G013710 Citrullus lanatus HOM05D001787 ORTHO05D007379 4.4e-44 181.4 128 69.5
Medtr1g116080 Medicago truncatula HOM05D001787 ORTHO05D007379 4.4e-44 181.4 128 71.1
PSO384G4279 Papaver somniferum HOM05D001787 ORTHO05D007379 4.4e-44 181.4 128 68.8
Sopen05g033400 Solanum pennellii HOM05D001787 ORTHO05D007379 4.4e-44 181.4 130 70.0
Aqoxy4G03125 Aquilegia oxysepala HOM05D001787 ORTHO05D007379 5.8e-44 181.0 129 68.2
VMungo0720G0451 Vigna mungo HOM05D001787 ORTHO05D007379 5.8e-44 181.0 130 70.8
Thhalv10028848m.g Eutrema salsugineum HOM05D001787 ORTHO05D007379 7.5e-44 180.6 130 70.0
Lalb_Chr06g0164071 Lupinus albus HOM05D001787 ORTHO05D007379 7.5e-44 180.6 128 70.3
Gohir.D10G216800 Gossypium hirsutum HOM05D001787 ORTHO05D007379 9.8e-44 180.3 129 68.2
Phvul.007G007100 Phaseolus vulgaris HOM05D001787 ORTHO05D007379 9.8e-44 180.3 130 70.8
Hund19285 Selenicereus undatus HOM05D001787 ORTHO05D007379 1.3e-43 179.9 128 70.3
Solyc05g054940.3 Solanum lycopersicum HOM05D001787 ORTHO05D007379 1.3e-43 179.9 130 69.2
GSVIVG01032636001 Vitis vinifera HOM05D001787 ORTHO05D007379 1.3e-43 179.9 127 72.4
CAN.G1465.16 Capsicum annuum HOM05D001787 ORTHO05D007379 1.7e-43 179.5 127 70.9
Gohir.A10G208500 Gossypium hirsutum HOM05D001787 ORTHO05D007379 2.9e-43 178.7 129 66.7
PGSC0003DMG400023411 Solanum tuberosum HOM05D001787 ORTHO05D007379 2.9e-43 178.7 127 70.9
Gorai.011G242400 Gossypium raimondii HOM05D001787 ORTHO05D007379 3.7e-43 178.3 129 67.4
Psat6g239680 Pisum sativum HOM05D001787 ORTHO05D007379 3.7e-43 178.3 128 69.5
Migut.D01862 Erythranthe guttata HOM05D001787 ORTHO05D007379 1.1e-42 176.8 127 70.1
Sc06g0001840 Simmondsia chinensis HOM05D001787 ORTHO05D007379 1.1e-42 176.8 127 68.5
Glyma.10G292900 Glycine max HOM05D001787 ORTHO05D007379 1.9e-42 176.0 128 71.1
MBI05_g16175_MAGBIO Magnolia biondii HOM05D001787 ORTHO05D007379 1.9e-42 176.0 127 70.1
Nitab4.5_0003965g0070 Nicotiana tabacum HOM05D001787 ORTHO05D007379 1.9e-42 176.0 127 70.9
EL10Ac2g03517 Beta vulgaris HOM05D001787 ORTHO05D007379 3.2e-42 175.3 128 68.8
unitig_37.g12738 Utricularia gibba HOM05D001787 ORTHO05D007379 5.4e-42 174.5 127 69.3
CSS0012291 Camellia sinensis var. sinensis HOM05D001787 ORTHO05D007379 1.2e-41 173.3 127 67.7
CsaV3_5G006480 Cucumis sativus L. HOM05D001787 ORTHO05D007379 1.2e-41 173.3 128 65.6
MELO3C011712.2 Cucumis melo HOM05D001787 ORTHO05D007379 3.5e-41 171.8 128 64.8
HPP92_021198 Vanilla planifolia HOM05D001787 ORTHO05D007379 3.5e-41 171.8 127 65.4
Peaxi162Scf00015g02810 Petunia axillaris HOM05D001787 ORTHO05D007379 7.8e-41 170.6 122 70.5
Os12g0502500 Oryza sativa ssp. japonica HOM05D001787 ORTHO05D007379 1.7e-40 169.5 123 65.0
SGA_v2.0_scaffold7G04090 Striga asiatica HOM05D001961 ORTHO05D002286 3.0e-40 168.7 130 66.2
TWI15G0363 Tripterygium wilfordii HOM05D001787 ORTHO05D007379 6.6e-40 167.5 128 64.8
Zm00001eb409400 Zea mays HOM05D001787 ORTHO05D007379 2.5e-39 165.6 129 60.5
ATR0594G237 Amborella trichopoda HOM05D001787 ORTHO05D007379 1.8e-37 159.5 130 63.1
CDE04G0577 Ceratophyllum demersum HOM05D001787 ORTHO05D007379 4.0e-37 158.3 144 57.6
SEGI_21249 Sequoiadendron giganteum HOM05D001787 ORTHO05D007379 6.8e-37 157.5 127 61.4
SalBow3G2882 Salvia bowleyana HOM05D001787 ORTHO05D007379 2.9e-35 152.1 113 63.7
Glyma.20G243133 Glycine max HOM05D001787 ORTHO05D007379 6.0e-33 144.4 127 62.2
Oeu050632.1 Olea europaea HOM05D001787 ORTHO05D007379 6.0e-33 144.4 102 66.7
Mapoly0061s0014 Marchantia polymorpha HOM05D001787 ORTHO05D007379 7.8e-33 144.1 127 54.3
AUR62025545 Chenopodium quinoa HOM05D001787 ORTHO05D007379 8.6e-32 140.6 99 68.7
AUR62044405 Chenopodium quinoa HOM05D001787 ORTHO05D007379 1.2e-30 136.7 92 70.7
Cc00_g30860 Coffea canephora HOM05D001787 ORTHO05D007379 6.2e-30 134.4 99 64.6
SMO118G0339 Selaginella moellendorffii HOM05D001787 ORTHO05D007379 6.2e-30 134.4 124 52.4
MBI06_g44152_MAGBIO Magnolia biondii HOM05D001787 ORTHO05D007379 1.4e-29 133.3 99 63.6
Lj1C927T7 Lonicera japonica HOM05D001787 ORTHO05D007379 5.2e-29 131.3 75 84.0
CBR_g21238 Chara braunii HOM05D001787 ORTHO05D007379 1.7e-27 126.3 124 52.4
Cre14.g609030 Chlamydomonas reinhardtii HOM05D001787 ORTHO05D007379 5.4e-26 121.3 129 47.3
PRCOL_00001000 Prasinoderma coloniale HOM05D001787 ORTHO05D007379 2.1e-25 119.4 120 48.3
MCO16G130 Micromonas commoda HOM05D001787 ORTHO05D007379 2.7e-25 119.0 123 46.3
SalBow2G3358 Salvia bowleyana HOM05D001787 ORTHO05D007379 1.3e-24 116.7 116 52.6
MBI08_g41673_MAGBIO Magnolia biondii HOM05D001787 ORTHO05D007379 7.3e-23 110.9 98 54.1
SalBow3G3575 Salvia bowleyana HOM05D001787 ORTHO05D007379 5.2e-21 104.8 81 60.5
Hma1.2p1_0207F.1_g088030 Hydrangea macrophylla HOM05D001787 ORTHO05D007379 2.6e-20 102.4 75 65.3
Nitab4.5_0000914g0050 Nicotiana tabacum HOM05D001787 ORTHO05D007379 6.4e-19 97.8 130 46.9
MBI06_g21004_MAGBIO Magnolia biondii HOM05D001787 ORTHO05D007379 3.9e-16 88.6 68 63.2
Haze_26272 Corylus avellana HOM05D001787 ORTHO05D007379 8.7e-16 87.4 124 37.1
AUR62043799 Chenopodium quinoa HOM05D001787 ORTHO05D007379 2.0e-12 76.3 40 85.0
MBI15_g21025_MAGBIO Magnolia biondii HOM05D001787 ORTHO05D007379 1.7e-11 73.2 44 72.7
AagrBONN_evm.TU.Sc2ySwM_228.443 Anthoceros agrestis HOM05D001787 ORTHO05D007379 2.7e-09 65.9 44 63.6


User provided reference genes

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