Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.0e-120 436.8 227 100.0
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 2.3e-40 169.9 159 62.3
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 2.6e-39 166.4 169 60.4
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.7e-38 163.7 178 56.7
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 2.8e-38 162.9 167 58.7
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 4.8e-38 162.2 178 54.5
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 8.2e-38 161.4 162 59.3
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 8.2e-38 161.4 165 59.4
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.1e-37 159.5 174 57.5
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 4.1e-37 159.1 162 58.6
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.6e-36 157.1 176 56.2
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.0e-36 156.8 162 57.4
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 2.6e-36 156.4 169 57.4
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 3.5e-36 156.0 165 61.8
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 3.5e-36 156.0 160 61.9
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 4.5e-36 155.6 157 58.6
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 5.9e-36 155.2 174 57.5
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 7.7e-36 154.8 141 63.8
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 7.7e-36 154.8 151 61.6
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.0e-35 154.5 168 57.1
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 1.3e-35 154.1 185 54.6
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 1.3e-35 154.1 176 56.8
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.3e-35 154.1 134 67.9
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.7e-35 153.7 146 65.8
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.7e-35 153.7 162 58.0
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 2.9e-35 152.9 141 66.0
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 3.8e-35 152.5 168 57.7
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 3.8e-35 152.5 145 61.4
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 5.0e-35 152.1 168 56.5
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 6.5e-35 151.8 177 53.7
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 6.5e-35 151.8 171 56.7
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 8.5e-35 151.4 172 57.6
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 8.5e-35 151.4 146 61.6
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 1.1e-34 151.0 142 63.4
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 1.5e-34 150.6 164 61.6
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 1.5e-34 150.6 179 55.3
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.5e-34 150.6 88 85.2
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 1.5e-34 150.6 171 58.5
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.2e-34 149.4 111 72.1
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 3.2e-34 149.4 140 60.7
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 4.2e-34 149.1 84 89.3
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 4.2e-34 149.1 119 68.9
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 4.2e-34 149.1 136 63.2
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 4.2e-34 149.1 111 72.1
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 4.2e-34 149.1 170 57.1
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 7.2e-34 148.3 128 62.5
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 9.4e-34 147.9 166 52.4
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 1.2e-33 147.5 160 58.8
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 1.6e-33 147.1 162 53.7
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 1.6e-33 147.1 164 52.4
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 2.7e-33 146.4 168 56.5
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 2.7e-33 146.4 169 52.7
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 3.6e-33 146.0 151 57.6
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 3.6e-33 146.0 165 55.8
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 3.6e-33 146.0 159 53.5
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 4.7e-33 145.6 102 71.6
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 4.7e-33 145.6 158 55.7
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 8.0e-33 144.8 145 59.3
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 8.0e-33 144.8 167 53.3
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 1.0e-32 144.4 121 66.9
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 1.0e-32 144.4 141 61.0
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.4e-32 144.1 168 56.0
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 1.4e-32 144.1 165 55.8
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 1.4e-32 144.1 125 64.8
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 1.8e-32 143.7 165 55.8
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.8e-32 143.7 204 48.0
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 1.8e-32 143.7 151 58.3
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 4.0e-32 142.5 172 54.1
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 4.0e-32 142.5 111 72.1
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 5.2e-32 142.1 165 57.0
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 5.2e-32 142.1 172 54.1
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 5.2e-32 142.1 176 51.1
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 5.2e-32 142.1 176 51.1
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 8.8e-32 141.4 172 54.1
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 1.2e-31 141.0 143 59.4
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.2e-31 141.0 137 61.3
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.2e-31 141.0 159 54.1
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.2e-31 141.0 213 46.0
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.2e-31 141.0 192 49.0
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.5e-31 140.6 172 51.2
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 2.0e-31 140.2 168 50.0
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 5.7e-31 138.7 171 49.7
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 1.3e-30 137.5 167 52.7
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.7e-30 137.1 169 50.3
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 2.2e-30 136.7 89 77.5
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 3.7e-30 136.0 146 56.8
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.4e-29 134.0 125 60.0
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 1.4e-29 134.0 97 70.1
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 2.4e-29 133.3 109 66.1
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 2.4e-29 133.3 168 51.8
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 3.1e-29 132.9 165 51.5
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 5.4e-29 132.1 110 65.5
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 7.0e-29 131.7 110 64.5
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 7.7e-28 128.3 142 53.5
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 7.7e-28 128.3 110 63.6
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 1.9e-26 123.6 148 51.4
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 3.2e-26 122.9 142 51.4
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 7.2e-26 121.7 180 44.4
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 6.8e-24 115.2 164 45.1
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 8.8e-24 114.8 66 86.4
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 3.4e-23 112.8 123 52.0
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 3.4e-23 112.8 112 53.6
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 5.7e-23 112.1 80 73.8
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 2.8e-22 109.8 76 69.7
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 4.9e-22 109.0 84 65.5
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 2.5e-18 96.7 81 64.2
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 6.8e-16 88.6 48 89.6
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 8.9e-16 88.2 75 54.7
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 1.2e-15 87.8 49 83.7
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 1.5e-15 87.4 75 54.7
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 2.2e-14 83.6 109 49.5
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 2.9e-14 83.2 49 79.6
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 1.7e-11 73.9 125 41.6
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 3.6e-09 66.2 70 45.7
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 3.6e-09 66.2 73 54.8
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 6.2e-09 65.5 76 47.4
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 6.8e-08 62.0 49 67.3


User provided reference genes

Program Settings