Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 1.2e-144 516.5 267 100.0
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 2.8e-101 372.5 262 72.5
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 8.1e-101 370.9 261 71.3
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 1.8e-100 369.8 261 71.3
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 4.0e-100 368.6 261 72.0
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 1.2e-99 367.1 261 70.9
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 2.6e-99 365.9 262 70.6
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 1.7e-98 363.2 258 69.0
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 2.2e-98 362.8 260 70.8
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 3.7e-98 362.1 260 70.0
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 1.4e-97 360.1 260 69.6
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 1.9e-97 359.8 255 71.4
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 1.9e-97 359.8 260 69.2
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 1.6e-96 356.7 261 68.2
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 1.0e-95 354.0 262 69.8
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 5.1e-95 351.7 261 68.2
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 6.6e-95 351.3 261 67.8
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 1.5e-94 350.1 260 68.8
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 1.6e-93 346.7 261 67.8
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 6.8e-92 341.3 262 64.9
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.3e-90 337.0 262 63.7
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 8.4e-90 334.3 247 68.4
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 3.2e-89 332.4 261 66.3
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.2e-88 330.5 262 63.0
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 2.1e-88 329.7 261 65.5
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 2.7e-88 329.3 262 66.0
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 4.6e-88 328.6 262 64.9
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 1.3e-87 327.0 262 64.1
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 2.5e-86 322.8 262 63.4
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 7.3e-86 321.2 263 61.6
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 7.3e-86 321.2 264 61.4
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 1.6e-85 320.1 262 62.2
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 8.1e-85 317.8 263 61.6
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 1.1e-84 317.4 254 63.0
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 1.8e-84 316.6 248 66.9
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 6.8e-84 314.7 261 59.8
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 8.9e-84 314.3 248 64.1
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 6.4e-82 308.1 262 58.4
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 6.4e-82 308.1 264 59.5
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 1.4e-81 307.0 260 59.6
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 7.1e-81 304.7 264 58.7
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 9.3e-81 304.3 260 59.6
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 9.3e-81 304.3 259 61.4
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 4.6e-80 302.0 260 58.5
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.9e-78 296.6 262 56.9
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 3.3e-78 295.8 259 58.7
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 3.3e-78 295.8 261 57.5
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 1.6e-77 293.5 248 59.3
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 6.2e-77 291.6 268 60.1
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 1.1e-76 290.8 260 57.7
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.4e-76 290.4 264 55.3
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 3.1e-76 289.3 264 58.0
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 5.3e-76 288.5 273 54.9
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 6.9e-76 288.1 262 57.3
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.2e-75 287.3 261 57.1
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 1.5e-75 287.0 251 56.6
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 6.4e-74 281.6 261 53.3
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 1.1e-73 280.8 259 57.1
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 9.3e-73 277.7 262 54.6
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 1.2e-72 277.3 201 69.7
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 1.5e-70 270.4 261 55.2
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.9e-70 270.0 262 52.3
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 9.6e-70 267.7 261 54.4
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 6.2e-69 265.0 249 53.4
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 1.1e-68 264.2 264 52.3
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 1.8e-68 263.5 249 55.0
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 1.5e-67 260.4 199 66.3
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 2.6e-67 259.6 203 62.6
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 3.2e-65 252.7 256 50.4
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 3.2e-65 252.7 262 51.9
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 1.0e-63 247.7 254 50.8
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 1.3e-63 247.3 256 50.0
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.8e-63 246.9 264 49.6
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 2.3e-63 246.5 262 47.3
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 3.0e-63 246.1 264 48.9
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 3.0e-63 246.1 254 50.8
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 1.3e-61 240.7 265 51.7
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 1.6e-61 240.4 254 49.2
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 2.1e-61 240.0 256 49.2
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 2.4e-60 236.5 254 49.2
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 1.5e-59 233.8 254 47.6
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 7.6e-59 231.5 248 52.0
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 1.1e-57 227.6 165 69.7
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 2.5e-57 226.5 254 47.2
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 5.1e-55 218.8 303 43.9
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 8.7e-55 218.0 250 47.6
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 3.3e-54 216.1 254 44.9
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 2.5e-49 199.9 266 44.0
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 1.2e-48 197.6 265 41.1
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 4.1e-44 182.6 132 67.4
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 1.5e-43 180.6 263 41.4
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 5.9e-43 178.7 143 64.3
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 1.9e-33 147.1 266 36.8
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 9.4e-33 144.8 140 54.3
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 1.2e-32 144.4 261 36.8
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 1.8e-31 140.6 266 35.7
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 8.8e-31 138.3 263 36.1
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 4.4e-30 136.0 261 36.0
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 5.7e-30 135.6 150 52.0
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.7e-26 124.0 148 45.9
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 8.5e-26 121.7 105 59.0
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 1.5e-25 120.9 266 33.1
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 8.0e-24 115.2 264 32.2
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.5e-22 110.9 114 54.4
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 2.7e-19 100.1 321 28.0
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 1.9e-17 94.0 97 50.5
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 1.0e-07 61.6 60 50.0


User provided reference genes

Program Settings