Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.170 Carica papaya HOM05D008548 ORTHO05D010565 5.9e-62 240.7 126 100.0
Thecc.02G322600 Theobroma cacao HOM05D008548 ORTHO05D010565 3.2e-15 85.5 136 49.3
Duzib251G0541 Durio zibethinus HOM05D008548 ORTHO05D010565 9.3e-15 84.0 136 49.3
Gohir.A13G088200 Gossypium hirsutum HOM05D008548 ORTHO05D010565 3.5e-14 82.0 136 50.0
Gohir.D13G085600 Gossypium hirsutum HOM05D008548 ORTHO05D010565 1.0e-13 80.5 137 46.7
Gorai.013G097500 Gossypium raimondii HOM05D008548 ORTHO05D010565 1.0e-13 80.5 137 46.7
Duzib248G0997 Durio zibethinus HOM05D008548 ORTHO05D010565 1.9e-12 76.3 135 45.9
Potri.010G138001 Populus trichocarpa HOM05D008548 ORTHO05D010565 3.3e-12 75.5 143 38.5
TWI79G1579 Tripterygium wilfordii HOM05D008548 ORTHO05D010565 7.4e-12 74.3 136 45.6
Manes.14G090400 Manihot esculenta HOM05D008548 ORTHO05D010565 1.3e-11 73.6 90 50.0
Manes.06G079400 Manihot esculenta HOM05D008548 ORTHO05D010565 3.6e-11 72.0 56 64.3
QL03p073326 Quercus lobata HOM05D008548 ORTHO05D010565 3.6e-11 72.0 142 40.1
Glyma.01G065000 Glycine max HOM05D008548 ORTHO05D010565 4.8e-11 71.6 140 40.0
Gorai.005G147800 Gossypium raimondii HOM05D008548 ORTHO05D010565 8.1e-11 70.9 121 44.6
Gohir.A03G106700 Gossypium hirsutum HOM05D008548 ORTHO05D010565 1.8e-10 69.7 121 43.0
Medtr5g048090 Medicago truncatula HOM05D008548 ORTHO05D010565 2.4e-10 69.3 128 39.8
CiPaw.06G095100 Carya illinoinensis HOM05D008548 ORTHO05D010565 5.3e-10 68.2 135 40.7
Rhsim09G0122000 Rhododendron simsii HOM05D008548 ORTHO05D010565 5.3e-10 68.2 140 42.1
Haze_11858 Corylus avellana HOM05D003025 ORTHO05D003305 6.9e-10 67.8 91 48.4
Lj2g0005577 Lotus japonicus HOM05D008548 ORTHO05D010565 6.9e-10 67.8 140 40.0
Prupe.1G293600 Prunus persica HOM05D008548 ORTHO05D010565 9.0e-10 67.4 145 35.9
DCAR_026688 Daucus carota HOM05D008548 ORTHO05D010565 7.6e-09 64.3 52 65.4
Glyma.02G122800 Glycine max HOM05D008548 ORTHO05D010565 7.6e-09 64.3 140 36.4
Nn3g17542 Nelumbo nucifera HOM05D008548 ORTHO05D010565 7.6e-09 64.3 127 38.6
Sabra08G0084500 Salix brachista HOM05D008548 ORTHO05D010565 1.3e-08 63.5 90 44.4
Phvul.003G038200 Phaseolus vulgaris HOM05D008548 ORTHO05D010565 2.2e-08 62.8 144 39.6
Psat2g090800 Pisum sativum HOM05D008548 ORTHO05D010565 2.2e-08 62.8 85 41.2
CiPaw.05G121500 Carya illinoinensis HOM05D008548 ORTHO05D010565 2.9e-08 62.4 144 37.5
Ciclev10033730m.g Citrus clementina HOM05D008548 ORTHO05D010565 2.9e-08 62.4 135 36.3
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 4.9e-08 61.6 90 46.7
CsaV3_5G033480 Cucumis sativus L. HOM05D024428 ORTHO05D025076 6.4e-08 61.2 122 40.2
VMungo1215G2679 Vigna mungo HOM05D008548 ORTHO05D010565 6.4e-08 61.2 140 37.9
PGR119G2115 Punica granatum HOM05D008548 ORTHO05D010565 8.4e-08 60.8 131 39.7
TPR.G38502 Trifolium pratense HOM05D008548 ORTHO05D010565 1.1e-07 60.5 101 37.6
ClCG05G023540 Citrullus lanatus HOM05D024428 ORTHO05D025076 3.2e-07 58.9 132 38.6
Lalb_Chr10g0099171 Lupinus albus HOM05D008548 ORTHO05D010565 3.2e-07 58.9 138 34.1
vmacro01297 Vaccinium macrocarpon HOM05D008548 ORTHO05D010565 3.2e-07 58.9 67 47.8
Sopen05g006580 Solanum pennellii HOM05D001549 ORTHO05D003098 4.2e-07 58.5 86 46.5
MELO3C012168.2 Cucumis melo HOM05D024428 ORTHO05D025076 7.1e-07 57.8 131 38.2
Rhsim12G0071200 Rhododendron simsii HOM05D008548 ORTHO05D010565 9.3e-07 57.4 54 59.3
Sed0002945 Sechium edule HOM05D024428 ORTHO05D025076 9.3e-07 57.4 126 34.9
Aqoxy3G00550 Aquilegia oxysepala HOM05D008548 ORTHO05D010565 1.6e-06 56.6 85 38.8
Solyc05g011825.2 Solanum lycopersicum HOM05D008548 ORTHO05D010565 1.6e-06 56.6 82 43.9
PGSC0003DMG400019660 Solanum tuberosum HOM05D008548 ORTHO05D010565 2.7e-06 55.8 47 55.3
arahy.Tifrunner.gnm1.ann1.R5LUMW Arachis hypogaea HOM05D008548 ORTHO05D010565 6.0e-06 54.7 145 36.6
CANSAT64G1261 Cannabis sativa HOM05D008548 ORTHO05D010565 6.0e-06 54.7 140 35.7


User provided reference genes

Program Settings