Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.169 Carica papaya HOM05D003025 ORTHO05D003305 3.1e-199 698.4 381 100.0
Duzib248G1661 Durio zibethinus HOM05D003025 ORTHO05D003305 1.3e-40 171.4 334 41.3
COL.COLO4_27800 Corchorus olitorius HOM05D003025 ORTHO05D003305 1.7e-40 171.0 340 36.8
Thecc.02G322700 Theobroma cacao HOM05D003025 ORTHO05D003305 3.9e-40 169.9 373 41.8
Gorai.013G097400 Gossypium raimondii HOM05D003025 ORTHO05D003305 2.5e-39 167.2 366 36.9
Gohir.A03G106600 Gossypium hirsutum HOM05D003025 ORTHO05D003305 7.3e-39 165.6 357 38.1
Gohir.D13G085500 Gossypium hirsutum HOM05D003025 ORTHO05D003305 7.3e-39 165.6 366 36.9
Gorai.005G147700 Gossypium raimondii HOM05D003025 ORTHO05D003305 1.3e-38 164.9 359 37.0
Gohir.D02G131800 Gossypium hirsutum HOM05D003025 ORTHO05D003305 2.4e-37 160.6 359 36.8
Gohir.A13G088100 Gossypium hirsutum HOM05D003025 ORTHO05D003305 7.6e-36 155.6 353 34.3
Manes.14G090300 Manihot esculenta HOM05D003025 ORTHO05D003305 1.6e-33 147.9 358 34.6
Haze_11858 Corylus avellana HOM05D003025 ORTHO05D003305 8.7e-32 142.1 428 36.0
Duzib251G0179 Durio zibethinus HOM05D003025 ORTHO05D003305 2.5e-31 140.6 337 40.7
Ciclev10031644m.g Citrus clementina HOM05D003025 ORTHO05D003305 3.6e-30 136.7 338 38.8
Potri.008G111800 Populus trichocarpa HOM05D003025 ORTHO05D003305 4.0e-29 133.3 351 31.6
TWI31G1177 Tripterygium wilfordii HOM05D003025 ORTHO05D003305 4.0e-29 133.3 333 30.0
TAR622G0187 Trochodendron aralioides HOM05D003025 ORTHO05D003305 4.5e-28 129.8 343 33.8
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 6.4e-27 125.9 423 34.8
Sabra10G0106400 Salix brachista HOM05D003025 ORTHO05D003305 4.6e-25 119.8 207 39.1
Atru.chr11.1558 Acer truncatum HOM05D003025 ORTHO05D003305 3.0e-24 117.1 219 40.2
TWI79G0747 Tripterygium wilfordii HOM05D003025 ORTHO05D003305 1.1e-23 115.2 340 29.1
CiPaw.05G121600 Carya illinoinensis HOM05D003025 ORTHO05D003305 4.3e-23 113.2 341 30.5
Prupe.1G293500 Prunus persica HOM05D003025 ORTHO05D003305 7.4e-23 112.5 210 37.6
Potri.010G138100 Populus trichocarpa HOM05D003025 ORTHO05D003305 9.6e-23 112.1 389 29.3
Gorai.008G175400 Gossypium raimondii HOM05D003025 ORTHO05D003305 2.1e-22 110.9 347 32.3
CiPaw.06G095000 Carya illinoinensis HOM05D003025 ORTHO05D003305 2.4e-21 107.5 205 37.6
Gohir.D12G162800 Gossypium hirsutum HOM05D003025 ORTHO05D003305 3.1e-21 107.1 353 31.4
MELO3C012167.2 Cucumis melo HOM05D003025 ORTHO05D003305 6.9e-21 105.9 406 28.1
Gohir.A12G159500 Gossypium hirsutum HOM05D003025 ORTHO05D003305 1.5e-20 104.8 353 30.3
TAR374G0527 Trochodendron aralioides HOM05D003025 ORTHO05D003305 1.5e-20 104.8 347 30.0
CSS0010260 Camellia sinensis var. sinensis HOM05D003025 ORTHO05D003305 3.4e-20 103.6 371 25.9
Sabra08G0084400 Salix brachista HOM05D003025 ORTHO05D003305 7.6e-20 102.4 390 29.7
FAN22G0063 Fragaria x ananassa HOM05D003025 ORTHO05D003305 1.0e-19 102.1 204 34.8
Nn4g23540 Nelumbo nucifera HOM05D003025 ORTHO05D003305 1.0e-19 102.1 350 30.0
FAN07G1412 Fragaria x ananassa HOM05D003025 ORTHO05D003305 1.3e-19 101.7 204 35.3
GSVIVG01010102001 Vitis vinifera HOM05D003025 ORTHO05D003305 1.3e-19 101.7 347 29.7
FAN17G1716 Fragaria x ananassa HOM05D003025 ORTHO05D003305 1.7e-19 101.3 204 34.8
Manes.06G079500 Manihot esculenta HOM05D003025 ORTHO05D003305 1.7e-19 101.3 340 32.4
MD16G1055400 Malus domestica HOM05D003025 ORTHO05D003305 2.9e-19 100.5 197 36.0
MD13G1056500 Malus domestica HOM05D003025 ORTHO05D003305 1.1e-18 98.6 174 36.8
FvH4_4g29290 Fragaria vesca HOM05D003025 ORTHO05D003305 1.9e-18 97.8 204 34.8
RcHm_v2.0_Chr4g0437341 Rosa chinensis HOM05D003025 ORTHO05D003305 1.2e-17 95.1 198 35.9
Aa31LG2G6910 Aethionema arabicum HOM05D003025 ORTHO05D003305 3.5e-17 93.6 190 38.4
ClCG05G023550 Citrullus lanatus HOM05D003025 ORTHO05D003305 6.0e-17 92.8 205 35.1
Sed0017206 Sechium edule HOM05D003025 ORTHO05D003305 6.0e-17 92.8 204 35.3
CANSAT64G2528 Cannabis sativa HOM05D003025 ORTHO05D003305 1.3e-16 91.7 318 31.1
FAN12G3072 Fragaria x ananassa HOM05D003025 ORTHO05D003305 1.3e-16 91.7 197 34.0
CARHR146220 Cardamine hirsuta HOM05D003025 ORTHO05D003305 1.8e-16 91.3 184 37.0
CsaV3_5G033470 Cucumis sativus L. HOM05D003025 ORTHO05D003305 1.9e-15 87.8 111 43.2
Sp2g14630 Schrenkiella parvula HOM05D003025 ORTHO05D003305 1.9e-15 87.8 214 32.7
Thhalv10004181m.g Eutrema salsugineum HOM05D003025 ORTHO05D003305 5.7e-15 86.3 116 44.8
BraA06t27196Z Brassica rapa HOM05D003025 ORTHO05D003305 1.3e-14 85.1 161 36.6
Carub.0005s0297 Capsella rubella HOM05D003025 ORTHO05D003305 1.3e-14 85.1 225 33.3
BcaB07g30644 Brassica carinata HOM05D003025 ORTHO05D003305 1.6e-14 84.7 189 29.1
Dinv34020 Davidia involucrata HOM05D003025 ORTHO05D003305 2.8e-14 84.0 215 33.5
AT2G03810 Arabidopsis thaliana HOM05D003025 ORTHO05D003305 4.8e-14 83.2 196 33.2
A06p42840 Brassica napus HOM05D003025 ORTHO05D003305 6.2e-14 82.8 158 36.7
AL5G13600 Arabidopsis lyrata HOM05D003025 ORTHO05D003305 1.1e-13 82.0 233 30.0
Sed0016639 Sechium edule HOM05D003025 ORTHO05D003305 1.1e-13 82.0 356 27.5
BraA09t38060Z Brassica rapa HOM05D003025 ORTHO05D003305 2.4e-13 80.9 73 50.7
C09p31660 Brassica napus HOM05D003025 ORTHO05D003305 3.1e-13 80.5 184 31.0
BolC9t56021H Brassica oleracea HOM05D003025 ORTHO05D003305 3.1e-13 80.5 184 31.0
Actinidia19904 Actinidia chinensis HOM05D003025 ORTHO05D003305 5.3e-13 79.7 57 57.9
BolC7t43953H Brassica oleracea HOM05D003025 ORTHO05D003305 6.9e-13 79.3 193 34.7
Actinidia13406 Actinidia chinensis HOM05D003025 ORTHO05D003305 3.4e-12 77.0 188 31.4
BcaC04g21446 Brassica carinata HOM05D003025 ORTHO05D003305 3.4e-12 77.0 208 29.3
THA.LOC104824052 Tarenaya hassleriana HOM05D003025 ORTHO05D003305 7.6e-12 75.9 378 25.4
BcaC06g31142 Brassica carinata HOM05D003025 ORTHO05D003305 1.0e-11 75.5 193 32.1
THA.LOC104805213 Tarenaya hassleriana HOM05D003025 ORTHO05D003305 1.0e-11 75.5 73 53.4
vmacro10474 Vaccinium macrocarpon HOM05D003025 ORTHO05D003305 1.3e-11 75.1 46 71.7
Lj6A773T133 Lonicera japonica HOM05D003025 ORTHO05D003305 2.2e-11 74.3 158 31.0
Glyma.01G064900 Glycine max HOM05D003025 ORTHO05D003305 2.9e-11 73.9 65 58.5
Dinv15582 Davidia involucrata HOM05D003025 ORTHO05D003305 5.0e-11 73.2 342 26.6
Solyc05g011830.4 Solanum lycopersicum HOM05D003025 ORTHO05D003305 5.0e-11 73.2 151 33.8
PSO782G5508 Papaver somniferum HOM05D003025 ORTHO05D003305 6.5e-11 72.8 122 36.9
Rhsim09G0122100 Rhododendron simsii HOM05D003025 ORTHO05D003305 6.5e-11 72.8 88 46.6
A09p24740 Brassica napus HOM05D003025 ORTHO05D003305 1.9e-10 71.2 209 28.2
Lj3A1027T87 Lonicera japonica HOM05D003025 ORTHO05D003305 2.5e-10 70.9 153 28.8
PSO063G1603 Papaver somniferum HOM05D003025 ORTHO05D003305 3.2e-10 70.5 366 26.2
MSTRG.13475 Avicennia marina HOM05D003025 ORTHO05D003305 5.5e-10 69.7 208 31.2
PGSC0003DMG400025716 Solanum tuberosum HOM05D003025 ORTHO05D003305 5.5e-10 69.7 51 58.8
MSTRG.780 Avicennia marina HOM05D003025 ORTHO05D003305 9.3e-10 68.9 194 30.4
CSS0010060 Camellia sinensis var. sinensis HOM05D003025 ORTHO05D003305 1.2e-09 68.6 184 28.8
Phvul.003G280500 Phaseolus vulgaris HOM05D003025 ORTHO05D003305 1.2e-09 68.6 104 40.4
Rhsim12G0071300 Rhododendron simsii HOM05D003025 ORTHO05D003305 1.2e-09 68.6 96 40.6
Actinidia31928 Actinidia chinensis HOM05D003025 ORTHO05D003305 1.6e-09 68.2 157 29.9
HanXRQChr08g0215591 Helianthus annuus HOM05D003025 ORTHO05D003305 3.5e-09 67.0 52 53.8
PGSC0003DMG400001936 Solanum tuberosum HOM05D003025 ORTHO05D003305 6.1e-09 66.2 49 55.1
Hma1.2p1_0428F.1_g150820 Hydrangea macrophylla HOM05D003025 ORTHO05D003305 1.0e-08 65.5 368 24.5
MBI14_g31150_MAGBIO Magnolia biondii HOM05D003025 ORTHO05D003305 1.0e-08 65.5 388 23.7
arahy.Tifrunner.gnm1.ann1.8UFH9N Arachis hypogaea HOM05D003025 ORTHO05D003305 3.0e-08 63.9 206 33.5
BcaB03g16265 Brassica carinata HOM05D003025 ORTHO05D003305 3.9e-08 63.5 52 53.8
HanXRQChr12g0365071 Helianthus annuus HOM05D003025 ORTHO05D003305 3.9e-08 63.5 49 55.1
Nitab4.5_0001196g0010 Nicotiana tabacum HOM05D003025 ORTHO05D003305 3.9e-08 63.5 80 41.2
Nitab4.5_0009153g0010 Nicotiana tabacum HOM05D003025 ORTHO05D003305 3.9e-08 63.5 324 26.2
TPR.G38556 Trifolium pratense HOM05D003025 ORTHO05D003305 3.9e-08 63.5 176 31.2
Medtr5g047930 Medicago truncatula HOM05D003025 ORTHO05D003305 5.1e-08 63.2 170 30.0
Sopen05g006590 Solanum pennellii HOM05D003025 ORTHO05D003305 5.1e-08 63.2 346 26.0
vmacro01298 Vaccinium macrocarpon HOM05D003025 ORTHO05D003305 5.1e-08 63.2 106 34.0
ECA246G4035 Erigeron canadensis HOM05D003025 ORTHO05D003305 8.7e-08 62.4 151 33.1
Actinidia07767 Actinidia chinensis HOM05D003025 ORTHO05D003305 1.1e-07 62.0 210 30.0
Aqoxy3G03750 Aquilegia oxysepala HOM05D003025 ORTHO05D003305 1.1e-07 62.0 57 56.1
VMungo1215G0401 Vigna mungo HOM05D003025 ORTHO05D003305 1.1e-07 62.0 199 30.2
Carub.0001s1338 Capsella rubella HOM05D003025 ORTHO05D003305 1.9e-07 61.2 178 30.9
ECA233G1104 Erigeron canadensis HOM05D003025 ORTHO05D003305 2.5e-07 60.8 48 56.2
Solyc04g005290.3 Solanum lycopersicum HOM05D003025 ORTHO05D003305 2.5e-07 60.8 182 29.7
DCAR_030058 Daucus carota HOM05D003025 ORTHO05D003305 3.3e-07 60.5 357 24.1
Nitab4.5_0003339g0090 Nicotiana tabacum HOM05D003025 ORTHO05D003305 3.3e-07 60.5 80 38.8
arahy.Tifrunner.gnm1.ann1.161SS5 Arachis hypogaea HOM05D003025 ORTHO05D003305 7.4e-07 59.3 209 33.0
Lj2g0017874 Lotus japonicus HOM05D003025 ORTHO05D003305 9.7e-07 58.9 208 30.3
BcaC03g17244 Brassica carinata HOM05D003025 ORTHO05D003305 1.3e-06 58.5 112 35.7
ClCG08G010610 Citrullus lanatus HOM05D003025 ORTHO05D003305 1.3e-06 58.5 343 26.2
MELO3C011401.2 Cucumis melo HOM05D003025 ORTHO05D003305 1.3e-06 58.5 190 29.5
Psat2g085960 Pisum sativum HOM05D003025 ORTHO05D003305 1.3e-06 58.5 101 35.6
BcaB02g06463 Brassica carinata HOM05D003025 ORTHO05D003305 1.6e-06 58.2 160 31.9
Sc11g0002650 Simmondsia chinensis HOM05D003025 ORTHO05D003305 2.8e-06 57.4 49 55.1
Sopen04g001270 Solanum pennellii HOM05D003025 ORTHO05D003305 2.8e-06 57.4 195 28.7
THA.LOC104801838 Tarenaya hassleriana HOM05D003025 ORTHO05D003305 2.8e-06 57.4 50 50.0
Oeu003749.3 Olea europaea HOM05D003025 ORTHO05D003305 3.7e-06 57.0 210 25.7
Ca_05068_v3 Cicer arietinum L. HOM05D003025 ORTHO05D003305 4.8e-06 56.6 202 30.2
ECA234G4845 Erigeron canadensis HOM05D003025 ORTHO05D003305 6.3e-06 56.2 110 31.8
Oeu055083.2 Olea europaea HOM05D003025 ORTHO05D003305 6.3e-06 56.2 229 24.9


User provided reference genes

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