Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc0.8 Carica papaya HOM05D000014 ORTHO05D000016 2.2e-48 195.3 96 100.0
Oeu021836.2 Olea europaea HOM05D000014 ORTHO05D000016 1.5e-17 92.8 81 55.6
Atru.chr12.2468 Acer truncatum HOM05D000014 ORTHO05D000016 1.7e-16 89.4 78 56.4
Oeu034030.1 Olea europaea HOM05D000014 ORTHO05D000016 3.7e-16 88.2 84 52.4
Oeu047983.1 Olea europaea HOM05D000014 ORTHO05D000016 3.7e-16 88.2 84 50.0
CANSAT80G1312 Cannabis sativa HOM05D000014 ORTHO05D000016 6.4e-16 87.4 82 54.9
CANSAT78G2394 Cannabis sativa HOM05D000014 ORTHO05D000016 4.1e-15 84.7 82 53.7
Oeu025149.1 Olea europaea HOM05D000014 ORTHO05D000016 1.2e-14 83.2 84 50.0
CANSAT56G0185 Cannabis sativa HOM05D000014 ORTHO05D000016 1.6e-14 82.8 83 51.8
CANSAT01G0424 Cannabis sativa HOM05D000014 ORTHO05D000016 3.5e-14 81.6 82 52.4
CANSAT25G3548 Cannabis sativa HOM05D000014 ORTHO05D000016 3.5e-14 81.6 83 50.6
CANSAT80G0554 Cannabis sativa HOM05D000014 ORTHO05D000016 3.5e-14 81.6 82 50.0
Oeu017629.1 Olea europaea HOM05D000014 ORTHO05D000016 3.5e-14 81.6 84 48.8
Oeu012344.1 Olea europaea HOM05D000014 ORTHO05D000016 4.6e-14 81.3 84 48.8
PGR004G2403 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
PGR013G0002 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
PGR026G0002 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
PGR031G1008 Punica granatum HOM05D000014 ORTHO05D000093 4.6e-14 81.3 77 53.2
PGR031G1161 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
PGR031G1474 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
PGR031G2833 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
PGR031G3309 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
PGR042G0004 Punica granatum HOM05D000014 ORTHO05D000093 4.6e-14 81.3 77 53.2
PGR042G2691 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
PGR102G0067 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
PGR102G0138 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
PGR102G0846 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
PGR102G1143 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
PGR142G0256 Punica granatum HOM05D000014 ORTHO05D000093 4.6e-14 81.3 77 53.2
PGR142G0407 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
PGR142G1132 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
PGR142G2478 Punica granatum HOM05D000014 ORTHO05D000016 4.6e-14 81.3 77 53.2
Oeu017422.1 Olea europaea HOM05D000014 ORTHO05D000016 6.0e-14 80.9 84 50.0
Oeu007323.1 Olea europaea HOM05D000014 ORTHO05D000016 1.3e-13 79.7 84 47.6
PGR031G1363 Punica granatum HOM05D000014 ORTHO05D000093 1.7e-13 79.3 77 51.9
CANSAT01G0105 Cannabis sativa HOM05D000014 ORTHO05D000016 2.3e-13 79.0 83 48.2
TWI15G0694 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 3.0e-13 78.6 84 41.7
Oeu009768.1 Olea europaea HOM05D000014 ORTHO05D000016 3.9e-13 78.2 89 44.9
Oeu055875.1 Olea europaea HOM05D000014 ORTHO05D000016 3.9e-13 78.2 84 48.8
Oeu054243.1 Olea europaea HOM05D000014 ORTHO05D000016 5.1e-13 77.8 84 46.4
Oeu050542.1 Olea europaea HOM05D000014 ORTHO05D000016 1.5e-12 76.3 85 48.2
PGR083G0640 Punica granatum HOM05D000014 ORTHO05D000016 3.3e-12 75.1 77 50.6
Oeu002512.1 Olea europaea HOM05D000014 ORTHO05D000016 4.3e-12 74.7 84 46.4
CANSAT11G1067 Cannabis sativa HOM05D000014 ORTHO05D000016 5.6e-12 74.3 76 51.3
Oeu053640.1 Olea europaea HOM05D000014 ORTHO05D000016 5.6e-12 74.3 85 45.9
Oeu064136.1 Olea europaea HOM05D000014 ORTHO05D000016 5.6e-12 74.3 90 43.3
Cpa.g.sc60.73 Carica papaya HOM05D030452 ORTHO05D000016 1.6e-11 72.8 90 43.3
Medtr0029s0220 Medicago truncatula HOM05D029435 ORTHO05D000016 1.6e-11 72.8 83 38.6
CANSAT21G1138 Cannabis sativa HOM05D000014 ORTHO05D000016 2.8e-11 72.0 63 57.1
AUR62031796 Chenopodium quinoa HOM05D000014 ORTHO05D000016 6.2e-11 70.9 78 47.4
AUR62036886 Chenopodium quinoa HOM05D000014 ORTHO05D000016 6.2e-11 70.9 77 48.1
Cpa.g.sc4.147 Carica papaya HOM05D000014 ORTHO05D000016 8.1e-11 70.5 72 48.6
CANSAT11G2047 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-10 70.1 61 50.8
AUR62014202 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.1e-10 70.1 70 48.6
PGR042G3031 Punica granatum HOM05D000014 ORTHO05D000016 2.4e-10 68.9 60 55.0
Thecc.06G051900 Theobroma cacao HOM05D000014 ORTHO05D000016 2.4e-10 68.9 76 50.0
Medtr0060s0110 Medicago truncatula HOM05D008802 ORTHO05D000016 4.0e-10 68.2 78 41.0
Cpa.g.sc4.33 Carica papaya HOM05D000014 ORTHO05D000016 5.2e-10 67.8 89 46.1
AUR62039883 Chenopodium quinoa HOM05D000014 ORTHO05D000016 5.2e-10 67.8 77 46.8
AUR62039888 Chenopodium quinoa HOM05D000014 ORTHO05D000016 5.2e-10 67.8 77 46.8
Atru.chr2.2726 Acer truncatum HOM05D000014 ORTHO05D000016 6.8e-10 67.4 83 42.2
Atru.chr2.557 Acer truncatum HOM05D000014 ORTHO05D000016 6.8e-10 67.4 80 43.8
Thecc.01G254100 Theobroma cacao HOM05D000014 ORTHO05D000016 6.8e-10 67.4 65 50.8
AUR62022087 Chenopodium quinoa HOM05D000014 ORTHO05D000016 8.9e-10 67.0 77 45.5
Medtr0012s0240 Medicago truncatula HOM05D008054 ORTHO05D000016 8.9e-10 67.0 78 42.3
Medtr0042s0120 Medicago truncatula HOM05D008054 ORTHO05D010196 2.0e-09 65.9 78 41.0
AUR62026440 Chenopodium quinoa HOM05D000014 ORTHO05D000016 3.4e-09 65.1 78 43.6
Oeu039483.1 Olea europaea HOM05D000014 ORTHO05D000016 3.4e-09 65.1 73 45.2
Cpa.g.sc1265.1 Carica papaya HOM05D000014 ORTHO05D000016 4.4e-09 64.7 67 50.7
AUR62035174 Chenopodium quinoa HOM05D000014 ORTHO05D000016 4.4e-09 64.7 77 44.2
Manes.04G127160 Manihot esculenta HOM05D000014 ORTHO05D000016 5.8e-09 64.3 83 41.0
Manes.07G015250 Manihot esculenta HOM05D000014 ORTHO05D000016 5.8e-09 64.3 68 45.6
CANSAT01G1394 Cannabis sativa HOM05D000014 ORTHO05D000016 7.6e-09 63.9 93 36.6
Oeu055441.1 Olea europaea HOM05D000014 ORTHO05D000016 7.6e-09 63.9 101 32.7
Oeu003156.1 Olea europaea HOM05D000014 ORTHO05D000016 1.3e-08 63.2 101 32.7
CANSAT78G2236 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-08 62.8 88 37.5
AUR62041101 Chenopodium quinoa HOM05D000014 ORTHO05D000016 2.9e-08 62.0 75 42.7
Medtr8g464510 Medicago truncatula HOM05D008054 ORTHO05D000016 2.9e-08 62.0 75 40.0
Ah.13g070800 Amaranthus hybridus HOM05D000014 ORTHO05D000016 3.8e-08 61.6 62 41.9
ClCG04G001460 Citrullus lanatus HOM05D000014 ORTHO05D000016 4.9e-08 61.2 77 41.6
Oeu040630.1 Olea europaea HOM05D000014 ORTHO05D000016 4.9e-08 61.2 82 37.8
Oeu005253.1 Olea europaea HOM05D000014 ORTHO05D000016 6.4e-08 60.8 82 37.8
Oeu044885.1 Olea europaea HOM05D000014 ORTHO05D000016 6.4e-08 60.8 100 33.0
Medtr1058s0010 Medicago truncatula HOM05D008054 ORTHO05D010196 8.4e-08 60.5 70 40.0
Medtr2g043690 Medicago truncatula HOM05D008054 ORTHO05D010196 8.4e-08 60.5 72 40.3
Medtr6g078050 Medicago truncatula HOM05D008054 ORTHO05D000016 1.1e-07 60.1 64 40.6
Oeu028566.1 Olea europaea HOM05D000014 ORTHO05D000016 1.1e-07 60.1 85 35.3
CANSAT11G1900 Cannabis sativa HOM05D000014 ORTHO05D000016 1.4e-07 59.7 88 36.4
Oeu008542.1 Olea europaea HOM05D000014 ORTHO05D000016 1.4e-07 59.7 79 36.7
Oeu029956.1 Olea europaea HOM05D000014 ORTHO05D000016 1.4e-07 59.7 101 32.7
Medtr0091s0050 Medicago truncatula HOM05D008054 ORTHO05D000016 1.9e-07 59.3 61 42.6
Oeu037154.1 Olea europaea HOM05D000014 ORTHO05D000016 1.9e-07 59.3 82 35.4
Oeu049298.1 Olea europaea HOM05D000014 ORTHO05D000016 1.9e-07 59.3 102 31.4
CANSAT64G1133 Cannabis sativa HOM05D000014 ORTHO05D000016 2.4e-07 58.9 94 34.0
Oeu012869.1 Olea europaea HOM05D000014 ORTHO05D000016 2.4e-07 58.9 101 31.7
Oeu037098.1 Olea europaea HOM05D000014 ORTHO05D000016 2.4e-07 58.9 102 31.4
Oeu064879.1 Olea europaea HOM05D000014 ORTHO05D000016 2.4e-07 58.9 83 34.9
CANSAT01G2243 Cannabis sativa HOM05D000014 ORTHO05D000016 3.2e-07 58.5 59 50.8
Oeu008967.1 Olea europaea HOM05D000014 ORTHO05D000016 3.2e-07 58.5 84 35.7
Oeu053778.1 Olea europaea HOM05D000014 ORTHO05D000016 3.2e-07 58.5 82 35.4
arahy.Tifrunner.gnm1.ann1.6CK6EB Arachis hypogaea HOM05D000014 ORTHO05D000016 4.2e-07 58.2 78 38.5
CANSAT78G0146 Cannabis sativa HOM05D000014 ORTHO05D000016 4.2e-07 58.2 88 36.4
Oeu058259.1 Olea europaea HOM05D000014 ORTHO05D000016 4.2e-07 58.2 99 32.3
EL10Ac7g17431 Beta vulgaris HOM05D000014 ORTHO05D000016 5.4e-07 57.8 89 36.0
CANSAT54G2409 Cannabis sativa HOM05D000014 ORTHO05D000016 5.4e-07 57.8 77 35.1
Thecc.10G045800 Theobroma cacao HOM05D000050 ORTHO05D000016 5.4e-07 57.8 42 69.0
arahy.Tifrunner.gnm1.ann1.B12FQA Arachis hypogaea HOM05D000014 ORTHO05D000016 7.1e-07 57.4 78 38.5
arahy.Tifrunner.gnm1.ann1.CUPE1C Arachis hypogaea HOM05D000014 ORTHO05D000016 7.1e-07 57.4 78 38.5
Oeu031842.1 Olea europaea HOM05D000014 ORTHO05D000016 7.1e-07 57.4 101 30.7
Oeu056292.1 Olea europaea HOM05D000014 ORTHO05D000016 7.1e-07 57.4 79 36.7
Oeu061627.1 Olea europaea HOM05D000014 ORTHO05D000016 7.1e-07 57.4 82 34.1
CANSAT54G1842 Cannabis sativa HOM05D000014 ORTHO05D000016 9.3e-07 57.0 84 41.7
Oeu015202.1 Olea europaea HOM05D000014 ORTHO05D000016 9.3e-07 57.0 84 33.3
Oeu016583.1 Olea europaea HOM05D000014 ORTHO05D000016 9.3e-07 57.0 82 35.4
Oeu034781.1 Olea europaea HOM05D000014 ORTHO05D000016 9.3e-07 57.0 82 34.1
Medtr1g050915 Medicago truncatula HOM05D008054 ORTHO05D010196 1.2e-06 56.6 78 37.2
Oeu011256.1 Olea europaea HOM05D000014 ORTHO05D000016 1.2e-06 56.6 82 35.4
Oeu012789.1 Olea europaea HOM05D000014 ORTHO05D000016 1.2e-06 56.6 84 34.5
Oeu022855.1 Olea europaea HOM05D000014 ORTHO05D000016 1.2e-06 56.6 82 35.4
Oeu063864.1 Olea europaea HOM05D000014 ORTHO05D000016 1.2e-06 56.6 82 34.1
Oeu064583.1 Olea europaea HOM05D000014 ORTHO05D000016 1.2e-06 56.6 82 34.1
CANSAT54G2205 Cannabis sativa HOM05D000014 ORTHO05D000016 1.6e-06 56.2 87 34.5
CANSAT78G1781 Cannabis sativa HOM05D000014 ORTHO05D000016 1.6e-06 56.2 93 33.3
ClCG06G010250 Citrullus lanatus HOM05D000002 ORTHO05D000016 1.6e-06 56.2 77 39.0
Oeu016941.1 Olea europaea HOM05D000014 ORTHO05D000016 1.6e-06 56.2 101 30.7
Oeu031578.1 Olea europaea HOM05D000014 ORTHO05D000016 1.6e-06 56.2 79 35.4
Cpa.g.sc61.8 Carica papaya HOM05D008054 ORTHO05D000016 2.1e-06 55.8 65 43.1
ClCG00G000630 Citrullus lanatus HOM05D000014 ORTHO05D000016 2.1e-06 55.8 80 41.2
Oeu003483.1 Olea europaea HOM05D000014 ORTHO05D000016 2.1e-06 55.8 82 32.9
AUR62041996 Chenopodium quinoa HOM05D014981 ORTHO05D017491 2.7e-06 55.5 78 33.3
ClCG04G003930 Citrullus lanatus HOM05D000014 ORTHO05D000016 2.7e-06 55.5 77 39.0
Medtr0001s0700 Medicago truncatula HOM05D008054 ORTHO05D000016 2.7e-06 55.5 61 41.0
Oeu006869.1 Olea europaea HOM05D000014 ORTHO05D000016 2.7e-06 55.5 82 31.7
Oeu013226.1 Olea europaea HOM05D000014 ORTHO05D000016 2.7e-06 55.5 85 34.1
Oeu048988.1 Olea europaea HOM05D000014 ORTHO05D000016 2.7e-06 55.5 82 32.9
Oeu055783.1 Olea europaea HOM05D000014 ORTHO05D000016 2.7e-06 55.5 82 34.1
Oeu059869.1 Olea europaea HOM05D000014 ORTHO05D000016 2.7e-06 55.5 82 32.9
Oeu064838.1 Olea europaea HOM05D000014 ORTHO05D000016 2.7e-06 55.5 82 34.1
CSS0008445 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 3.5e-06 55.1 83 37.3
AUR62031272 Chenopodium quinoa HOM05D000014 ORTHO05D000016 3.5e-06 55.1 77 37.7
Medtr3g044803 Medicago truncatula HOM05D029435 ORTHO05D000016 3.5e-06 55.1 56 44.6
Oeu028558.1 Olea europaea HOM05D000014 ORTHO05D000016 3.5e-06 55.1 82 32.9
Oeu052862.1 Olea europaea HOM05D000014 ORTHO05D000016 3.5e-06 55.1 100 31.0
Cpa.g.sc82.72 Carica papaya HOM05D000014 ORTHO05D000016 4.6e-06 54.7 77 40.3
Medtr2g460950 Medicago truncatula HOM05D008054 ORTHO05D000016 4.6e-06 54.7 59 42.4
Oeu003673.1 Olea europaea HOM05D000014 ORTHO05D000016 4.6e-06 54.7 82 35.4
Oeu010466.1 Olea europaea HOM05D000014 ORTHO05D000016 4.6e-06 54.7 84 33.3
Oeu020187.1 Olea europaea HOM05D000014 ORTHO05D000016 4.6e-06 54.7 84 33.3
Oeu036155.1 Olea europaea HOM05D000014 ORTHO05D000016 6.0e-06 54.3 82 34.1
ClCG03G010820 Citrullus lanatus HOM05D000014 ORTHO05D000016 7.8e-06 53.9 61 44.3


User provided reference genes

Program Settings