Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 5.7e-32 140.2 66 100.0
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 1.0e-28 129.4 65 89.2
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 1.0e-28 129.4 64 89.1
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 2.2e-28 128.3 65 87.7
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 8.5e-28 126.3 65 87.7
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.5e-27 125.6 62 90.3
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.5e-27 125.6 62 90.3
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.5e-27 125.6 62 90.3
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.5e-27 125.6 62 90.3
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.5e-27 125.6 62 90.3
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.5e-27 125.6 62 90.3
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 2.5e-27 124.8 62 90.3
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 2.5e-27 124.8 64 87.5
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 3.2e-27 124.4 64 89.1
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 4.2e-27 124.0 62 90.3
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 4.2e-27 124.0 62 90.3
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 5.5e-27 123.6 64 87.5
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 7.2e-27 123.2 65 87.7
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 7.2e-27 123.2 65 87.7
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 1.2e-26 122.5 62 88.7
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.6e-26 122.1 62 87.1
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 2.7e-26 121.3 66 83.3
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 3.6e-26 120.9 65 86.2
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 3.6e-26 120.9 64 82.8
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 6.1e-26 120.2 66 80.3
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 6.1e-26 120.2 65 83.1
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 1.0e-25 119.4 65 86.2
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 1.4e-25 119.0 65 81.5
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 1.8e-25 118.6 66 84.8
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 1.8e-25 118.6 65 81.5
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.8e-25 118.6 65 81.5
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 1.8e-25 118.6 64 84.4
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 1.8e-25 118.6 65 84.6
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 1.8e-25 118.6 65 83.1
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 1.8e-25 118.6 65 83.1
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 3.0e-25 117.9 63 85.7
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 4.0e-25 117.5 62 87.1
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 5.2e-25 117.1 65 80.0
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 5.2e-25 117.1 65 80.0
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 8.8e-25 116.3 62 85.5
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 8.8e-25 116.3 65 81.5
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 8.8e-25 116.3 66 81.8
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 1.5e-24 115.5 65 76.9
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 1.5e-24 115.5 61 85.2
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 2.6e-24 114.8 66 78.8
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 2.6e-24 114.8 66 78.8
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 2.6e-24 114.8 65 83.1
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 4.4e-24 114.0 62 83.9
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 5.7e-24 113.6 66 77.3
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 5.7e-24 113.6 66 77.3
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 5.7e-24 113.6 66 77.3
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 5.7e-24 113.6 66 77.3
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 7.5e-24 113.2 62 82.3
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 7.5e-24 113.2 62 82.3
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 7.5e-24 113.2 66 80.3
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 7.5e-24 113.2 66 80.3
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 9.8e-24 112.8 62 82.3
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 1.3e-23 112.5 66 75.8
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 1.3e-23 112.5 66 75.8
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 1.3e-23 112.5 66 75.8
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 1.3e-23 112.5 62 82.3
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 1.7e-23 112.1 66 75.8
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 2.2e-23 111.7 66 74.2
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 87.9
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 2.2e-23 111.7 66 75.8
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 2.2e-23 111.7 66 75.8
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 2.2e-23 111.7 66 75.8
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 84.5
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 2.2e-23 111.7 61 83.6
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 2.8e-23 111.3 66 75.8
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 2.8e-23 111.3 62 82.3
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 2.8e-23 111.3 62 82.3
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 2.8e-23 111.3 61 82.0
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 3.7e-23 110.9 55 90.9
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 6.3e-23 110.2 66 74.2
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 1.1e-22 109.4 62 79.0
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 1.4e-22 109.0 62 80.6
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 1.4e-22 109.0 62 80.6
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 1.8e-22 108.6 61 77.0
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 2.4e-22 108.2 64 78.1
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 3.1e-22 107.8 67 74.6
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 4.1e-22 107.5 66 71.2
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 2.0e-21 105.1 62 75.8
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 4.5e-21 104.0 55 83.6
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 5.9e-21 103.6 62 72.6
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 1.7e-20 102.1 61 73.8
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 1.7e-20 102.1 62 72.6
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 4.2e-19 97.4 62 74.2
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 1.6e-18 95.5 64 62.5
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 2.1e-18 95.1 65 73.8
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 2.8e-18 94.7 65 72.3
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 5.2e-17 90.5 60 68.3
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 5.2e-17 90.5 62 64.5
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 7.5e-16 86.7 44 84.1
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 5.4e-14 80.5 47 74.5
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 1.1e-11 72.8 39 82.1
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 2.8e-10 68.2 36 80.6
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 3.6e-10 67.8 36 83.3
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 3.6e-10 67.8 57 52.6
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 4.7e-10 67.4 36 83.3
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 4.7e-10 67.4 36 83.3
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 6.1e-10 67.0 43 69.8
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 8.0e-10 66.6 36 80.6
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 4.0e-09 64.3 58 48.3
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 4.0e-09 64.3 58 48.3
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 5.8e-08 60.5 53 49.1


User provided reference genes

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