Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc0.66 Carica papaya HOM05D007167 ORTHO05D000922 7.3e-49 196.8 94 100.0
PGSC0003DMG400034963 Solanum tuberosum HOM05D007167 ORTHO05D000922 3.2e-12 75.1 86 55.8
PGSC0003DMG400039430 Solanum tuberosum HOM05D007167 ORTHO05D000922 3.2e-12 75.1 86 55.8
Manes.S055616 Manihot esculenta HOM05D001319 ORTHO05D000922 9.4e-12 73.6 86 51.2
Manes.S030952 Manihot esculenta HOM05D001319 ORTHO05D000922 3.0e-10 68.6 90 46.7
Manes.S024416 Manihot esculenta HOM05D001319 ORTHO05D000922 7.4e-09 63.9 87 49.4
Cre14.g634322 Chlamydomonas reinhardtii HOM05D007167 ORTHO05D000922 9.7e-09 63.5 55 61.8
Cre14.g634365 Chlamydomonas reinhardtii HOM05D007167 ORTHO05D000922 9.7e-09 63.5 55 61.8
Glyma.13G012200 Glycine max HOM05D007167 ORTHO05D000922 1.3e-08 63.2 51 68.6
Glyma.U007802 Glycine max HOM05D001319 ORTHO05D000922 1.3e-08 63.2 51 68.6
Potri.008G224111 Populus trichocarpa HOM05D007167 ORTHO05D000922 1.7e-08 62.8 35 88.6
Sopen00g004060 Solanum pennellii HOM05D001828 ORTHO05D001745 2.2e-08 62.4 42 73.8
Migut.O00649 Erythranthe guttata HOM05D001319 ORTHO05D000922 6.3e-08 60.8 87 46.0
Manes.S008829 Manihot esculenta HOM05D007167 ORTHO05D000922 6.3e-08 60.8 35 82.9
Manes.S055516 Manihot esculenta HOM05D007167 ORTHO05D000922 6.3e-08 60.8 35 82.9
Manes.S056016 Manihot esculenta HOM05D007167 ORTHO05D000922 6.3e-08 60.8 35 82.9
Potri.008G224701 Populus trichocarpa HOM05D007167 ORTHO05D000922 8.2e-08 60.5 31 93.5
unitig_813.g34371 Utricularia gibba HOM05D007167 ORTHO05D000922 1.4e-07 59.7 43 69.8
Sopen00g007010 Solanum pennellii HOM05D007167 ORTHO05D000922 3.1e-07 58.5 53 64.2
Thhalv10028274m.g Eutrema salsugineum HOM05D001319 ORTHO05D000922 4.1e-07 58.2 42 71.4
Lj2g0014759 Lotus japonicus HOM05D001319 ORTHO05D000922 4.1e-07 58.2 40 77.5
Lj6g0022573 Lotus japonicus HOM05D001319 ORTHO05D000922 4.1e-07 58.2 40 77.5
LjContig00006g0020595 Lotus japonicus HOM05D001319 ORTHO05D000922 4.1e-07 58.2 40 77.5
LjContig00488g0020088 Lotus japonicus HOM05D001319 ORTHO05D000922 4.1e-07 58.2 40 77.5
BcaB04g16894 Brassica carinata HOM05D001319 ORTHO05D000922 5.3e-07 57.8 31 90.3
BcaNung07382 Brassica carinata HOM05D000920 ORTHO05D000922 5.3e-07 57.8 31 90.3
A06p26520 Brassica napus HOM05D007167 ORTHO05D000922 5.3e-07 57.8 31 90.3
Carub.0002s0966 Capsella rubella HOM05D001319 ORTHO05D000922 5.3e-07 57.8 31 90.3
Carub.0026s0006 Capsella rubella HOM05D001319 ORTHO05D000922 5.3e-07 57.8 31 90.3
Thhalv10028342m.g Eutrema salsugineum HOM05D001319 ORTHO05D000922 5.3e-07 57.8 31 90.3
Sc14g0003770 Simmondsia chinensis HOM05D007167 ORTHO05D001070 6.9e-07 57.4 99 45.5
Sc14g0003870 Simmondsia chinensis HOM05D007167 ORTHO05D013628 6.9e-07 57.4 99 45.5
Sc14g0003940 Simmondsia chinensis HOM05D007167 ORTHO05D013628 6.9e-07 57.4 99 45.5
Sc14g0004250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 6.9e-07 57.4 99 45.5
Sc14g0004350 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.9e-07 57.4 99 45.5
ScUNg0000050 Simmondsia chinensis HOM05D007167 ORTHO05D000922 6.9e-07 57.4 99 45.5
ScUNg0000170 Simmondsia chinensis HOM05D007167 ORTHO05D000922 6.9e-07 57.4 99 45.5
ScUNg0000250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 6.9e-07 57.4 99 45.5
ScUNg0000310 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.9e-07 57.4 99 45.5
ScUNg0000440 Simmondsia chinensis HOM05D013320 ORTHO05D000922 6.9e-07 57.4 99 45.5
ScUNg0000510 Simmondsia chinensis HOM05D007167 ORTHO05D000922 6.9e-07 57.4 99 45.5
ScUNg0000660 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.9e-07 57.4 99 45.5
ScUNg0000690 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.9e-07 57.4 99 45.5
ScUNg0000730 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.9e-07 57.4 99 45.5
ScUNg0000780 Simmondsia chinensis HOM05D007167 ORTHO05D013628 6.9e-07 57.4 99 45.5
ScUNg0001240 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.9e-07 57.4 99 45.5
ScUNg0001280 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.9e-07 57.4 99 45.5
ScUNg0001330 Simmondsia chinensis HOM05D007167 ORTHO05D013628 6.9e-07 57.4 99 45.5
ScUNg0001370 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.9e-07 57.4 99 45.5
ScUNg0001420 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.9e-07 57.4 99 45.5
BcaC03g17344 Brassica carinata HOM05D000920 ORTHO05D000922 9.1e-07 57.0 47 68.1
ScUNg0000950 Simmondsia chinensis HOM05D007167 ORTHO05D000922 1.5e-06 56.2 42 69.0
Psat0s1917g0080 Pisum sativum HOM05D001828 ORTHO05D001745 2.0e-06 55.8 31 87.1
BNapus_Darmor_BZH_scaffold_107p00080 Brassica napus HOM05D007167 ORTHO05D000922 7.7e-06 53.9 29 89.7
CiPaw.15G100800 Carya illinoinensis HOM05D001319 ORTHO05D000922 7.7e-06 53.9 32 78.1


User provided reference genes

Program Settings