Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc0.168 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-48 196.1 97 100.0
Cpa.g.sc10.7 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-19 99.8 56 80.4
Cpa.g.sc56.27 Carica papaya HOM05D000002 ORTHO05D000047 3.7e-19 98.2 56 83.9
Cpa.g.sc867.1 Carica papaya HOM05D000002 ORTHO05D000047 8.2e-19 97.1 56 80.4
Cpa.g.sc7.9 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-18 96.7 61 75.4
Cpa.g.sc168.5 Carica papaya HOM05D000002 ORTHO05D000047 1.8e-18 95.9 56 78.6
Cpa.g.sc67.4 Carica papaya HOM05D000002 ORTHO05D000047 4.0e-18 94.7 61 72.1
Cpa.g.sc102.25 Carica papaya HOM05D007148 ORTHO05D009047 2.6e-17 92.0 55 76.4
Cpa.g.sc7.141 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-17 92.0 52 86.5
Cpa.g.sc44.5 Carica papaya HOM05D000002 ORTHO05D000047 7.6e-17 90.5 60 70.0
Cpa.g.sc67.66 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-16 90.1 56 75.0
Cpa.g.sc138.9 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-16 89.7 52 80.8
Cpa.g.sc63.36 Carica papaya HOM05D000002 ORTHO05D000047 4.9e-16 87.8 74 58.1
Cpa.g.sc20.50 Carica papaya HOM05D000002 ORTHO05D000047 8.4e-16 87.0 61 65.6
Cpa.g.sc5.32 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-15 86.7 62 66.1
Cpa.g.sc5.114 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-15 86.3 61 67.2
Hma1.2p1_0503F.1_g168050 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-15 86.3 61 67.2
Cpa.g.sc54.39 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-15 85.9 61 67.2
Cpa.g.sc34.28 Carica papaya HOM05D000002 ORTHO05D000047 2.5e-15 85.5 56 71.4
Cpa.g.sc159.30 Carica papaya HOM05D000002 ORTHO05D000047 3.2e-15 85.1 62 61.3
Cpa.g.sc96.44 Carica papaya HOM05D000002 ORTHO05D000047 4.2e-15 84.7 61 65.6
Cpa.g.sc25.135 Carica papaya HOM05D000002 ORTHO05D000047 5.5e-15 84.3 61 63.9
Cpa.g.sc130.28 Carica papaya HOM05D000002 ORTHO05D000047 9.3e-15 83.6 61 63.9
Cpa.g.sc28.123 Carica papaya HOM05D000207 ORTHO05D000047 9.3e-15 83.6 61 67.2
Cpa.g.sc29.59 Carica papaya HOM05D000002 ORTHO05D000047 9.3e-15 83.6 56 69.6
Cpa.g.sc58.26 Carica papaya HOM05D000002 ORTHO05D000047 9.3e-15 83.6 60 65.0
Cpa.g.sc24.62 Carica papaya HOM05D008870 ORTHO05D010906 1.6e-14 82.8 56 67.9
Cpa.g.sc39.115 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-14 82.8 56 66.1
Cpa.g.sc67.42 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-14 82.8 52 75.0
Cpa.g.sc86.67 Carica papaya HOM05D000002 ORTHO05D000047 2.1e-14 82.4 50 78.0
Cpa.g.sc30.24 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-14 82.0 61 57.4
Hma1.2p1_0036F.1_g023540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-14 82.0 68 63.2
Cpa.g.sc176.6 Carica papaya HOM05D000002 ORTHO05D000047 4.6e-14 81.3 61 59.0
Cpa.g.sc608.3 Carica papaya HOM05D000002 ORTHO05D000047 6.0e-14 80.9 61 60.7
Hma1.2p1_1349F.1_g277350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.0e-14 80.9 68 61.8
Cpa.g.sc161.16 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-13 80.1 62 59.7
Cpa.g.sc272.7 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-13 80.1 61 60.7
Cpa.g.sc301.4 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-13 79.7 61 60.7
Cpa.g.sc81.61 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-13 79.7 56 64.3
Cpa.g.sc126.7 Carica papaya HOM05D000002 ORTHO05D000047 3.0e-13 78.6 52 71.2
Cpa.g.sc21.143 Carica papaya HOM05D000002 ORTHO05D000047 3.0e-13 78.6 61 62.3
Cpa.g.sc118.36 Carica papaya HOM05D000002 ORTHO05D000047 5.1e-13 77.8 61 59.0
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.1e-13 77.8 61 59.0
Cpa.g.sc28.127 Carica papaya HOM05D000002 ORTHO05D000047 6.7e-13 77.4 55 65.5
Cpa.g.sc94.33 Carica papaya HOM05D000002 ORTHO05D000047 6.7e-13 77.4 48 72.9
Cpa.g.sc31.105 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-12 76.6 52 71.2
Gohir.D11G265450 Gossypium hirsutum HOM05D000002 ORTHO05D000047 1.5e-12 76.3 61 62.3
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-12 76.3 61 57.4
Cpa.g.sc153.13 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-12 75.9 61 55.7
Cpa.g.sc96.23 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-12 75.9 61 59.0
Cpa.g.sc68.34 Carica papaya HOM05D000002 ORTHO05D000047 3.3e-12 75.1 56 64.3
Cpa.g.sc25.53 Carica papaya HOM05D000002 ORTHO05D000047 4.3e-12 74.7 52 67.3
Hma1.2p1_0510F.1_g168800 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.3e-12 74.7 68 58.8
Cpa.g.sc1241.3 Carica papaya HOM05D000002 ORTHO05D000047 5.7e-12 74.3 52 69.2
Cpa.g.sc17.140 Carica papaya HOM05D002276 ORTHO05D002381 5.7e-12 74.3 54 61.1
Cpa.g.sc23.134 Carica papaya HOM05D000002 ORTHO05D000047 5.7e-12 74.3 49 69.4
Cpa.g.sc24.57 Carica papaya HOM05D000002 ORTHO05D000047 7.4e-12 73.9 55 63.6
Cpa.g.sc91.67 Carica papaya HOM05D000002 ORTHO05D000047 7.4e-12 73.9 55 61.8
Cpa.g.sc34.189 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-11 72.8 52 63.5
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.6e-11 72.8 65 52.3
Cpa.g.sc89.20 Carica papaya HOM05D000002 ORTHO05D000047 2.2e-11 72.4 54 63.0
Hma1.2p1_0018F.1_g013420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-11 72.0 61 54.1
Cpa.g.sc17.60 Carica papaya HOM05D000002 ORTHO05D000047 3.7e-11 71.6 50 62.0
Cpa.g.sc95.11 Carica papaya HOM05D002228 ORTHO05D002347 4.8e-11 71.2 56 60.7
Hma1.2p1_0217F.1_g091730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.3e-11 70.9 61 54.1
Hma1.2p1_0628F.1_g191990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.3e-11 70.9 61 54.1
Lj1g0019835 Lotus japonicus HOM05D000002 ORTHO05D000047 6.3e-11 70.9 88 43.2
Cpa.g.sc11.149 Carica papaya HOM05D000002 ORTHO05D000047 8.2e-11 70.5 51 62.7
Cpa.g.sc67.11 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-10 70.1 49 63.3
Cpa.g.sc73.41 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-10 70.1 54 66.7
Hma1.2p1_0450F.1_g155530 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-10 70.1 68 55.9
Hma1.2p1_0450F.1_g155545 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-10 70.1 68 55.9
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.8e-10 69.3 61 50.8
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-10 69.3 61 50.8
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-10 69.3 61 50.8
CSS0024170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.8e-10 69.3 61 50.8
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-10 69.3 61 50.8
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.8e-10 69.3 61 50.8
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-10 69.3 65 49.2
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-10 69.3 61 52.5
Cpa.g.sc614.1 Carica papaya HOM05D000002 ORTHO05D000047 2.4e-10 68.9 50 68.0
Hma1.2p1_0935F.1_g238580 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.4e-10 68.9 61 52.5
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-10 68.6 61 49.2
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-10 68.6 61 50.8
Cpa.g.sc97.54 Carica papaya HOM05D000002 ORTHO05D000047 3.1e-10 68.6 54 59.3
Ca_11532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 3.1e-10 68.6 56 57.1
SHI20907 Sapria himalayana HOM05D000002 ORTHO05D000047 3.1e-10 68.6 82 41.5
Eucgr.B01039 Eucalyptus grandis HOM05D000002 ORTHO05D000047 4.1e-10 68.2 56 58.9
Hma1.2p1_0062F.1_g034270 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.1e-10 68.2 61 52.5
Hma1.2p1_0359F.1_g135490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.1e-10 68.2 61 52.5
CSS0001169 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.3e-10 67.8 61 49.2
CSS0023724 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.3e-10 67.8 61 49.2
Hma1.2p1_1841F.1_g304990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.3e-10 67.8 56 57.1
CSS0003806 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-10 67.4 61 49.2
CSS0004509 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-10 67.4 61 49.2
CSS0005779 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-10 67.4 61 49.2
CSS0005870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-10 67.4 61 49.2
CSS0006173 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-10 67.4 61 49.2
CSS0008635 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-10 67.4 61 49.2
CSS0014620 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-10 67.4 61 49.2
CSS0015126 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-10 67.4 61 49.2
CSS0024888 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-10 67.4 61 49.2
CSS0033964 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-10 67.4 61 49.2
Hma1.2p1_0722F.1_g208760 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.9e-10 67.4 56 55.4
Cpa.g.sc37.118 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-09 66.6 56 55.4
GSVIVG01038208001 Vitis vinifera HOM05D000002 ORTHO05D000047 1.2e-09 66.6 61 50.8
CiPaw.11G071100 Carya illinoinensis HOM05D000002 ORTHO05D000047 1.5e-09 66.2 58 51.7
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-09 66.2 60 51.7
Hma1.2p1_1043F.1_g251210 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-09 65.9 61 49.2
Hma1.2p1_3882F.1_g337890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-09 65.9 61 47.5
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-09 65.5 61 49.2
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-09 65.5 61 49.2
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-09 65.5 61 49.2
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-09 65.5 61 49.2
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-09 65.5 61 49.2
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-09 65.5 61 49.2
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-09 65.5 61 49.2
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 2.6e-09 65.5 61 47.5
Cpa.g.sc20.131 Carica papaya HOM05D004423 ORTHO05D000047 3.4e-09 65.1 62 53.2
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 3.4e-09 65.1 94 40.4
Atru.chr11.465 Acer truncatum HOM05D000002 ORTHO05D000047 4.5e-09 64.7 59 52.5
Atru.chr3.2506 Acer truncatum HOM05D000002 ORTHO05D000047 4.5e-09 64.7 52 57.7
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.9e-09 64.3 60 48.3
Cpa.g.sc118.39 Carica papaya HOM05D000002 ORTHO05D000047 5.9e-09 64.3 36 83.3
Hma1.2p1_1513F.1_g288010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.9e-09 64.3 61 54.1
Nn1g04145 Nelumbo nucifera HOM05D000002 ORTHO05D000047 5.9e-09 64.3 56 55.4
Nn2g11309 Nelumbo nucifera HOM05D000002 ORTHO05D000047 7.6e-09 63.9 54 57.4
SHI23105 Sapria himalayana HOM05D000002 ORTHO05D000047 1.0e-08 63.5 53 54.7
CSS0034843 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.3e-08 63.2 61 42.6
CSS0045320 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.3e-08 63.2 61 42.6
Nn7g38028 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.3e-08 63.2 56 51.8
Cpa.g.sc10.272 Carica papaya HOM05D000002 ORTHO05D000047 2.2e-08 62.4 41 65.9
Cpa.g.sc11.108 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-08 62.0 50 64.0
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.9e-08 62.0 65 47.7
Hma1.2p1_0172F.1_g076310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.9e-08 62.0 56 48.2
Cpa.g.sc2.306 Carica papaya HOM05D000002 ORTHO05D000047 5.0e-08 61.2 55 52.7
Hma1.2p1_0172F.1_g076320 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.0e-08 61.2 52 55.8
Atru.chr9.342 Acer truncatum HOM05D000002 ORTHO05D000047 8.5e-08 60.5 61 44.3
Cpa.g.sc5.346 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-07 59.7 42 64.3
Hma1.2p1_0421F.1_g149900 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-07 59.7 47 59.6
SHI21689 Sapria himalayana HOM05D000002 ORTHO05D000047 3.2e-07 58.5 54 50.0
Cpa.g.sc301.6 Carica papaya HOM05D000002 ORTHO05D000047 7.2e-07 57.4 38 65.8
SHI01520 Sapria himalayana HOM05D002538 ORTHO05D003162 1.2e-06 56.6 43 55.8
SHI22436 Sapria himalayana HOM05D000002 ORTHO05D000047 1.2e-06 56.6 66 42.4
Cpa.g.sc2.36 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-06 56.2 79 40.5
Hma1.2p1_0093F.1_g046970 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.6e-06 56.2 48 60.4
SHI07600 Sapria himalayana HOM05D000002 ORTHO05D000047 2.7e-06 55.5 56 53.6
Cpa.g.sc232.2 Carica papaya HOM05D000002 ORTHO05D000047 3.6e-06 55.1 39 71.8
SHI15556 Sapria himalayana HOM05D000002 ORTHO05D000047 3.6e-06 55.1 57 47.4
SHI35708 Sapria himalayana HOM05D000002 ORTHO05D000047 6.1e-06 54.3 61 44.3
SHI29106 Sapria himalayana HOM05D000002 ORTHO05D000047 7.9e-06 53.9 59 47.5


User provided reference genes

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