Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc0.161 Carica papaya HOM05D004567 ORTHO05D005726 3.1e-218 761.5 386 100.0
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 5.0e-144 515.0 340 75.0
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 2.5e-143 512.7 339 76.1
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 4.8e-139 498.4 340 74.7
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 2.4e-138 496.1 339 74.6
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 2.4e-138 496.1 340 73.2
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 5.3e-138 495.0 340 74.1
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 7.0e-138 494.6 340 72.9
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 2.0e-137 493.0 343 72.3
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 3.5e-137 492.3 340 74.4
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 4.7e-134 481.9 326 74.2
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 1.0e-133 480.7 364 69.8
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 1.0e-133 480.7 356 69.4
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 1.0e-133 480.7 341 75.1
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 3.0e-133 479.2 334 72.5
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 4.0e-133 478.8 342 73.1
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 5.2e-133 478.4 340 73.5
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 4.4e-132 475.3 339 70.5
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 2.2e-131 473.0 338 70.4
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 2.2e-131 473.0 340 72.4
Duzib052G0538 Durio zibethinus HOM05D004567 ORTHO05D005726 1.1e-130 470.7 344 71.8
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 3.1e-130 469.2 337 70.9
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 4.1e-130 468.8 340 72.9
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 5.4e-130 468.4 339 72.6
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 1.2e-129 467.2 340 71.5
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 2.7e-129 466.1 340 72.1
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 7.7e-129 464.5 339 70.8
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 2.3e-128 463.0 339 70.8
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 2.3e-128 463.0 328 73.2
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 2.3e-128 463.0 362 68.0
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 6.5e-128 461.5 328 73.5
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 6.5e-128 461.5 339 70.2
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 8.6e-128 461.1 339 70.2
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 4.2e-127 458.8 339 69.6
Nitab4.5_0000167g0100 Nicotiana tabacum HOM05D004567 ORTHO05D005726 4.2e-127 458.8 353 67.7
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 3.6e-126 455.7 342 70.2
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 3.6e-126 455.7 340 69.4
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 3.0e-125 452.6 337 68.8
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 6.8e-125 451.4 337 68.8
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 1.5e-124 450.3 340 67.4
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 2.6e-124 449.5 337 68.5
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 5.7e-124 448.4 343 67.9
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 9.8e-124 447.6 328 70.7
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 1.7e-123 446.8 362 64.9
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 2.8e-123 446.0 340 67.9
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 3.7e-123 445.7 340 68.8
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 6.3e-123 444.9 339 68.4
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 8.3e-123 444.5 340 68.2
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 1.1e-122 444.1 338 66.9
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.4e-122 443.7 344 66.6
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 1.4e-122 443.7 339 67.6
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 5.4e-122 441.8 343 65.9
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 7.0e-122 441.4 344 68.0
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.7e-121 439.5 344 66.3
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 2.7e-121 439.5 341 68.0
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 4.5e-121 438.7 344 66.0
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 4.5e-121 438.7 344 66.0
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 7.8e-121 438.0 328 69.2
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.3e-120 437.2 344 66.0
Rhsim06G0125800 Rhododendron simsii HOM05D004567 ORTHO05D005726 4.3e-119 432.2 377 62.6
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 5.6e-119 431.8 340 67.4
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 1.8e-117 426.8 341 66.6
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 5.2e-117 425.2 363 63.4
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 6.8e-117 424.9 340 66.8
CAN.G2.11 Capsicum annuum HOM05D004567 ORTHO05D005726 2.6e-116 422.9 363 61.2
Hund24369 Selenicereus undatus HOM05D004567 ORTHO05D005726 3.4e-116 422.5 339 65.2
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 1.3e-115 420.6 340 66.8
Oeu029993.1 Olea europaea HOM05D004567 ORTHO05D005726 1.7e-115 420.2 353 64.3
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 2.9e-115 419.5 340 66.8
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 2.9e-115 419.5 358 64.8
ECA246G0539 Erigeron canadensis HOM05D004567 ORTHO05D005726 8.3e-115 417.9 364 62.1
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 2.4e-114 416.4 345 64.9
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 3.2e-114 416.0 302 74.5
PGSC0003DMG401027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 5.4e-114 415.2 325 67.7
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 1.7e-112 410.2 342 65.8
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 6.6e-112 408.3 340 64.7
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 6.6e-112 408.3 343 65.9
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 7.3e-111 404.8 336 62.8
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 7.3e-111 404.8 291 72.5
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 9.5e-111 404.4 342 65.2
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 2.8e-110 402.9 339 65.8
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 8.0e-110 401.4 342 62.9
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 8.0e-110 401.4 356 61.5
Nitab4.5_0004158g0010 Nicotiana tabacum HOM05D004567 ORTHO05D005726 1.4e-109 400.6 325 66.2
HanXRQChr12g0379741 Helianthus annuus HOM05D004567 ORTHO05D005726 1.8e-109 400.2 370 60.5
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 5.2e-109 398.7 340 65.3
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 8.9e-109 397.9 339 62.8
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 1.3e-107 394.0 341 61.6
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 4.9e-107 392.1 341 63.6
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 8.3e-107 391.3 358 59.2
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 1.9e-106 390.2 340 63.2
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 9.2e-106 387.9 341 62.8
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 1.6e-105 387.1 343 60.9
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 1.6e-105 387.1 340 64.1
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 7.8e-105 384.8 360 61.7
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.3e-104 384.0 339 61.4
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 3.0e-104 382.9 341 62.2
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 3.9e-104 382.5 360 61.7
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 1.1e-103 380.9 349 59.0
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 1.2e-102 377.5 360 60.8
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 2.1e-102 376.7 360 61.1
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 8.1e-102 374.8 344 58.7
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 8.9e-101 371.3 344 58.4
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 2.6e-100 369.8 341 59.8
A06p03590 Brassica napus HOM05D004567 ORTHO05D005726 7.5e-100 368.2 334 62.9
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 2.9e-99 366.3 369 59.1
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 1.0e-96 357.8 315 63.2
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 1.5e-95 354.0 316 63.3
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 2.2e-91 340.1 319 59.2
Os06g0618600 Oryza sativa ssp. japonica HOM05D004567 ORTHO05D005726 4.9e-91 339.0 330 57.0
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 8.4e-91 338.2 338 55.6
unitig_578.g16282 Utricularia gibba HOM05D004567 ORTHO05D005726 8.1e-78 295.0 331 52.6
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 5.4e-74 282.3 269 58.4
SEGI_15833 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 1.2e-73 281.2 352 47.7
ClCG10G008360 Citrullus lanatus HOM05D004567 ORTHO05D005726 1.0e-64 251.5 234 62.0
MELO3C018973.2 Cucumis melo HOM05D004567 ORTHO05D005726 2.5e-58 230.3 183 67.2
BraA06t23566Z Brassica rapa HOM05D004567 ORTHO05D005726 9.3e-58 228.4 145 78.6
Cfa022169 Carpinus fangiana HOM05D004567 ORTHO05D005726 1.3e-56 224.6 132 81.1
Duzib248G1520 Durio zibethinus HOM05D004567 ORTHO05D005726 1.3e-56 224.6 134 79.1
Mapoly0026s0045 Marchantia polymorpha HOM05D004567 ORTHO05D005726 5.1e-56 222.6 348 40.5
Pp3c23_19720 Physcomitrium patens HOM05D004567 ORTHO05D005726 1.4e-53 214.5 362 37.8
SMO367G1304 Selaginella moellendorffii HOM05D004567 ORTHO05D005726 1.2e-52 211.5 347 39.8
Oeu029992.1 Olea europaea HOM05D004567 ORTHO05D005726 2.6e-52 210.3 151 68.9
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis HOM05D004567 ORTHO05D005726 3.4e-52 209.9 342 40.1
C06p05100 Brassica napus HOM05D004567 ORTHO05D005726 4.5e-52 209.5 165 67.3
Pp3c20_6950 Physcomitrium patens HOM05D004567 ORTHO05D005726 2.5e-50 203.8 330 40.0
unitig_44.g31559 Utricularia gibba HOM05D004567 ORTHO05D005726 5.1e-48 196.1 140 68.6
ClCG10G008380 Citrullus lanatus HOM05D004567 ORTHO05D005726 2.6e-44 183.7 104 77.9
Zm00001eb066810 Zea mays HOM05D004567 ORTHO05D005726 3.9e-32 143.3 199 45.7
CBR_g8998 Chara braunii HOM05D004567 ORTHO05D005726 3.7e-30 136.7 123 50.4
Rhsim06G0125500 Rhododendron simsii HOM05D004567 ORTHO05D005726 6.3e-30 136.0 158 53.8
Rhsim06G0125600 Rhododendron simsii HOM05D004567 ORTHO05D005726 3.8e-19 100.1 83 61.4
Rhsim06G0125400 Rhododendron simsii HOM05D004567 ORTHO05D005726 2.1e-17 94.4 53 77.4
TAR623G0420 Trochodendron aralioides HOM05D004567 ORTHO05D037809 4.8e-14 83.2 160 39.4


User provided reference genes

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