Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc0.139 Carica papaya HOM05D006433 ORTHO05D005382 1.0e-151 540.0 277 100.0
Thecc.02G159800 Theobroma cacao HOM05D006433 ORTHO05D005382 6.1e-35 152.1 293 39.2
Actinidia13713 Actinidia chinensis HOM05D006433 ORTHO05D005382 2.6e-33 146.7 281 39.5
Actinidia38416 Actinidia chinensis HOM05D006433 ORTHO05D005382 5.7e-33 145.6 276 39.5
Haze_11768 Corylus avellana HOM05D006433 ORTHO05D005382 3.7e-32 142.9 320 35.3
Cfa008752 Carpinus fangiana HOM05D006433 ORTHO05D005382 5.3e-31 139.0 319 37.3
Potri.005G092400 Populus trichocarpa HOM05D006433 ORTHO05D005382 9.1e-31 138.3 308 37.7
CiPaw.05G169900 Carya illinoinensis HOM05D006433 ORTHO05D005382 2.7e-30 136.7 311 33.8
Manes.11G107400 Manihot esculenta HOM05D006433 ORTHO05D005382 7.7e-30 135.2 294 34.7
Potri.007G071900 Populus trichocarpa HOM05D006433 ORTHO05D005382 7.7e-30 135.2 301 37.2
TAR629G0072 Trochodendron aralioides HOM05D006433 ORTHO05D005382 1.0e-29 134.8 289 32.9
Sabra05G0076500 Salix brachista HOM05D006433 ORTHO05D005382 3.6e-27 126.3 300 36.7
Manes.03G007400 Manihot esculenta HOM05D006433 ORTHO05D005382 6.1e-27 125.6 289 37.7
TWI74G1071 Tripterygium wilfordii HOM05D006433 ORTHO05D005382 2.3e-26 123.6 281 36.3
Gohir.A03G164900 Gossypium hirsutum HOM05D006433 ORTHO05D005382 8.8e-26 121.7 298 39.3
Gorai.005G210800 Gossypium raimondii HOM05D006433 ORTHO05D005382 1.2e-25 121.3 300 36.3
Duzib132G0593 Durio zibethinus HOM05D006433 ORTHO05D005382 1.5e-25 120.9 293 35.5
Gohir.D02G188100 Gossypium hirsutum HOM05D006433 ORTHO05D005382 2.0e-25 120.6 293 36.9
TWI77G0994 Tripterygium wilfordii HOM05D006433 ORTHO05D005382 4.4e-25 119.4 282 37.9
Ciclev10031878m.g Citrus clementina HOM05D006433 ORTHO05D005382 7.5e-25 118.6 350 34.3
TAR371G0604 Trochodendron aralioides HOM05D006433 ORTHO05D005382 1.3e-24 117.9 305 30.8
COL.COLO4_03341 Corchorus olitorius HOM05D006433 ORTHO05D005382 1.7e-24 117.5 304 37.2
Sabra07G0060600 Salix brachista HOM05D006433 ORTHO05D005382 1.4e-23 114.4 297 33.3
PGR142G2540 Punica granatum HOM05D006433 ORTHO05D005382 4.1e-23 112.8 306 32.7
Duzib248G0841 Durio zibethinus HOM05D006433 ORTHO05D005382 5.4e-23 112.5 289 33.9
AT5G08240 Arabidopsis thaliana HOM05D006433 ORTHO05D005382 2.0e-22 110.5 295 31.9
A10p28440 Brassica napus HOM05D006433 ORTHO05D005382 2.7e-22 110.2 288 31.9
BraA10t44892Z Brassica rapa HOM05D006433 ORTHO05D005382 2.7e-22 110.2 288 31.9
Thhalv10014452m.g Eutrema salsugineum HOM05D006433 ORTHO05D005382 1.7e-21 107.5 292 31.2
CARHR204930 Cardamine hirsuta HOM05D006433 ORTHO05D005382 3.8e-21 106.3 292 30.5
RcHm_v2.0_Chr4g0446731 Rosa chinensis HOM05D006433 ORTHO05D005382 1.1e-20 104.8 323 32.8
Nitab4.5_0002132g0010 Nicotiana tabacum HOM05D006433 ORTHO05D005382 1.5e-20 104.4 305 30.2
PGSC0003DMG400032563 Solanum tuberosum HOM05D006433 ORTHO05D005382 1.9e-20 104.0 300 32.7
Sp6g34710 Schrenkiella parvula HOM05D006433 ORTHO05D005382 2.5e-20 103.6 292 29.1
MBI06_g16016_MAGBIO Magnolia biondii HOM05D006433 ORTHO05D005382 3.2e-20 103.2 297 31.3
Nitab4.5_0005356g0050 Nicotiana tabacum HOM05D006433 ORTHO05D005382 3.6e-19 99.8 310 30.0
AL6G18640 Arabidopsis lyrata HOM05D006433 ORTHO05D005382 4.7e-19 99.4 286 31.5
Lj6A717T151 Lonicera japonica HOM05D006433 ORTHO05D005382 4.7e-19 99.4 252 31.7
Carub.0006s0712 Capsella rubella HOM05D006433 ORTHO05D005382 8.0e-19 98.6 292 28.8
AT5G23160 Arabidopsis thaliana HOM05D006433 ORTHO05D005382 1.8e-18 97.4 291 29.6
MBI03_g09362_MAGBIO Magnolia biondii HOM05D006433 ORTHO05D005382 2.3e-18 97.1 286 29.0
TPR.G39976 Trifolium pratense HOM05D006433 ORTHO05D005382 2.3e-18 97.1 280 29.3
Cc11_g02400 Coffea canephora HOM05D006433 ORTHO05D005382 8.8e-18 95.1 305 31.1
Glyma.09G282600 Glycine max HOM05D006433 ORTHO05D005382 2.0e-17 94.0 293 29.4
QL03p044176 Quercus lobata HOM05D006433 ORTHO05D005382 2.6e-17 93.6 294 32.0
Solyc04g009305.1 Solanum lycopersicum HOM05D006433 ORTHO05D005382 2.6e-17 93.6 296 31.8
BcaC03g18036 Brassica carinata HOM05D006433 ORTHO05D005382 1.7e-16 90.9 276 28.3
CiPaw.06G061400 Carya illinoinensis HOM05D006433 ORTHO05D005382 1.7e-16 90.9 315 30.5
AL6G34350 Arabidopsis lyrata HOM05D006433 ORTHO05D005382 2.2e-16 90.5 294 27.9
Gohir.D12G137000 Gossypium hirsutum HOM05D006433 ORTHO05D005382 2.8e-16 90.1 279 31.5
BcaNung05094 Brassica carinata HOM05D006433 ORTHO05D005382 3.7e-16 89.7 289 28.7
C09p68700 Brassica napus HOM05D006433 ORTHO05D005382 3.7e-16 89.7 285 28.1
BolC9t59616H Brassica oleracea HOM05D006433 ORTHO05D005382 3.7e-16 89.7 285 28.1
BraA02t09057Z Brassica rapa HOM05D006433 ORTHO05D005382 4.9e-16 89.4 292 28.4
Medtr1g037520 Medicago truncatula HOM05D006433 ORTHO05D005382 4.9e-16 89.4 286 29.7
FvH4_4g36960 Fragaria vesca HOM05D006433 ORTHO05D005382 6.3e-16 89.0 341 28.7
FAN12G0758 Fragaria x ananassa HOM05D006433 ORTHO05D005382 6.3e-16 89.0 341 28.7
Gorai.008G148300 Gossypium raimondii HOM05D006433 ORTHO05D005382 8.3e-16 88.6 284 32.4
DCAR_002584 Daucus carota HOM05D006433 ORTHO05D005382 1.1e-15 88.2 261 33.7
Gohir.A12G133500 Gossypium hirsutum HOM05D006433 ORTHO05D005382 1.1e-15 88.2 276 31.2
Lj2g0006429 Lotus japonicus HOM05D006433 ORTHO05D005382 1.8e-15 87.4 277 30.3
C03p04180 Brassica napus HOM05D006433 ORTHO05D005382 2.4e-15 87.0 270 29.6
Eucgr.G02576 Eucalyptus grandis HOM05D006433 ORTHO05D005382 2.4e-15 87.0 163 38.0
Nitab4.5_0000771g0160 Nicotiana tabacum HOM05D006433 ORTHO05D005382 2.4e-15 87.0 308 28.2
BcaB07g29865 Brassica carinata HOM05D006433 ORTHO05D005382 3.1e-15 86.7 98 46.9
C02p61000 Brassica napus HOM05D006433 ORTHO05D005382 9.2e-15 85.1 276 27.5
DCAR_026896 Daucus carota HOM05D006433 ORTHO05D005382 9.2e-15 85.1 250 30.8
FAN07G1145 Fragaria x ananassa HOM05D006433 ORTHO05D005382 9.2e-15 85.1 326 30.7
Aa31LG3G18330 Aethionema arabicum HOM05D006433 ORTHO05D005382 1.2e-14 84.7 296 29.4
A03p03690 Brassica napus HOM05D006433 ORTHO05D005382 1.2e-14 84.7 270 28.5
BolC2t12149H Brassica oleracea HOM05D006433 ORTHO05D005382 1.2e-14 84.7 281 28.1
BraA03t09717Z Brassica rapa HOM05D006433 ORTHO05D005382 1.2e-14 84.7 270 28.5
Thhalv10005318m.g Eutrema salsugineum HOM05D006433 ORTHO05D005382 1.2e-14 84.7 109 45.0
A02p41140 Brassica napus HOM05D006433 ORTHO05D005382 2.7e-14 83.6 154 35.1
FAN17G1725 Fragaria x ananassa HOM05D006433 ORTHO05D005382 2.7e-14 83.6 340 28.2
Psat6g135800 Pisum sativum HOM05D006433 ORTHO05D005382 2.7e-14 83.6 280 30.0
Lalb_Chr10g0094961 Lupinus albus HOM05D006433 ORTHO05D005382 4.5e-14 82.8 290 30.7
ECA246G5167 Erigeron canadensis HOM05D006433 ORTHO05D005382 5.9e-14 82.4 115 41.7
BcaB08g37272 Brassica carinata HOM05D006433 ORTHO05D005382 1.0e-13 81.6 286 29.7
BcaB01g05621 Brassica carinata HOM05D006433 ORTHO05D005382 1.7e-13 80.9 269 30.5
BolC3t12950H Brassica oleracea HOM05D006433 ORTHO05D005382 1.7e-13 80.9 269 30.5
AUR62032989 Chenopodium quinoa HOM05D006433 ORTHO05D005382 1.7e-13 80.9 275 27.3
VMungo0251G3481 Vigna mungo HOM05D006433 ORTHO05D005382 3.8e-13 79.7 281 29.2
AUR62017700 Chenopodium quinoa HOM05D006433 ORTHO05D005382 6.6e-13 79.0 282 28.4
Lsat_1_v5_gn_3_35360 Lactuca sativa HOM05D006433 ORTHO05D005382 6.6e-13 79.0 298 27.9
Sopen04g004420 Solanum pennellii HOM05D006433 ORTHO05D005382 6.6e-13 79.0 121 39.7
Aa31LG11G2650 Aethionema arabicum HOM05D006433 ORTHO05D005382 1.1e-12 78.2 275 29.1
arahy.Tifrunner.gnm1.ann1.48DCIV Arachis hypogaea HOM05D056638 ORTHO05D005382 1.1e-12 78.2 282 29.8
CANSAT56G2818 Cannabis sativa HOM05D006433 ORTHO05D005382 1.5e-12 77.8 301 28.9
MD13G1005200 Malus domestica HOM05D006433 ORTHO05D005382 2.5e-12 77.0 96 42.7
CARHR190370 Cardamine hirsuta HOM05D006433 ORTHO05D005382 5.6e-12 75.9 111 40.5
Carub.0006s2095 Capsella rubella HOM05D006433 ORTHO05D005382 7.3e-12 75.5 101 41.6
MD16G1002700 Malus domestica HOM05D006433 ORTHO05D005382 1.2e-11 74.7 101 41.6
Prupe.1G347600 Prunus persica HOM05D006433 ORTHO05D005382 1.2e-11 74.7 83 48.2
arahy.Tifrunner.gnm1.ann1.0GGX7L Arachis hypogaea HOM05D006433 ORTHO05D005382 6.1e-11 72.4 254 26.0
arahy.Tifrunner.gnm1.ann1.X1AWTF Arachis hypogaea HOM05D006433 ORTHO05D005382 6.1e-11 72.4 102 42.2
ATR0618G439 Amborella trichopoda HOM05D006433 ORTHO05D005382 8.0e-11 72.0 294 26.9
Glyma.20G002800 Glycine max HOM05D006433 ORTHO05D005382 1.0e-10 71.6 85 47.1
MELO3C023593.2 Cucumis melo HOM05D027220 ORTHO05D005382 1.8e-10 70.9 300 26.7
SGA_v2.0_scaffold6G03215 Striga asiatica HOM05D006433 ORTHO05D005382 1.8e-10 70.9 277 27.1
Phvul.003G005000 Phaseolus vulgaris HOM05D006433 ORTHO05D005382 2.3e-10 70.5 286 25.9
ClCG09G004510 Citrullus lanatus HOM05D027220 ORTHO05D005382 5.2e-10 69.3 313 29.7
Oeu063832.1 Olea europaea HOM05D006433 ORTHO05D005382 2.0e-09 67.4 135 36.3
Sabra16G0271700 Salix brachista HOM05D006433 ORTHO05D005382 5.7e-09 65.9 94 36.2
Sabra16G0276700 Salix brachista HOM05D006433 ORTHO05D005382 5.7e-09 65.9 94 36.2
Glyma.11G100200 Glycine max HOM05D025712 ORTHO05D029749 2.9e-08 63.5 231 27.7
Oeu013185.1 Olea europaea HOM05D006433 ORTHO05D005382 4.9e-08 62.8 93 40.9
PSO063G0432 Papaver somniferum HOM05D061112 ORTHO05D005382 4.9e-08 62.8 282 24.8
Sc06g0007710 Simmondsia chinensis HOM05D006433 ORTHO05D005382 8.3e-08 62.0 293 27.0
TAR011G0003 Trochodendron aralioides HOM05D008701 ORTHO05D010238 8.3e-08 62.0 109 36.7
Nn1g03826 Nelumbo nucifera HOM05D008701 ORTHO05D005382 1.4e-07 61.2 81 43.2
Potri.001G408900 Populus trichocarpa HOM05D006433 ORTHO05D005382 1.4e-07 61.2 96 35.4
MSTRG.13683 Avicennia marina HOM05D006433 ORTHO05D005382 3.2e-07 60.1 264 25.4
Haze_13046 Corylus avellana HOM05D008701 ORTHO05D010238 4.1e-07 59.7 159 35.2
DCAR_025546 Daucus carota HOM05D006433 ORTHO05D005382 4.1e-07 59.7 195 25.6
TWI38G1693 Tripterygium wilfordii HOM05D013385 ORTHO05D005382 5.4e-07 59.3 80 40.0
Cfa014502 Carpinus fangiana HOM05D008701 ORTHO05D010238 9.2e-07 58.5 158 32.9
SalBow2G0414 Salvia bowleyana HOM05D006433 ORTHO05D005382 2.0e-06 57.4 119 32.8
Migut.E00694 Erythranthe guttata HOM05D006433 ORTHO05D005382 2.7e-06 57.0 169 28.4
TAR624G0030 Trochodendron aralioides HOM05D008701 ORTHO05D010238 4.6e-06 56.2 115 31.3
TAR624G0398 Trochodendron aralioides HOM05D008701 ORTHO05D010238 4.6e-06 56.2 115 31.3
Dinv08359 Davidia involucrata HOM05D012187 ORTHO05D005382 5.9e-06 55.8 79 35.4
PSO782G4784 Papaver somniferum HOM05D061112 ORTHO05D005382 5.9e-06 55.8 289 23.2
Sed0004092 Sechium edule HOM05D027220 ORTHO05D005382 5.9e-06 55.8 290 25.2
TWI39G0991 Tripterygium wilfordii HOM05D013385 ORTHO05D005382 5.9e-06 55.8 169 28.4
TAR626G1447 Trochodendron aralioides HOM05D008701 ORTHO05D010238 5.9e-06 55.8 79 38.0
DCAR_023460 Daucus carota HOM05D006433 ORTHO05D005382 7.8e-06 55.5 254 27.2


User provided reference genes

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