Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 7.5e-92 340.5 172 100.0
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 1.5e-23 113.6 66 83.3
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 5.7e-23 111.7 61 90.2
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 7.4e-23 111.3 180 43.9
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 9.7e-23 110.9 66 83.3
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 1.7e-22 110.2 66 81.8
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 1.7e-22 110.2 66 81.8
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 2.2e-22 109.8 173 45.1
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.2e-22 109.8 66 81.8
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 2.8e-22 109.4 60 88.3
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 2.8e-22 109.4 66 81.8
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 3.7e-22 109.0 66 81.8
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 4.8e-22 108.6 60 86.7
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 4.8e-22 108.6 60 86.7
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 6.3e-22 108.2 66 81.8
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 6.3e-22 108.2 59 89.8
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 8.2e-22 107.8 66 81.8
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 1.1e-21 107.5 66 81.8
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 1.8e-21 106.7 59 88.1
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 2.4e-21 106.3 60 85.0
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 2.4e-21 106.3 66 81.8
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 4.1e-21 105.5 66 81.8
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 4.1e-21 105.5 59 86.4
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 4.1e-21 105.5 66 78.8
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 5.3e-21 105.1 66 80.3
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 5.3e-21 105.1 66 80.3
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 5.3e-21 105.1 66 80.3
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 6.9e-21 104.8 66 75.8
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 9.1e-21 104.4 60 83.3
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 9.1e-21 104.4 68 77.9
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 9.1e-21 104.4 66 80.3
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 1.2e-20 104.0 66 78.8
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 1.5e-20 103.6 66 78.8
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 1.5e-20 103.6 66 80.3
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 2.0e-20 103.2 65 80.0
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 4.5e-20 102.1 60 85.0
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 4.5e-20 102.1 62 80.6
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 5.9e-20 101.7 64 76.6
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 5.9e-20 101.7 65 76.9
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 1.3e-19 100.5 66 75.8
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 1.7e-19 100.1 62 82.3
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 2.9e-19 99.4 62 77.4
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 2.9e-19 99.4 66 75.8
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 3.8e-19 99.0 66 77.3
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 5.0e-19 98.6 62 79.0
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 5.0e-19 98.6 66 77.3
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 6.5e-19 98.2 62 82.3
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 6.5e-19 98.2 116 52.6
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 6.5e-19 98.2 60 85.0
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 8.5e-19 97.8 66 77.3
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 8.5e-19 97.8 63 81.0
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 8.5e-19 97.8 63 81.0
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 8.5e-19 97.8 66 74.2
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 1.4e-18 97.1 63 81.0
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 1.4e-18 97.1 173 41.0
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 1.4e-18 97.1 66 75.8
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 1.4e-18 97.1 170 42.9
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 1.4e-18 97.1 73 75.3
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 1.9e-18 96.7 58 81.0
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 2.5e-18 96.3 60 78.3
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 3.2e-18 95.9 64 73.4
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 3.2e-18 95.9 64 73.4
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 3.2e-18 95.9 85 63.5
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 3.2e-18 95.9 62 77.4
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 1.6e-17 93.6 66 75.8
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 6.1e-17 91.7 58 77.6
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 6.1e-17 91.7 68 73.5
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 7.9e-17 91.3 60 73.3
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 7.9e-17 91.3 62 74.2
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 7.9e-17 91.3 62 71.0
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 7.9e-17 91.3 62 72.6
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 7.9e-17 91.3 66 71.2
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 1.8e-16 90.1 68 70.6
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 2.3e-16 89.7 66 69.7
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 3.0e-16 89.4 66 72.7
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 3.0e-16 89.4 66 69.7
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 3.9e-16 89.0 66 72.7
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 5.1e-16 88.6 62 74.2
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 5.1e-16 88.6 62 72.6
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 1.1e-15 87.4 54 79.6
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 1.1e-15 87.4 60 75.0
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 2.0e-15 86.7 49 85.7
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 2.6e-15 86.3 62 69.4
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 2.6e-15 86.3 60 71.7
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 4.4e-15 85.5 49 85.7
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 5.7e-15 85.1 49 85.7
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 9.7e-15 84.3 52 76.9
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 9.7e-15 84.3 60 73.3
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 4.8e-14 82.0 57 71.9
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 2.4e-13 79.7 65 60.0
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 3.1e-13 79.3 67 65.7
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 3.1e-13 79.3 67 67.2
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.2e-12 77.4 56 69.6
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 2.0e-12 76.6 49 81.6
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.3e-11 73.9 57 66.7
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 2.2e-11 73.2 49 73.5
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 2.9e-11 72.8 102 45.1
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 8.5e-11 71.2 54 63.0
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 1.9e-10 70.1 54 63.0
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.9e-10 70.1 53 64.2
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 5.5e-10 68.6 38 86.8
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 5.5e-10 68.6 59 59.3
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 1.6e-09 67.0 56 58.9
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 4.7e-09 65.5 45 71.1
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 1.8e-08 63.5 35 88.6
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 1.8e-08 63.5 65 56.9
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 7.4e-07 58.2 40 65.0
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 1.7e-06 57.0 62 56.5
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 2.8e-06 56.2 59 54.2


User provided reference genes

Program Settings