Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc0.119 Carica papaya HOM05D000004 ORTHO05D000563 7.1e-59 230.3 112 100.0
Cpa.g.sc943.3 Carica papaya HOM05D000004 ORTHO05D000563 5.1e-33 144.4 111 65.8
Cpa.g.sc101.17 Carica papaya HOM05D000004 ORTHO05D000563 3.9e-25 118.2 91 63.7
Cpa.g.sc60.41 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-24 116.3 91 64.8
Cpa.g.sc949.2 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-23 112.8 91 63.7
Cpa.g.sc0.175 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-17 92.8 91 60.4
Cpa.g.sc60.44 Carica papaya HOM05D000004 ORTHO05D000563 5.7e-16 87.8 84 54.8
Cpa.g.sc41.46 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-15 86.7 91 52.7
Cpa.g.sc4.184 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-11 73.6 47 72.3
QL11p008013 Quercus lobata HOM05D000004 ORTHO05D000563 4.7e-10 68.2 101 36.6
Cpa.g.sc305.4 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-08 63.5 58 46.6
Cpa.g.sc54.19 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-08 62.8 110 35.5
Cpa.g.sc143.15 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-08 62.4 58 46.6
Cpa.g.sc44.39 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-08 62.4 92 39.1
QL07p027315 Quercus lobata HOM05D000004 ORTHO05D000002 3.4e-08 62.0 107 35.5
Sed0009597 Sechium edule HOM05D010826 ORTHO05D013073 3.4e-08 62.0 73 46.6
Cpa.g.sc22.77 Carica papaya HOM05D000004 ORTHO05D000563 5.7e-08 61.2 110 34.5
Cpa.g.sc2811.1 Carica papaya HOM05D000004 ORTHO05D000563 5.7e-08 61.2 115 38.3
Cpa.g.sc32.157 Carica papaya HOM05D000004 ORTHO05D000563 5.7e-08 61.2 35 74.3
Cpa.g.sc38.20 Carica papaya HOM05D000004 ORTHO05D000563 5.7e-08 61.2 110 36.4
Cpa.g.sc40.40 Carica papaya HOM05D000004 ORTHO05D000563 5.7e-08 61.2 85 38.8
Cpa.g.sc10.121 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-08 60.8 105 37.1
Cpa.g.sc1555.3 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-08 60.8 58 44.8
Atru.chr9.178 Acer truncatum HOM05D000004 ORTHO05D000563 9.8e-08 60.5 50 46.0
Cpa.g.sc4.191 Carica papaya HOM05D000004 ORTHO05D000563 9.8e-08 60.5 79 39.2
Cpa.g.sc219.5 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-07 60.1 104 35.6
SHI49845 Sapria himalayana HOM05D000004 ORTHO05D000563 1.3e-07 60.1 56 46.4
THA.LOC104799780 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.3e-07 60.1 90 33.3
THA.LOC104806048 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.3e-07 60.1 90 33.3
Cpa.g.sc15.96 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-07 59.7 105 34.3
Cpa.g.sc15.98 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-07 59.7 105 34.3
Cpa.g.sc28.156 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-07 59.7 110 37.3
THA.LOC109116955 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.7e-07 59.7 58 39.7
Cpa.g.sc225.4 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-07 59.3 58 44.8
Cpa.g.sc303.4 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-07 59.3 95 36.8
Cpa.g.sc38.15 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-07 59.3 110 37.3
QL10p037628 Quercus lobata HOM05D000004 ORTHO05D000002 2.2e-07 59.3 58 43.1
THA.LOC109117128 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.2e-07 59.3 58 39.7
Atru.chr8.565 Acer truncatum HOM05D000004 ORTHO05D000563 2.8e-07 58.9 52 44.2
PGR031G2848 Punica granatum HOM05D000004 ORTHO05D000002 3.7e-07 58.5 63 38.1
PGR083G2791 Punica granatum HOM05D000004 ORTHO05D000563 3.7e-07 58.5 56 41.1
SHI46426 Sapria himalayana HOM05D000004 ORTHO05D000563 3.7e-07 58.5 93 37.6
THA.LOC104821896 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 3.7e-07 58.5 90 32.2
Atru.chr6.660 Acer truncatum HOM05D000003 ORTHO05D000004 4.8e-07 58.2 50 48.0
CANSAT25G3060 Cannabis sativa HOM05D000004 ORTHO05D000563 4.8e-07 58.2 67 40.3
Cpa.g.sc303.2 Carica papaya HOM05D000004 ORTHO05D000563 4.8e-07 58.2 102 38.2
Cpa.g.sc39.88 Carica papaya HOM05D000004 ORTHO05D000563 4.8e-07 58.2 64 46.9
Cpa.g.sc154.1 Carica papaya HOM05D000004 ORTHO05D000563 6.3e-07 57.8 89 39.3
Cpa.g.sc239.3 Carica papaya HOM05D000004 ORTHO05D000563 6.3e-07 57.8 74 39.2
Cpa.g.sc40.67 Carica papaya HOM05D000004 ORTHO05D000563 6.3e-07 57.8 78 37.2
SHI51545 Sapria himalayana HOM05D000004 ORTHO05D000563 6.3e-07 57.8 107 31.8
Cpa.g.sc11.128 Carica papaya HOM05D000004 ORTHO05D000563 8.3e-07 57.4 41 68.3
Cpa.g.sc1555.2 Carica papaya HOM05D000004 ORTHO05D000563 8.3e-07 57.4 103 36.9
Cpa.g.sc56.12 Carica papaya HOM05D000004 ORTHO05D000563 8.3e-07 57.4 62 40.3
Cpa.g.sc75.77 Carica papaya HOM05D000004 ORTHO05D000563 8.3e-07 57.4 58 43.1
THA.LOC109116513 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 8.3e-07 57.4 58 37.9
Cpa.g.sc172.6 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-06 57.0 56 44.6
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-06 57.0 46 50.0
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-06 57.0 46 50.0
Cpa.g.sc38.75 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-06 56.6 58 44.8
Cpa.g.sc6.80 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-06 56.6 94 37.2
SHI32913 Sapria himalayana HOM05D000004 ORTHO05D000563 1.4e-06 56.6 56 44.6
Atru.chr8.715 Acer truncatum HOM05D000004 ORTHO05D000563 1.8e-06 56.2 52 44.2
Cpa.g.sc15.34 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-06 56.2 50 48.0
Cpa.g.sc41.28 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-06 56.2 72 37.5
Cpa.g.sc658.1 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-06 56.2 93 38.7
Cpa.g.sc35.67 Carica papaya HOM05D000004 ORTHO05D000563 2.4e-06 55.8 56 42.9
THA.LOC109116027 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.4e-06 55.8 80 35.0
Cpa.g.sc28.100 Carica papaya HOM05D000004 ORTHO05D000563 3.1e-06 55.5 110 32.7
Cpa.g.sc3290.1 Carica papaya HOM05D000004 ORTHO05D000563 3.1e-06 55.5 110 34.5
Cpa.g.sc92.118 Carica papaya HOM05D000004 ORTHO05D000563 3.1e-06 55.5 95 35.8
Cpa.g.sc97.21 Carica papaya HOM05D000004 ORTHO05D000563 3.1e-06 55.5 81 34.6
PGR025G0001 Punica granatum HOM05D000004 ORTHO05D000002 3.1e-06 55.5 56 37.5
PGR044G2607 Punica granatum HOM05D000004 ORTHO05D000002 3.1e-06 55.5 56 37.5
PGR052G0001 Punica granatum HOM05D000004 ORTHO05D000002 3.1e-06 55.5 56 37.5
PGR083G1623 Punica granatum HOM05D000004 ORTHO05D000002 3.1e-06 55.5 56 37.5
PGR115G0001 Punica granatum HOM05D000004 ORTHO05D000002 3.1e-06 55.5 56 37.5
PGR119G1513 Punica granatum HOM05D000004 ORTHO05D000002 3.1e-06 55.5 56 37.5
PGR119G1563 Punica granatum HOM05D000004 ORTHO05D000563 3.1e-06 55.5 56 37.5
PGR142G1811 Punica granatum HOM05D000004 ORTHO05D000002 3.1e-06 55.5 56 37.5
TPR.G40552 Trifolium pratense HOM05D000004 ORTHO05D000563 3.1e-06 55.5 48 50.0
Cpa.g.sc30.31 Carica papaya HOM05D000004 ORTHO05D000563 4.1e-06 55.1 110 35.5
Cpa.g.sc826.2 Carica papaya HOM05D000004 ORTHO05D000563 4.1e-06 55.1 103 35.0
THA.LOC104804981 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.1e-06 55.1 97 32.0
Cpa.g.sc372.2 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-06 54.7 94 37.2
Cpa.g.sc943.1 Carica papaya HOM05D000004 ORTHO05D000563 5.4e-06 54.7 35 74.3
PGR044G0113 Punica granatum HOM05D000004 ORTHO05D000563 5.4e-06 54.7 56 37.5
PGR044G1656 Punica granatum HOM05D000004 ORTHO05D000563 5.4e-06 54.7 56 37.5
PGR102G2704 Punica granatum HOM05D000004 ORTHO05D000002 5.4e-06 54.7 56 37.5
Cpa.g.sc38.73 Carica papaya HOM05D000004 ORTHO05D000563 7.0e-06 54.3 97 36.1
Cpa.g.sc41.26 Carica papaya HOM05D000004 ORTHO05D000563 7.0e-06 54.3 91 37.4
Lj5g0019047 Lotus japonicus HOM05D000004 ORTHO05D000563 7.0e-06 54.3 70 42.9
Cpa.g.sc251.2 Carica papaya HOM05D000004 ORTHO05D000563 9.1e-06 53.9 94 36.2
Cpa.g.sc3055.1 Carica papaya HOM05D000004 ORTHO05D000563 9.1e-06 53.9 71 39.4
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 9.1e-06 53.9 44 50.0
PGR102G0770 Punica granatum HOM05D000004 ORTHO05D000002 9.1e-06 53.9 56 35.7
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 9.1e-06 53.9 56 35.7
SHI01378 Sapria himalayana HOM05D000004 ORTHO05D000563 9.1e-06 53.9 44 50.0


User provided reference genes

Program Settings