Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c48349 Carica papaya HOM05D000141 ORTHO05D117086 9.3e-09 62.0 31 100.0
Cpa.g.sc3.512 Carica papaya HOM05D000141 ORTHO05D001860 9.3e-09 62.0 31 100.0
Lj5C148T5 Lonicera japonica HOM05D000141 ORTHO05D001860 2.3e-07 57.4 31 93.5
RcHm_v2.0_Chr7g0185441 Rosa chinensis HOM05D000141 ORTHO05D001860 3.0e-07 57.0 31 93.5
Ciclev10023895m.g Citrus clementina HOM05D000141 ORTHO05D001860 3.9e-07 56.6 31 93.5
CSS0005883 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001860 5.1e-07 56.2 31 90.3
CSS0009395 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001860 5.1e-07 56.2 31 90.3
Eucgr.B00722 Eucalyptus grandis HOM05D000141 ORTHO05D001860 5.1e-07 56.2 31 87.1
Glyma.08G041200 Glycine max HOM05D000141 ORTHO05D001860 5.1e-07 56.2 31 90.3
FvH4_5g12130 Fragaria vesca HOM05D000141 ORTHO05D001860 6.7e-07 55.8 31 90.3
FAN04G1298 Fragaria x ananassa HOM05D000141 ORTHO05D001860 6.7e-07 55.8 31 90.3
FAN08G0207 Fragaria x ananassa HOM05D000141 ORTHO05D001860 6.7e-07 55.8 31 90.3
FAN13G0310 Fragaria x ananassa HOM05D000141 ORTHO05D001860 6.7e-07 55.8 31 90.3
FAN18G0927 Fragaria x ananassa HOM05D000141 ORTHO05D001860 6.7e-07 55.8 31 90.3
FAN18G1630 Fragaria x ananassa HOM05D000141 ORTHO05D001860 6.7e-07 55.8 31 90.3
Glyma.05G233900 Glycine max HOM05D000141 ORTHO05D001860 6.7e-07 55.8 31 90.3
Lalb_Chr16g0387851 Lupinus albus HOM05D000141 ORTHO05D001860 8.7e-07 55.5 31 90.3
MD06G1216000 Malus domestica HOM05D000141 ORTHO05D001860 8.7e-07 55.5 31 90.3
MD14G1226600 Malus domestica HOM05D000141 ORTHO05D001860 8.7e-07 55.5 31 90.3
Hund02390 Selenicereus undatus HOM05D000141 ORTHO05D001860 8.7e-07 55.5 31 90.3
Manes.01G011700 Manihot esculenta HOM05D000141 ORTHO05D001860 1.1e-06 55.1 30 93.3
Medtr8g104200 Medicago truncatula HOM05D000141 ORTHO05D001860 1.1e-06 55.1 31 90.3
CAN.G423.9 Capsicum annuum HOM05D000141 ORTHO05D001860 1.5e-06 54.7 31 87.1
Nitab4.5_0000208g0230 Nicotiana tabacum HOM05D000141 ORTHO05D001860 1.5e-06 54.7 31 87.1
Nitab4.5_0001194g0050 Nicotiana tabacum HOM05D000141 ORTHO05D001860 1.5e-06 54.7 31 87.1
Nitab4.5_0007985g0030 Nicotiana tabacum HOM05D000141 ORTHO05D001860 1.5e-06 54.7 31 87.1
Oeu058029.1 Olea europaea HOM05D000141 ORTHO05D001860 1.5e-06 54.7 31 87.1
Peaxi162Scf00013g01026 Petunia axillaris HOM05D000141 ORTHO05D001860 1.5e-06 54.7 31 87.1
Potri.012G056700 Populus trichocarpa HOM05D000141 ORTHO05D001860 1.5e-06 54.7 29 96.6
PGR083G2430 Punica granatum HOM05D000141 ORTHO05D001860 1.5e-06 54.7 31 87.1
Sabra12G0040200 Salix brachista HOM05D000141 ORTHO05D001860 1.5e-06 54.7 29 96.6
Solyc06g069130.4 Solanum lycopersicum HOM05D000141 ORTHO05D001860 1.5e-06 54.7 31 87.1
Sopen06g026410 Solanum pennellii HOM05D000141 ORTHO05D001860 1.5e-06 54.7 31 87.1
PGSC0003DMG401028776 Solanum tuberosum HOM05D000141 ORTHO05D013114 1.5e-06 54.7 31 87.1
THA.LOC104812143 Tarenaya hassleriana HOM05D000141 ORTHO05D001860 1.5e-06 54.7 31 90.3
Cfa019777 Carpinus fangiana HOM05D000141 ORTHO05D001860 1.9e-06 54.3 31 87.1
Dinv28101 Davidia involucrata HOM05D000141 ORTHO05D001860 1.9e-06 54.3 31 83.9
Migut.D01472 Erythranthe guttata HOM05D000141 ORTHO05D001860 1.9e-06 54.3 31 83.9
Prupe.5G221200 Prunus persica HOM05D000141 ORTHO05D001860 1.9e-06 54.3 31 83.9
TAR629G2026 Trochodendron aralioides HOM05D000141 ORTHO05D001860 1.9e-06 54.3 31 87.1
Phvul.004G157000 Phaseolus vulgaris HOM05D000141 ORTHO05D001860 2.5e-06 53.9 31 87.1
SGA_v2.0_scaffold42G16030 Striga asiatica HOM05D000141 ORTHO05D001860 2.5e-06 53.9 31 83.9
TWI81G0735 Tripterygium wilfordii HOM05D000141 ORTHO05D001860 2.5e-06 53.9 30 90.0
Nitab4.5_0006638g0060 Nicotiana tabacum HOM05D000141 ORTHO05D001860 3.3e-06 53.5 31 83.9
Psat1g037560 Pisum sativum HOM05D000141 ORTHO05D001860 3.3e-06 53.5 29 93.1
Sc04g0003520 Simmondsia chinensis HOM05D000141 ORTHO05D001860 3.3e-06 53.5 31 87.1
CiPaw.16G086000 Carya illinoinensis HOM05D000141 ORTHO05D001860 4.3e-06 53.1 31 83.9
Haze_18673 Corylus avellana HOM05D000141 ORTHO05D001860 4.3e-06 53.1 31 83.9
Peaxi162Scf00634g00028 Petunia axillaris HOM05D000141 ORTHO05D001860 4.3e-06 53.1 31 83.9
Potri.015G047400 Populus trichocarpa HOM05D000141 ORTHO05D001860 4.3e-06 53.1 29 93.1
Sabra15G0074600 Salix brachista HOM05D000141 ORTHO05D001860 4.3e-06 53.1 29 93.1
VMungo0464G0312 Vigna mungo HOM05D000141 ORTHO05D001860 4.3e-06 53.1 31 87.1
Actinidia39829 Actinidia chinensis HOM05D000141 ORTHO05D001860 5.6e-06 52.8 31 83.9
COL.COLO4_11308 Corchorus olitorius HOM05D000141 ORTHO05D001860 5.6e-06 52.8 31 83.9
Thhalv10006662m.g Eutrema salsugineum HOM05D000141 ORTHO05D001860 5.6e-06 52.8 31 83.9
Lj4g0002174 Lotus japonicus HOM05D000141 ORTHO05D001860 5.6e-06 52.8 31 87.1
QL10p025322 Quercus lobata HOM05D000141 ORTHO05D001860 5.6e-06 52.8 31 83.9
Sp1g16360 Schrenkiella parvula HOM05D000141 ORTHO05D001860 5.6e-06 52.8 31 83.9
Atru.chr9.840 Acer truncatum HOM05D000141 ORTHO05D001860 7.4e-06 52.4 31 83.9
Aqoxy7G00325 Aquilegia oxysepala HOM05D000141 ORTHO05D001860 7.4e-06 52.4 31 80.6
CiPaw.11G135100 Carya illinoinensis HOM05D000141 ORTHO05D001860 7.4e-06 52.4 31 83.9
DCAR_023205 Daucus carota HOM05D000141 ORTHO05D001860 7.4e-06 52.4 31 80.6
Duzib084G1388 Durio zibethinus HOM05D000141 ORTHO05D001860 7.4e-06 52.4 31 87.1
Lj2g0007574 Lotus japonicus HOM05D000141 ORTHO05D001860 7.4e-06 52.4 31 83.9
Psat7g012000 Pisum sativum HOM05D000141 ORTHO05D001860 7.4e-06 52.4 31 83.9
arahy.Tifrunner.gnm1.ann1.75ML24 Arachis hypogaea HOM05D000141 ORTHO05D001860 9.6e-06 52.0 31 83.9
arahy.Tifrunner.gnm1.ann1.ZRIJ0L Arachis hypogaea HOM05D000141 ORTHO05D001860 9.6e-06 52.0 31 83.9
A07p39720 Brassica napus HOM05D000141 ORTHO05D001860 9.6e-06 52.0 31 83.9
C06p48010 Brassica napus HOM05D000141 ORTHO05D001860 9.6e-06 52.0 31 83.9
BolC6t39836H Brassica oleracea HOM05D000141 ORTHO05D001860 9.6e-06 52.0 31 83.9
BraA07t31521Z Brassica rapa HOM05D000141 ORTHO05D001860 9.6e-06 52.0 31 83.9
Cc04_g07120 Coffea canephora HOM05D000141 ORTHO05D001860 9.6e-06 52.0 31 80.6


User provided reference genes

Program Settings