Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c48203 Carica papaya HOM05D003970 ORTHO05D004615 6.4e-21 103.6 71 100.0
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 6.4e-21 103.6 71 100.0
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 4.1e-12 74.3 72 80.6
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 4.1e-12 74.3 72 80.6
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 4.1e-12 74.3 72 80.6
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 1.6e-11 72.4 72 79.2
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 2.7e-11 71.6 71 80.3
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 3.5e-11 71.2 66 83.3
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 3.5e-11 71.2 72 79.2
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 3.5e-11 71.2 73 78.1
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 6.0e-11 70.5 72 77.8
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 7.8e-11 70.1 71 76.1
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 1.0e-10 69.7 65 81.5
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 1.7e-10 68.9 71 77.5
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 1.7e-10 68.9 71 77.5
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 2.3e-10 68.6 71 71.8
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 2.3e-10 68.6 63 79.4
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 2.3e-10 68.6 71 70.4
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 3.0e-10 68.2 71 78.9
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 5.1e-10 67.4 71 77.5
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 5.1e-10 67.4 71 77.5
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 6.6e-10 67.0 71 69.0
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 6.6e-10 67.0 71 69.0
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 1.1e-09 66.2 71 71.8
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.1e-09 66.2 72 56.9
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.1e-09 66.2 71 76.1
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.5e-09 65.9 71 73.2
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 1.5e-09 65.9 59 86.4
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 1.9e-09 65.5 69 76.8
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 1.9e-09 65.5 70 75.7
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 3.3e-09 64.7 71 67.6
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 3.3e-09 64.7 72 75.0
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 4.3e-09 64.3 61 80.3
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 5.6e-09 63.9 72 75.0
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 7.3e-09 63.5 56 87.5
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 7.3e-09 63.5 72 75.0
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 7.3e-09 63.5 59 84.7
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 7.3e-09 63.5 58 82.8
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 7.3e-09 63.5 58 82.8
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 9.5e-09 63.2 58 84.5
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 9.5e-09 63.2 58 84.5
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 9.5e-09 63.2 58 84.5
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 1.2e-08 62.8 60 58.3
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 2.8e-08 61.6 71 73.2
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 2.8e-08 61.6 70 75.7
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.8e-08 61.6 58 82.8
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 2.8e-08 61.6 60 78.3
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 6.2e-08 60.5 60 58.3
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 6.2e-08 60.5 72 73.6
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 6.2e-08 60.5 70 72.9
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 6.2e-08 60.5 72 75.0
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 6.2e-08 60.5 58 84.5
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 8.1e-08 60.1 59 83.1
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 8.1e-08 60.1 71 53.5
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.1e-07 59.7 71 67.6
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 1.1e-07 59.7 63 71.4
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 1.1e-07 59.7 72 75.0
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 3.1e-07 58.2 71 50.7
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 3.1e-07 58.2 65 53.8
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 4.0e-07 57.8 68 52.9
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 5.2e-07 57.4 58 81.0
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 6.8e-07 57.0 72 70.8
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 6.8e-07 57.0 72 70.8
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 6.8e-07 57.0 66 74.2
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 6.8e-07 57.0 57 57.9
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 6.8e-07 57.0 57 57.9
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 1.2e-06 56.2 71 70.4
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 1.2e-06 56.2 57 84.2
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 1.2e-06 56.2 57 84.2
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.5e-06 55.8 72 66.7
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 2.0e-06 55.5 71 63.4
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 2.0e-06 55.5 58 77.6
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 3.4e-06 54.7 71 46.5
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 3.4e-06 54.7 71 46.5
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 3.4e-06 54.7 72 65.3
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 4.4e-06 54.3 72 58.3
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 5.8e-06 53.9 61 70.5
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 7.6e-06 53.5 71 67.6
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 7.6e-06 53.5 63 50.8


User provided reference genes

Program Settings