Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c48138 Carica papaya HOM05D000574 ORTHO05D004834 6.7e-103 377.5 208 100.0
Cpa.g.sc115.68 Carica papaya HOM05D000574 ORTHO05D004834 4.8e-93 344.7 191 100.0
Dinv25452 Davidia involucrata HOM05D000574 ORTHO05D004834 4.3e-41 172.2 197 51.8
Dinv41189 Davidia involucrata HOM05D000574 ORTHO05D004834 2.0e-38 163.3 195 51.3
Duzib150G1101 Durio zibethinus HOM05D000574 ORTHO05D004834 2.6e-38 162.9 195 51.8
Atru.chr7.939 Acer truncatum HOM05D000574 ORTHO05D004834 2.2e-37 159.8 192 51.0
Potri.018G140900 Populus trichocarpa HOM05D000574 ORTHO05D004834 1.4e-36 157.1 194 50.5
Potri.006G073800 Populus trichocarpa HOM05D000574 ORTHO05D004834 1.9e-36 156.8 194 49.5
Duzib168G2367 Durio zibethinus HOM05D000574 ORTHO05D004834 4.1e-36 155.6 195 52.3
Ciclev10007337m.g Citrus clementina HOM05D000574 ORTHO05D004834 3.5e-35 152.5 196 48.5
Manes.14G163200 Manihot esculenta HOM05D000574 ORTHO05D004834 4.6e-35 152.1 199 47.7
QL02p047225 Quercus lobata HOM05D000574 ORTHO05D004834 1.0e-34 151.0 199 47.7
GSVIVG01029304001 Vitis vinifera HOM05D000574 ORTHO05D004834 1.3e-34 150.6 194 47.9
Sabra06G0055000 Salix brachista HOM05D000574 ORTHO05D004834 2.3e-34 149.8 194 49.5
Sabra18G0115100 Salix brachista HOM05D000574 ORTHO05D004834 2.3e-34 149.8 193 48.7
CiPaw.08G032000 Carya illinoinensis HOM05D000574 ORTHO05D004834 3.9e-34 149.1 196 48.0
CiPaw.07G198200 Carya illinoinensis HOM05D000574 ORTHO05D004834 8.6e-34 147.9 197 47.2
Manes.06G018300 Manihot esculenta HOM05D000574 ORTHO05D004834 3.6e-32 142.5 192 47.9
Prupe.1G073700 Prunus persica HOM05D000574 ORTHO05D004834 1.4e-31 140.6 202 46.5
Eucgr.C00101 Eucalyptus grandis HOM05D000574 ORTHO05D004834 2.6e-30 136.3 196 42.9
Phvul.009G235300 Phaseolus vulgaris HOM05D000574 ORTHO05D004834 5.8e-30 135.2 203 44.3
VMungo1309G2517 Vigna mungo HOM05D000574 ORTHO05D004834 1.3e-29 134.0 203 43.8
MD00G1086800 Malus domestica HOM05D000574 ORTHO05D004834 3.8e-29 132.5 197 43.7
Oeu018826.1 Olea europaea HOM05D000574 ORTHO05D004834 1.1e-28 131.0 191 40.3
vmacro05991 Vaccinium macrocarpon HOM05D000574 ORTHO05D004834 1.6e-27 127.1 195 43.6
CSS0001018 Camellia sinensis var. sinensis HOM05D000574 ORTHO05D004834 2.1e-27 126.7 206 39.3
Actinidia07551 Actinidia chinensis HOM05D000574 ORTHO05D004834 3.5e-27 125.9 196 41.8
FAN12G1755 Fragaria x ananassa HOM05D000574 ORTHO05D004834 4.6e-27 125.6 198 43.9
MD16G1247100 Malus domestica HOM05D000574 ORTHO05D004834 6.0e-27 125.2 200 42.5
FAN07G2076 Fragaria x ananassa HOM05D000574 ORTHO05D004834 7.8e-27 124.8 198 43.4
FAN22G2359 Fragaria x ananassa HOM05D000574 ORTHO05D004834 7.8e-27 124.8 198 43.4
FAN17G2351 Fragaria x ananassa HOM05D000574 ORTHO05D004834 1.0e-26 124.4 198 43.9
Gorai.013G242700 Gossypium raimondii HOM05D000574 ORTHO05D004834 1.0e-26 124.4 191 44.0
RcHm_v2.0_Chr4g0399171 Rosa chinensis HOM05D000574 ORTHO05D004834 1.0e-26 124.4 198 43.4
Haze_22040 Corylus avellana HOM05D000574 ORTHO05D004834 1.3e-26 124.0 196 44.9
Actinidia02496 Actinidia chinensis HOM05D000574 ORTHO05D004834 1.7e-26 123.6 196 41.3
Rhsim03G0267500 Rhododendron simsii HOM05D000574 ORTHO05D004834 1.7e-26 123.6 195 42.1
PGSC0003DMG400004086 Solanum tuberosum HOM05D000574 ORTHO05D004834 1.7e-26 123.6 196 38.8
Thecc.09G187800 Theobroma cacao HOM05D000574 ORTHO05D004834 3.0e-26 122.9 194 43.3
Glyma.15G167000 Glycine max HOM05D000574 ORTHO05D004834 3.9e-26 122.5 207 43.5
Cc06_g17450 Coffea canephora HOM05D000574 ORTHO05D004834 8.7e-26 121.3 193 39.9
Lj6g0006401 Lotus japonicus HOM05D000574 ORTHO05D004834 8.7e-26 121.3 203 43.8
FvH4_4g07050 Fragaria vesca HOM05D000574 ORTHO05D004834 1.1e-25 120.9 198 43.4
Gohir.A13G207900 Gossypium hirsutum HOM05D000574 ORTHO05D004834 1.5e-25 120.6 190 43.2
Nitab4.5_0000056g0010 Nicotiana tabacum HOM05D000574 ORTHO05D004834 1.5e-25 120.6 195 38.5
TAR383G0266 Trochodendron aralioides HOM05D000574 ORTHO05D004834 1.5e-25 120.6 199 40.7
Gohir.D13G212400 Gossypium hirsutum HOM05D000574 ORTHO05D004834 1.9e-25 120.2 191 42.4
Glyma.09G060500 Glycine max HOM05D000574 ORTHO05D004834 3.3e-25 119.4 208 42.3
Sopen07g006950 Solanum pennellii HOM05D000574 ORTHO05D004834 3.3e-25 119.4 196 38.8
Medtr2g038200 Medicago truncatula HOM05D000574 ORTHO05D004834 4.3e-25 119.0 196 42.9
Nn8g40676 Nelumbo nucifera HOM05D000574 ORTHO05D004834 4.3e-25 119.0 213 39.9
Nitab4.5_0001415g0020 Nicotiana tabacum HOM05D000574 ORTHO05D004834 5.6e-25 118.6 196 38.8
THA.LOC104817771 Tarenaya hassleriana HOM05D000574 ORTHO05D004834 5.6e-25 118.6 191 40.8
Solyc07g018070.4 Solanum lycopersicum HOM05D000574 ORTHO05D004834 7.3e-25 118.2 196 38.8
CANSAT01G1160 Cannabis sativa HOM05D000574 ORTHO05D004834 2.1e-24 116.7 221 38.5
Peaxi162Scf00231g00915 Petunia axillaris HOM05D000574 ORTHO05D004834 1.4e-23 114.0 197 37.6
Oeu020575.1 Olea europaea HOM05D000574 ORTHO05D004834 4.0e-23 112.5 193 36.8
Psat1g144800 Pisum sativum HOM05D000574 ORTHO05D004834 5.3e-23 112.1 200 41.5
MELO3C003958.2 Cucumis melo HOM05D000574 ORTHO05D004834 9.0e-23 111.3 196 38.8
CsaV3_2G008820 Cucumis sativus L. HOM05D000574 ORTHO05D004834 9.0e-23 111.3 196 38.3
CAN.G33.17 Capsicum annuum HOM05D000574 ORTHO05D004834 1.2e-22 110.9 192 36.5
PGR044G1524 Punica granatum HOM05D000574 ORTHO05D004834 1.5e-22 110.5 200 42.5
THA.LOC104814648 Tarenaya hassleriana HOM05D000574 ORTHO05D004834 5.8e-22 108.6 198 39.9
TPR.G31048 Trifolium pratense HOM05D000574 ORTHO05D004834 5.8e-22 108.6 195 38.5
TAR626G1540 Trochodendron aralioides HOM05D000574 ORTHO05D004834 9.9e-22 107.8 196 36.2
TAR626G1471 Trochodendron aralioides HOM05D000574 ORTHO05D004834 1.3e-21 107.5 196 36.2
Sed0008059 Sechium edule HOM05D000574 ORTHO05D004834 1.7e-21 107.1 199 40.2
DCAR_020145 Daucus carota HOM05D000574 ORTHO05D004834 2.2e-21 106.7 193 36.8
Ca_02120_v3 Cicer arietinum L. HOM05D000574 ORTHO05D004834 4.2e-20 102.4 201 35.3
MSTRG.19366 Avicennia marina HOM05D000574 ORTHO05D004834 5.4e-20 102.1 193 36.3
ClCG11G011650 Citrullus lanatus HOM05D000574 ORTHO05D004834 1.6e-19 100.5 196 36.7
CARHR237840 Cardamine hirsuta HOM05D000574 ORTHO05D004834 7.8e-19 98.2 225 37.8
Sp7g27730 Schrenkiella parvula HOM05D000574 ORTHO05D004834 2.3e-18 96.7 219 37.4
BolC3t21212H Brassica oleracea HOM05D000574 ORTHO05D004834 3.9e-18 95.9 212 37.3
C03p89020 Brassica napus HOM05D000574 ORTHO05D004834 5.1e-18 95.5 212 35.8
AL7G22320 Arabidopsis lyrata HOM05D000574 ORTHO05D004834 6.6e-18 95.1 216 36.6
Thhalv10024298m.g Eutrema salsugineum HOM05D000574 ORTHO05D004834 6.6e-18 95.1 216 36.6
A08p19500 Brassica napus HOM05D000574 ORTHO05D004834 1.1e-17 94.4 212 37.3
BraA08t33911Z Brassica rapa HOM05D000574 ORTHO05D004834 1.1e-17 94.4 212 37.3
BcaB03g12625 Brassica carinata HOM05D000574 ORTHO05D004834 1.5e-17 94.0 215 35.8
BcaC01g01202 Brassica carinata HOM05D000574 ORTHO05D004834 1.5e-17 94.0 212 37.3
PSO063G3889 Papaver somniferum HOM05D000574 ORTHO05D004834 2.5e-17 93.2 192 34.9
TWI34G0712 Tripterygium wilfordii HOM05D000574 ORTHO05D004834 2.5e-17 93.2 199 37.7
A01p08200 Brassica napus HOM05D000574 ORTHO05D004834 4.3e-17 92.4 218 35.3
Carub.0007s1072 Capsella rubella HOM05D000574 ORTHO05D004834 4.3e-17 92.4 216 37.0
AT4G29920 Arabidopsis thaliana HOM05D000574 ORTHO05D004834 5.6e-17 92.0 212 34.4
BcaC09g51774 Brassica carinata HOM05D000574 ORTHO05D004834 2.8e-16 89.7 214 36.0
Glyma.17G058400 Glycine max HOM05D000574 ORTHO05D004834 4.8e-16 89.0 195 34.9
Lju170A20G16 Lonicera japonica HOM05D000574 ORTHO05D004834 4.8e-16 89.0 204 35.8
BcaC09g52234 Brassica carinata HOM05D000574 ORTHO05D004834 6.2e-16 88.6 210 35.7
C01p09160 Brassica napus HOM05D000574 ORTHO05D004834 6.2e-16 88.6 210 35.7
BolC1t00907H Brassica oleracea HOM05D000574 ORTHO05D004834 6.2e-16 88.6 210 35.7
VMungo1215G2189 Vigna mungo HOM05D000574 ORTHO05D004834 6.2e-16 88.6 195 35.9
PSO170G5277 Papaver somniferum HOM05D000574 ORTHO05D004834 8.1e-16 88.2 192 33.9
arahy.Tifrunner.gnm1.ann1.E7V948 Arachis hypogaea HOM05D000574 ORTHO05D004834 6.9e-15 85.1 205 35.1
MBI14_g10720_MAGBIO Magnolia biondii HOM05D000574 ORTHO05D004834 6.9e-15 85.1 146 37.7
arahy.Tifrunner.gnm1.ann1.A8H1KI Arachis hypogaea HOM05D000574 ORTHO05D004834 1.2e-14 84.3 206 35.0
HanXRQChr10g0308871 Helianthus annuus HOM05D000574 ORTHO05D004834 1.2e-14 84.3 207 36.7
Glyma.13G101300 Glycine max HOM05D000574 ORTHO05D004834 1.5e-14 84.0 195 33.3
Lsat_1_v5_gn_5_83241 Lactuca sativa HOM05D000574 ORTHO05D004834 3.4e-14 82.8 206 34.0
Aqoxy7G02882 Aquilegia oxysepala HOM05D000574 ORTHO05D004834 7.6e-14 81.6 199 34.7
BraA01t00766Z Brassica rapa HOM05D000574 ORTHO05D004834 7.6e-14 81.6 215 34.0
Lalb_Chr07g0180691 Lupinus albus HOM05D000574 ORTHO05D004834 7.6e-14 81.6 194 35.6
Sp6g18860 Schrenkiella parvula HOM05D000574 ORTHO05D004834 1.7e-13 80.5 195 34.9
MSTRG.10436 Avicennia marina HOM05D000574 ORTHO05D004834 2.9e-13 79.7 196 33.7
Thhalv10012549m.g Eutrema salsugineum HOM05D000574 ORTHO05D004834 2.9e-13 79.7 191 35.6
SGA_v2.0_scaffold112G31611 Striga asiatica HOM05D000574 ORTHO05D004834 3.8e-13 79.3 198 32.3
Carub.0008s1764 Capsella rubella HOM05D000574 ORTHO05D004834 6.4e-13 78.6 192 35.9
Sed0021866 Sechium edule HOM05D000574 ORTHO05D004834 6.4e-13 78.6 149 36.2
arahy.Tifrunner.gnm1.ann1.WDF2TS Arachis hypogaea HOM05D000574 ORTHO05D004834 1.1e-12 77.8 198 31.3
AL8G33060 Arabidopsis lyrata HOM05D000574 ORTHO05D004834 2.4e-12 76.6 195 33.8
Aa31LG3G13030 Aethionema arabicum HOM05D002074 ORTHO05D004834 3.2e-12 76.3 193 34.7
Sed0027649 Sechium edule HOM05D000574 ORTHO05D004834 3.2e-12 76.3 149 36.2
Aa31LG2G20630 Aethionema arabicum HOM05D000574 ORTHO05D004834 7.1e-12 75.1 202 33.7
unitig_699.g19408 Utricularia gibba HOM05D000574 ORTHO05D004834 1.2e-11 74.3 189 29.6
Ca_21258_v3 Cicer arietinum L. HOM05D000574 ORTHO05D004834 2.1e-11 73.6 196 29.1
SalBow5G0144 Salvia bowleyana HOM05D000574 ORTHO05D004834 2.7e-11 73.2 142 35.2
SalBow5G1874 Salvia bowleyana HOM05D000574 ORTHO05D004834 2.7e-11 73.2 142 35.2
ECA234G0877 Erigeron canadensis HOM05D000574 ORTHO05D004834 4.6e-11 72.4 206 33.0
ClCG06G013680 Citrullus lanatus HOM05D000574 ORTHO05D004834 6.0e-11 72.0 180 33.9
AT5G57130 Arabidopsis thaliana HOM05D000574 ORTHO05D004834 7.9e-11 71.6 195 34.4
COL.COLO4_23438 Corchorus olitorius HOM05D000574 ORTHO05D004834 1.8e-10 70.5 116 45.7
MELO3C017420.2 Cucumis melo HOM05D000574 ORTHO05D004834 2.3e-10 70.1 178 34.3
Migut.J00789 Erythranthe guttata HOM05D000574 ORTHO05D004834 2.3e-10 70.1 133 39.1
arahy.Tifrunner.gnm1.ann1.M4LRUB Arachis hypogaea HOM05D000574 ORTHO05D004834 3.9e-10 69.3 200 31.5
CsaV3_1G031950 Cucumis sativus L. HOM05D000574 ORTHO05D004834 8.7e-10 68.2 145 35.9
HanXRQChr12g0358481 Helianthus annuus HOM05D000574 ORTHO05D004834 1.5e-09 67.4 206 29.1
CARHR270910 Cardamine hirsuta HOM05D000574 ORTHO05D004834 5.6e-09 65.5 133 39.1
TPR.G5385 Trifolium pratense HOM05D000574 ORTHO05D004834 9.6e-09 64.7 202 27.7
BraA10t43538Z Brassica rapa HOM05D000574 ORTHO05D004834 3.7e-08 62.8 196 31.1
BcaB08g35999 Brassica carinata HOM05D000574 ORTHO05D004834 4.8e-08 62.4 196 30.6
Medtr4g127290 Medicago truncatula HOM05D000574 ORTHO05D004834 4.8e-08 62.4 196 27.6
BolC9t57739H Brassica oleracea HOM05D000574 ORTHO05D004834 6.2e-08 62.0 198 29.3
A10p14480 Brassica napus HOM05D000574 ORTHO05D004834 1.1e-07 61.2 196 31.1
ATR0580G287 Amborella trichopoda HOM05D000574 ORTHO05D004834 1.8e-07 60.5 171 32.7
BcaC04g20006 Brassica carinata HOM05D000574 ORTHO05D004834 3.1e-07 59.7 198 29.3
Lalb_Chr08g0231951 Lupinus albus HOM05D000574 ORTHO05D004834 3.1e-07 59.7 159 32.1
Psat4g013520 Pisum sativum HOM05D000574 ORTHO05D004834 4.0e-07 59.3 199 30.2
C09p48900 Brassica napus HOM05D000574 ORTHO05D004834 5.3e-07 58.9 198 29.3
BcaC03g14179 Brassica carinata HOM05D000574 ORTHO05D004834 9.0e-07 58.2 193 29.5
C02p14540 Brassica napus HOM05D000574 ORTHO05D004834 9.0e-07 58.2 193 29.5
BolC2t07578H Brassica oleracea HOM05D000574 ORTHO05D004834 9.0e-07 58.2 193 29.5
Phvul.003G140726 Phaseolus vulgaris HOM05D000574 ORTHO05D004834 2.0e-06 57.0 117 36.8
A02p08700 Brassica napus HOM05D000574 ORTHO05D004834 5.8e-06 55.5 193 28.0
BraA02t05940Z Brassica rapa HOM05D000574 ORTHO05D004834 5.8e-06 55.5 193 28.0


User provided reference genes

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