Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c48088 Carica papaya HOM05D000141 ORTHO05D013114 7.2e-40 166.8 83 100.0
TWI60G0408 Tripterygium wilfordii HOM05D000141 ORTHO05D001860 5.7e-13 77.4 87 54.0
Cfa019777 Carpinus fangiana HOM05D000141 ORTHO05D001860 2.2e-12 75.5 77 58.4
Haze_18673 Corylus avellana HOM05D000141 ORTHO05D001860 1.1e-11 73.2 89 52.8
Atru.chr9.840 Acer truncatum HOM05D000141 ORTHO05D001860 9.1e-11 70.1 77 51.9
COL.COLO4_11308 Corchorus olitorius HOM05D000141 ORTHO05D001860 1.6e-10 69.3 75 53.3
Duzib084G1388 Durio zibethinus HOM05D000141 ORTHO05D001860 2.7e-10 68.6 76 53.9
Prupe.5G221200 Prunus persica HOM05D000141 ORTHO05D001860 4.5e-10 67.8 89 50.6
TWI81G0735 Tripterygium wilfordii HOM05D000141 ORTHO05D001860 1.0e-09 66.6 87 51.7
CiPaw.16G086000 Carya illinoinensis HOM05D000141 ORTHO05D001860 3.8e-09 64.7 88 47.7
Gohir.A09G047800 Gossypium hirsutum HOM05D000141 ORTHO05D001860 6.5e-09 63.9 51 60.8
Gorai.006G061000 Gossypium raimondii HOM05D000141 ORTHO05D001860 6.5e-09 63.9 51 60.8
FAN04G1298 Fragaria x ananassa HOM05D000141 ORTHO05D001860 2.5e-08 62.0 87 51.7
FAN13G0310 Fragaria x ananassa HOM05D000141 ORTHO05D001860 2.5e-08 62.0 87 51.7
FvH4_5g12130 Fragaria vesca HOM05D000141 ORTHO05D001860 3.2e-08 61.6 87 50.6
FAN18G0927 Fragaria x ananassa HOM05D000141 ORTHO05D001860 3.2e-08 61.6 87 50.6
FAN18G1630 Fragaria x ananassa HOM05D000141 ORTHO05D001860 3.2e-08 61.6 87 50.6
PGSC0003DMG401028776 Solanum tuberosum HOM05D000141 ORTHO05D013114 7.2e-08 60.5 87 44.8
vmacro17717 Vaccinium macrocarpon HOM05D000141 ORTHO05D001860 9.4e-08 60.1 65 47.7
FAN08G0207 Fragaria x ananassa HOM05D000141 ORTHO05D001860 1.2e-07 59.7 87 49.4
Cc04_g07120 Coffea canephora HOM05D000141 ORTHO05D001860 1.6e-07 59.3 39 61.5
Rhsim08G0134600 Rhododendron simsii HOM05D000141 ORTHO05D001860 1.6e-07 59.3 61 49.2
Potri.012G056700 Populus trichocarpa HOM05D000141 ORTHO05D001860 2.1e-07 58.9 78 48.7
EL10Ac5g11437 Beta vulgaris HOM05D000141 ORTHO05D001860 3.6e-07 58.2 71 40.8
Lj4g0002174 Lotus japonicus HOM05D000141 ORTHO05D001860 3.6e-07 58.2 82 47.6
Manes.01G011700 Manihot esculenta HOM05D000141 ORTHO05D001860 3.6e-07 58.2 66 45.5
Solyc06g069130.4 Solanum lycopersicum HOM05D000141 ORTHO05D001860 4.7e-07 57.8 87 42.5
Sopen06g026410 Solanum pennellii HOM05D000141 ORTHO05D001860 4.7e-07 57.8 87 42.5
Eucgr.B00722 Eucalyptus grandis HOM05D000141 ORTHO05D001860 6.1e-07 57.4 56 53.6
TPR.G32706 Trifolium pratense HOM05D000141 ORTHO05D001860 8.0e-07 57.0 75 41.3
CAN.G423.9 Capsicum annuum HOM05D000141 ORTHO05D001860 1.0e-06 56.6 45 55.6
Nitab4.5_0006638g0060 Nicotiana tabacum HOM05D000141 ORTHO05D001860 1.4e-06 56.2 57 42.1
SHI26929 Sapria himalayana HOM05D000141 ORTHO05D013114 1.4e-06 56.2 85 44.7
AUR62025894 Chenopodium quinoa HOM05D000141 ORTHO05D001860 1.8e-06 55.8 71 42.3
Ca_25448_v3 Cicer arietinum L. HOM05D000141 ORTHO05D001860 1.8e-06 55.8 83 41.0
MD06G1216000 Malus domestica HOM05D000141 ORTHO05D001860 1.8e-06 55.8 86 47.7
Sabra12G0040200 Salix brachista HOM05D000141 ORTHO05D001860 2.3e-06 55.5 62 51.6
CSS0005883 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001860 4.0e-06 54.7 62 46.8
CSS0009395 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001860 4.0e-06 54.7 62 46.8
AUR62029862 Chenopodium quinoa HOM05D000141 ORTHO05D001860 4.0e-06 54.7 69 44.9
MD14G1226600 Malus domestica HOM05D000141 ORTHO05D001860 5.2e-06 54.3 89 44.9
Psat7g012000 Pisum sativum HOM05D000141 ORTHO05D001860 5.2e-06 54.3 53 50.9
Migut.D01472 Erythranthe guttata HOM05D000141 ORTHO05D001860 6.8e-06 53.9 88 40.9
Medtr8g104200 Medicago truncatula HOM05D000141 ORTHO05D001860 6.8e-06 53.9 55 50.9
GSVIVG01008287001 Vitis vinifera HOM05D000141 ORTHO05D001860 6.8e-06 53.9 86 41.9
Nitab4.5_0001194g0050 Nicotiana tabacum HOM05D000141 ORTHO05D001860 8.8e-06 53.5 51 49.0
Peaxi162Scf00013g01026 Petunia axillaris HOM05D000141 ORTHO05D001860 8.8e-06 53.5 56 44.6
Sabra15G0074600 Salix brachista HOM05D000141 ORTHO05D001860 8.8e-06 53.5 84 47.6


User provided reference genes

Program Settings