Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c47754 Carica papaya HOM05D001447 ORTHO05D043541 1.1e-30 136.0 69 100.0
Thecc.06G175800 Theobroma cacao HOM05D001447 ORTHO05D005061 5.4e-17 90.5 66 71.2
QL05p044197 Quercus lobata HOM05D001447 ORTHO05D005061 1.6e-16 89.0 69 71.0
Cfa000573 Carpinus fangiana HOM05D001447 ORTHO05D005061 2.7e-16 88.2 69 72.5
CiPaw.09G067200 Carya illinoinensis HOM05D001447 ORTHO05D005061 3.5e-16 87.8 69 66.7
CANSAT35G0876 Cannabis sativa HOM05D001447 ORTHO05D005061 6.0e-16 87.0 69 72.5
Haze_06277 Corylus avellana HOM05D001447 ORTHO05D005061 1.3e-15 85.9 69 71.0
CiPaw.10G056900 Carya illinoinensis HOM05D001447 ORTHO05D005061 1.7e-15 85.5 67 68.7
TWI63G0441 Tripterygium wilfordii HOM05D001447 ORTHO05D005061 5.1e-15 84.0 69 66.7
COL.COLO4_31349 Corchorus olitorius HOM05D001447 ORTHO05D005061 6.6e-15 83.6 69 69.6
TWI38G2261 Tripterygium wilfordii HOM05D001447 ORTHO05D005061 6.6e-15 83.6 69 65.2
Duzib192G0898 Durio zibethinus HOM05D001447 ORTHO05D005061 1.5e-14 82.4 69 66.7
Atru.chr10.1729 Acer truncatum HOM05D001447 ORTHO05D005061 2.5e-14 81.6 71 69.0
Gohir.A10G030400 Gossypium hirsutum HOM05D001447 ORTHO05D005061 4.3e-14 80.9 69 66.7
Dinv17393 Davidia involucrata HOM05D001447 ORTHO05D005061 5.6e-14 80.5 67 70.1
Gohir.D10G031300 Gossypium hirsutum HOM05D001447 ORTHO05D005061 5.6e-14 80.5 69 66.7
Dinv04637 Davidia involucrata HOM05D001447 ORTHO05D005061 1.6e-13 79.0 67 68.7
Gorai.011G032900 Gossypium raimondii HOM05D001447 ORTHO05D005061 1.6e-13 79.0 69 65.2
Prupe.4G057500 Prunus persica HOM05D001447 ORTHO05D005061 5.3e-12 73.9 67 65.7
Manes.17G053100 Manihot esculenta HOM05D001447 ORTHO05D005061 1.2e-11 72.8 65 63.1
GSVIVG01021169001 Vitis vinifera HOM05D001447 ORTHO05D005061 1.2e-11 72.8 73 64.4
Actinidia07629 Actinidia chinensis HOM05D001447 ORTHO05D005061 3.4e-11 71.2 67 58.2
CSS0004540 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005061 5.8e-11 70.5 67 61.2
Ciclev10015348m.g Citrus clementina HOM05D001447 ORTHO05D005061 9.9e-11 69.7 72 65.3
Gohir.A06G200700 Gossypium hirsutum HOM05D001447 ORTHO05D005061 1.3e-10 69.3 70 60.0
Eucgr.D00551 Eucalyptus grandis HOM05D001447 ORTHO05D005061 2.2e-10 68.6 69 60.9
Hma1.2p1_0155F.1_g068420 Hydrangea macrophylla HOM05D001447 ORTHO05D005061 2.2e-10 68.6 67 58.2
Lj6g0004465 Lotus japonicus HOM05D001447 ORTHO05D005061 3.8e-10 67.8 69 62.3
PGR004G1605 Punica granatum HOM05D001447 ORTHO05D005061 3.8e-10 67.8 70 57.1
PGR046G0002 Punica granatum HOM05D001447 ORTHO05D005061 3.8e-10 67.8 70 57.1
TAR629G1481 Trochodendron aralioides HOM05D001447 ORTHO05D043541 4.9e-10 67.4 67 58.2
FvH4_3g08130 Fragaria vesca HOM05D001447 ORTHO05D005061 6.4e-10 67.0 69 59.4
Manes.16G035500 Manihot esculenta HOM05D001447 ORTHO05D005061 6.4e-10 67.0 67 58.2
Gorai.010G242400 Gossypium raimondii HOM05D001447 ORTHO05D005061 8.4e-10 66.6 70 58.6
Lj1A1196T40 Lonicera japonica HOM05D001447 ORTHO05D005061 8.4e-10 66.6 67 56.7
Nitab4.5_0005897g0020 Nicotiana tabacum HOM05D001447 ORTHO05D005061 8.4e-10 66.6 71 57.7
RcHm_v2.0_Chr5g0010061 Rosa chinensis HOM05D001447 ORTHO05D005061 8.4e-10 66.6 69 59.4
AT4G18480 Arabidopsis thaliana HOM05D001447 ORTHO05D005061 1.4e-09 65.9 69 58.0
Nitab4.5_0006237g0030 Nicotiana tabacum HOM05D001447 ORTHO05D005061 1.4e-09 65.9 72 56.9
FAN11G0520 Fragaria x ananassa HOM05D001447 ORTHO05D005061 1.9e-09 65.5 69 58.0
FAN16G1600 Fragaria x ananassa HOM05D001447 ORTHO05D005061 2.4e-09 65.1 69 58.0
AL7G35800 Arabidopsis lyrata HOM05D001447 ORTHO05D005061 3.2e-09 64.7 69 56.5
Glyma.13G232500 Glycine max HOM05D001447 ORTHO05D005061 4.2e-09 64.3 69 58.0
Glyma.15G080200 Glycine max HOM05D001447 ORTHO05D005061 4.2e-09 64.3 69 58.0
Gohir.D06G208200 Gossypium hirsutum HOM05D001447 ORTHO05D005061 4.2e-09 64.3 70 57.1
Cc07_g18500 Coffea canephora HOM05D001447 ORTHO05D005061 5.4e-09 63.9 72 52.8
FAN21G0087 Fragaria x ananassa HOM05D001447 ORTHO05D005061 5.4e-09 63.9 69 58.0
MD05G1304900 Malus domestica HOM05D001447 ORTHO05D005061 5.4e-09 63.9 68 63.2
FAN25G0670 Fragaria x ananassa HOM05D001447 ORTHO05D005061 7.1e-09 63.5 69 58.0
MD10G1284000 Malus domestica HOM05D001447 ORTHO05D005061 7.1e-09 63.5 68 63.2
PGSC0003DMG400026627 Solanum tuberosum HOM05D001447 ORTHO05D005061 1.2e-08 62.8 71 54.9
COL.COLO4_36107 Corchorus olitorius HOM05D001447 ORTHO05D005061 2.1e-08 62.0 54 61.1
Lsat_1_v5_gn_4_50480 Lactuca sativa HOM05D001447 ORTHO05D005061 2.1e-08 62.0 70 57.1
C01p12430 Brassica napus HOM05D001447 ORTHO05D005061 3.5e-08 61.2 69 56.5
Eucgr.D00547 Eucalyptus grandis HOM05D001447 ORTHO05D005061 3.5e-08 61.2 69 55.1
Sabra04G0034800 Salix brachista HOM05D001447 ORTHO05D005061 3.5e-08 61.2 67 53.7
VMungo0540G1497 Vigna mungo HOM05D001447 ORTHO05D005061 3.5e-08 61.2 70 57.1
BolC1t01217H Brassica oleracea HOM05D001447 ORTHO05D005061 4.6e-08 60.8 69 55.1
AUR62031140 Chenopodium quinoa HOM05D001447 ORTHO05D005061 4.6e-08 60.8 72 54.2
HanXRQChr17g0556041 Helianthus annuus HOM05D001447 ORTHO05D005061 4.6e-08 60.8 70 55.7
A01p10450 Brassica napus HOM05D001447 ORTHO05D005061 6.0e-08 60.5 69 55.1
BraA01t00991Z Brassica rapa HOM05D001447 ORTHO05D005061 6.0e-08 60.5 69 55.1
Potri.004G053400 Populus trichocarpa HOM05D001447 ORTHO05D005061 6.0e-08 60.5 67 53.7
Carub.0007s2275 Capsella rubella HOM05D001447 ORTHO05D005061 7.9e-08 60.1 71 52.1
Nn4g22114 Nelumbo nucifera HOM05D001447 ORTHO05D005061 7.9e-08 60.1 67 52.2
Solyc10g008740.3 Solanum lycopersicum HOM05D001447 ORTHO05D005061 7.9e-08 60.1 71 53.5
CARHR225320 Cardamine hirsuta HOM05D001447 ORTHO05D005061 1.3e-07 59.3 70 57.1
AUR62036545 Chenopodium quinoa HOM05D001447 ORTHO05D005061 1.3e-07 59.3 72 52.8
Peaxi162Scf00269g00514 Petunia axillaris HOM05D001447 ORTHO05D005061 1.3e-07 59.3 73 58.9
BcaC09g51503 Brassica carinata HOM05D001447 ORTHO05D005061 2.3e-07 58.5 69 53.6
Sopen10g004510 Solanum pennellii HOM05D001447 ORTHO05D005061 2.3e-07 58.5 72 52.8
CAN.G168.8 Capsicum annuum HOM05D001447 ORTHO05D005061 3.0e-07 58.2 72 55.6
Migut.M01066 Erythranthe guttata HOM05D001447 ORTHO05D005061 3.0e-07 58.2 69 53.6
Thhalv10025291m.g Eutrema salsugineum HOM05D001447 ORTHO05D005061 3.9e-07 57.8 69 53.6
DCAR_004025 Daucus carota HOM05D001447 ORTHO05D005061 5.1e-07 57.4 68 55.9
Rhsim02G0140300 Rhododendron simsii HOM05D001447 ORTHO05D005061 5.1e-07 57.4 67 50.7
Potri.011G063400 Populus trichocarpa HOM05D001447 ORTHO05D005061 1.1e-06 56.2 68 57.4
THA.LOC104806148 Tarenaya hassleriana HOM05D001447 ORTHO05D005061 1.5e-06 55.8 71 50.7
Aa31LG6G1230 Aethionema arabicum HOM05D001447 ORTHO05D005061 4.3e-06 54.3 72 55.6
ECA234G2254 Erigeron canadensis HOM05D001447 ORTHO05D005061 4.3e-06 54.3 73 50.7
Lalb_Chr18g0059221 Lupinus albus HOM05D001447 ORTHO05D005061 5.6e-06 53.9 69 56.5
BcaC06g30582 Brassica carinata HOM05D001447 ORTHO05D005061 7.4e-06 53.5 71 54.9
Medtr2g015390 Medicago truncatula HOM05D001447 ORTHO05D005061 7.4e-06 53.5 68 51.5
EL10Ac8g20486 Beta vulgaris HOM05D001447 ORTHO05D005061 9.6e-06 53.1 72 47.2


User provided reference genes

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