Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c47417 Carica papaya HOM05D004692 ORTHO05D117256 5.1e-47 190.7 92 100.0
PGR083G2684 Punica granatum HOM05D004692 ORTHO05D006291 2.8e-08 62.0 31 90.3
MD06G1207500 Malus domestica HOM05D004692 ORTHO05D006291 3.6e-08 61.6 31 83.9
QL10p021731 Quercus lobata HOM05D004692 ORTHO05D006291 3.6e-08 61.6 29 93.1
QL10p021836 Quercus lobata HOM05D004692 ORTHO05D006291 4.7e-08 61.2 29 89.7
CDE07G1308 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 1.4e-07 59.7 52 57.7
DCAR_015116 Daucus carota HOM05D004692 ORTHO05D006291 1.4e-07 59.7 29 89.7
Cc04_g07930 Coffea canephora HOM05D004692 ORTHO05D006291 1.8e-07 59.3 29 89.7
Hma1.2p1_0744F.1_g211680 Hydrangea macrophylla HOM05D004692 ORTHO05D006291 2.3e-07 58.9 29 89.7
Manes.01G023900 Manihot esculenta HOM05D004692 ORTHO05D006291 2.3e-07 58.9 29 89.7
Hund09942 Selenicereus undatus HOM05D004692 ORTHO05D006291 2.3e-07 58.9 33 81.8
Atru.chr9.678 Acer truncatum HOM05D004692 ORTHO05D006291 3.0e-07 58.5 31 83.9
CiPaw.15G118000 Carya illinoinensis HOM05D004692 ORTHO05D006291 3.0e-07 58.5 28 92.9
HanXRQChr16g0501991 Helianthus annuus HOM05D004692 ORTHO05D006291 4.0e-07 58.2 30 86.7
Hund09975 Selenicereus undatus HOM05D004692 ORTHO05D006291 4.0e-07 58.2 27 96.3
TWI81G0688 Tripterygium wilfordii HOM05D004692 ORTHO05D006291 4.0e-07 58.2 29 82.8
Sed0023319 Sechium edule HOM05D004692 ORTHO05D006291 5.2e-07 57.8 33 75.8
MSTRG.22946 Avicennia marina HOM05D004692 ORTHO05D006291 6.8e-07 57.4 29 82.8
DCAR_015115 Daucus carota HOM05D004692 ORTHO05D006291 6.8e-07 57.4 29 86.2
Lsat_1_v5_gn_4_112840 Lactuca sativa HOM05D004692 ORTHO05D006291 6.8e-07 57.4 29 86.2
Prupe.5G211900 Prunus persica HOM05D004692 ORTHO05D006291 6.8e-07 57.4 31 83.9
CsaV3_1G003170 Cucumis sativus L. HOM05D004692 ORTHO05D006291 8.9e-07 57.0 31 83.9
Peaxi162Scf00119g00017 Petunia axillaris HOM05D004692 ORTHO05D006291 8.9e-07 57.0 29 86.2
SalBow5G2075 Salvia bowleyana HOM05D004692 ORTHO05D006291 8.9e-07 57.0 29 86.2
Sc12g0006960 Simmondsia chinensis HOM05D004692 ORTHO05D006291 8.9e-07 57.0 32 78.1
Thecc.03G112800 Theobroma cacao HOM05D004692 ORTHO05D006291 8.9e-07 57.0 27 92.6
MELO3C017264.2 Cucumis melo HOM05D004692 ORTHO05D006291 1.2e-06 56.6 31 80.6
Migut.J01255 Erythranthe guttata HOM05D004692 ORTHO05D006291 1.2e-06 56.6 29 75.9
Eucgr.B00659 Eucalyptus grandis HOM05D004692 ORTHO05D006291 1.2e-06 56.6 27 92.6
CSS0001909 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.5e-06 56.2 28 85.7
CSS0041638 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.5e-06 56.2 28 85.7
Cfa019856 Carpinus fangiana HOM05D004692 ORTHO05D006291 1.5e-06 56.2 28 89.3
CDE06G1750 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 1.5e-06 56.2 29 79.3
Ciclev10020592m.g Citrus clementina HOM05D004692 ORTHO05D006291 1.5e-06 56.2 32 78.1
ECA232G0381 Erigeron canadensis HOM05D004692 ORTHO05D006291 1.5e-06 56.2 29 86.2
HanXRQChr16g0501981 Helianthus annuus HOM05D004692 ORTHO05D006291 1.5e-06 56.2 29 86.2
MD14G1218000 Malus domestica HOM05D004692 ORTHO05D006291 1.5e-06 56.2 31 77.4
FAN13G2141 Fragaria x ananassa HOM05D004692 ORTHO05D006291 2.0e-06 55.8 29 82.8
Nitab4.5_0000208g0050 Nicotiana tabacum HOM05D004692 ORTHO05D006291 2.0e-06 55.8 29 86.2
FvH4_5g13050 Fragaria vesca HOM05D004692 ORTHO05D006291 2.6e-06 55.5 29 82.8
FAN18G3467 Fragaria x ananassa HOM05D004692 ORTHO05D006291 2.6e-06 55.5 29 82.8
Oeu058039.1 Olea europaea HOM05D004692 ORTHO05D006291 2.6e-06 55.5 27 85.2
Ah.11g047310 Amaranthus hybridus HOM05D004692 ORTHO05D006291 3.4e-06 55.1 28 85.7
CANSAT80G0730 Cannabis sativa HOM05D004692 ORTHO05D006291 3.4e-06 55.1 29 82.8
Rhsim08G0150000 Rhododendron simsii HOM05D004692 ORTHO05D006291 3.4e-06 55.1 27 85.2
vmacro17655 Vaccinium macrocarpon HOM05D004692 ORTHO05D006291 3.4e-06 55.1 27 85.2
VMungo1215G1525 Vigna mungo HOM05D004692 ORTHO05D006291 3.4e-06 55.1 28 82.1
ATR0691G179 Amborella trichopoda HOM05D004692 ORTHO05D006291 4.4e-06 54.7 30 76.7
C03p04140 Brassica napus HOM05D004692 ORTHO05D006291 4.4e-06 54.7 34 76.5
Potri.015G055300 Populus trichocarpa HOM05D004692 ORTHO05D006291 4.4e-06 54.7 27 88.9
Sabra15G0080100 Salix brachista HOM05D004692 ORTHO05D006291 4.4e-06 54.7 27 88.9
Aqoxy3G00609 Aquilegia oxysepala HOM05D004692 ORTHO05D006291 5.7e-06 54.3 29 75.9
ClCG06G015290 Citrullus lanatus HOM05D004692 ORTHO05D006291 5.7e-06 54.3 27 85.2
Dinv36841 Davidia involucrata HOM05D004692 ORTHO05D006291 5.7e-06 54.3 27 88.9
Nitab4.5_0007617g0010 Nicotiana tabacum HOM05D004692 ORTHO05D006291 5.7e-06 54.3 29 82.8
EL10Ac5g11213 Beta vulgaris HOM05D004692 ORTHO05D006291 7.5e-06 53.9 28 78.6
Duzib205G0043 Durio zibethinus HOM05D004692 ORTHO05D006291 7.5e-06 53.9 28 82.1
Gohir.A07G057600 Gossypium hirsutum HOM05D004692 ORTHO05D006291 7.5e-06 53.9 28 85.7
THA.LOC104819389 Tarenaya hassleriana HOM05D004692 ORTHO05D006291 7.5e-06 53.9 28 85.7
Actinidia01418 Actinidia chinensis HOM05D004692 ORTHO05D006291 9.8e-06 53.5 28 82.1
Actinidia10430 Actinidia chinensis HOM05D004692 ORTHO05D006291 9.8e-06 53.5 28 82.1
Ah.02g120970 Amaranthus hybridus HOM05D004692 ORTHO05D006291 9.8e-06 53.5 28 82.1
BraA10t44898Z Brassica rapa HOM05D004692 ORTHO05D006291 9.8e-06 53.5 30 83.3
AUR62036914 Chenopodium quinoa HOM05D004692 ORTHO05D006291 9.8e-06 53.5 27 85.2
Glyma.17G083400 Glycine max HOM05D004692 ORTHO05D006291 9.8e-06 53.5 28 85.7
Gohir.D07G062400 Gossypium hirsutum HOM05D004692 ORTHO05D006291 9.8e-06 53.5 28 85.7
Gorai.001G065900 Gossypium raimondii HOM05D004692 ORTHO05D006291 9.8e-06 53.5 28 85.7
Lj4g0008523 Lotus japonicus HOM05D004692 ORTHO05D006291 9.8e-06 53.5 28 85.7


User provided reference genes

Program Settings