Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c47404 Carica papaya HOM05D000198 ORTHO05D043550 3.8e-19 97.1 45 100.0
Potri.001G167100 Populus trichocarpa HOM05D000198 ORTHO05D005959 8.2e-14 79.3 45 80.0
Dinv37857 Davidia involucrata HOM05D000198 ORTHO05D005959 1.1e-13 79.0 45 82.2
Potri.003G067700 Populus trichocarpa HOM05D000198 ORTHO05D005959 1.1e-13 79.0 45 80.0
Sabra01G0126300 Salix brachista HOM05D000198 ORTHO05D005959 1.1e-13 79.0 45 82.2
COL.COLO4_30736 Corchorus olitorius HOM05D000198 ORTHO05D005959 3.1e-13 77.4 45 77.8
Thhalv10011405m.g Eutrema salsugineum HOM05D000198 ORTHO05D005959 3.1e-13 77.4 45 80.0
Dinv20419 Davidia involucrata HOM05D000198 ORTHO05D005959 4.1e-13 77.0 45 80.0
Gohir.A06G144000 Gossypium hirsutum HOM05D000198 ORTHO05D005959 4.1e-13 77.0 45 77.8
TWI14G1137 Tripterygium wilfordii HOM05D000198 ORTHO05D005959 4.1e-13 77.0 45 77.8
Hma1.2p1_0291F.1_g114920 Hydrangea macrophylla HOM05D000198 ORTHO05D005959 5.3e-13 76.6 45 77.8
Duzib192G0568 Durio zibethinus HOM05D000198 ORTHO05D005959 6.9e-13 76.3 45 75.6
Sabra03G0039600 Salix brachista HOM05D000198 ORTHO05D005959 6.9e-13 76.3 45 77.8
Duzib235G0296 Durio zibethinus HOM05D000198 ORTHO05D005959 9.0e-13 75.9 45 73.3
Gohir.D06G149800 Gossypium hirsutum HOM05D000198 ORTHO05D005959 1.5e-12 75.1 45 75.6
Thecc.06G122600 Theobroma cacao HOM05D000198 ORTHO05D005959 1.5e-12 75.1 45 73.3
Actinidia24721 Actinidia chinensis HOM05D000198 ORTHO05D005959 2.6e-12 74.3 45 73.3
Gorai.010G174800 Gossypium raimondii HOM05D000198 ORTHO05D005959 3.4e-12 73.9 45 73.3
Manes.11G018400 Manihot esculenta HOM05D000198 ORTHO05D005959 3.4e-12 73.9 45 73.3
Oeu057874.2 Olea europaea HOM05D000198 ORTHO05D005959 3.4e-12 73.9 45 73.3
vmacro22030 Vaccinium macrocarpon HOM05D000198 ORTHO05D005959 3.4e-12 73.9 45 73.3
MSTRG.9524 Avicennia marina HOM05D000198 ORTHO05D005959 4.5e-12 73.6 45 71.1
SGA_v2.0_scaffold71G23880 Striga asiatica HOM05D000198 ORTHO05D005959 4.5e-12 73.6 45 73.3
Manes.04G146300 Manihot esculenta HOM05D000198 ORTHO05D005959 5.8e-12 73.2 45 75.6
PGR119G2520 Punica granatum HOM05D000198 ORTHO05D005959 7.6e-12 72.8 45 71.1
Sp1g40550 Schrenkiella parvula HOM05D000198 ORTHO05D005959 7.6e-12 72.8 45 73.3
Peaxi162Scf00038g02031 Petunia axillaris HOM05D000198 ORTHO05D005959 1.0e-11 72.4 45 68.9
Rhsim12G0210700 Rhododendron simsii HOM05D000198 ORTHO05D005959 1.3e-11 72.0 45 68.9
THA.LOC104815620 Tarenaya hassleriana HOM05D000198 ORTHO05D005959 1.3e-11 72.0 45 73.3
Aa31LG8G1290 Aethionema arabicum HOM05D000198 ORTHO05D005959 1.7e-11 71.6 45 68.9
AUR62001464 Chenopodium quinoa HOM05D000198 ORTHO05D005959 1.7e-11 71.6 45 68.9
AUR62009904 Chenopodium quinoa HOM05D000198 ORTHO05D005959 1.7e-11 71.6 45 68.9
MELO3C024345.2 Cucumis melo HOM05D000198 ORTHO05D005959 1.7e-11 71.6 41 80.5
CsaV3_7G034360 Cucumis sativus L. HOM05D000198 ORTHO05D005959 1.7e-11 71.6 41 80.5
Atru.chr1.4039 Acer truncatum HOM05D000198 ORTHO05D005959 2.2e-11 71.2 45 75.6
Nn8g38614 Nelumbo nucifera HOM05D000198 ORTHO05D005959 2.2e-11 71.2 45 71.1
Rhsim12G0211100 Rhododendron simsii HOM05D000198 ORTHO05D005959 2.2e-11 71.2 45 68.9
BcaB04g17029 Brassica carinata HOM05D000198 ORTHO05D005959 2.9e-11 70.9 45 71.1
Nitab4.5_0002898g0050 Nicotiana tabacum HOM05D000198 ORTHO05D005959 2.9e-11 70.9 45 68.9
Nitab4.5_0005225g0020 Nicotiana tabacum HOM05D000198 ORTHO05D005959 2.9e-11 70.9 45 68.9
CSS0046920 Camellia sinensis var. sinensis HOM05D000198 ORTHO05D005959 3.8e-11 70.5 45 68.9
DCAR_022687 Daucus carota HOM05D000198 ORTHO05D005959 3.8e-11 70.5 45 68.9
AT1G54100 Arabidopsis thaliana HOM05D000198 ORTHO05D005959 5.0e-11 70.1 45 71.1
Cc00_g19070 Coffea canephora HOM05D000198 ORTHO05D005959 6.5e-11 69.7 45 68.9
SalBow6G2826 Salvia bowleyana HOM05D000198 ORTHO05D005959 6.5e-11 69.7 45 68.9
Migut.D00933 Erythranthe guttata HOM05D000198 ORTHO05D005959 8.4e-11 69.3 45 68.9
Migut.I01090 Erythranthe guttata HOM05D000198 ORTHO05D005959 8.4e-11 69.3 45 66.7
Eucgr.F04402 Eucalyptus grandis HOM05D000198 ORTHO05D005959 8.4e-11 69.3 45 68.9
Cfa002976 Carpinus fangiana HOM05D000198 ORTHO05D005959 1.1e-10 68.9 45 68.9
Ciclev10025411m.g Citrus clementina HOM05D000198 ORTHO05D005959 1.1e-10 68.9 45 68.9
TAR667G0005 Trochodendron aralioides HOM05D000198 ORTHO05D005959 1.1e-10 68.9 45 68.9
AL1G62810 Arabidopsis lyrata HOM05D000198 ORTHO05D005959 1.4e-10 68.6 45 68.9
PGSC0003DMG400022885 Solanum tuberosum HOM05D000198 ORTHO05D005959 1.4e-10 68.6 44 65.9
Lj5C35T2 Lonicera japonica HOM05D000198 ORTHO05D005959 1.9e-10 68.2 45 68.9
CDE11G0781 Ceratophyllum demersum HOM05D000198 ORTHO05D005959 2.5e-10 67.8 45 64.4
Sopen03g041040 Solanum pennellii HOM05D000198 ORTHO05D005959 2.5e-10 67.8 44 63.6
A08p01230 Brassica napus HOM05D000198 ORTHO05D005959 3.2e-10 67.4 46 71.7
BraA08t32174Z Brassica rapa HOM05D000198 ORTHO05D005959 3.2e-10 67.4 46 71.7
Carub.0001s4334 Capsella rubella HOM05D000198 ORTHO05D005959 3.2e-10 67.4 41 73.2
CAN.G862.50 Capsicum annuum HOM05D000198 ORTHO05D005959 3.2e-10 67.4 45 62.2
C03p91970 Brassica napus HOM05D000198 ORTHO05D005959 4.2e-10 67.0 46 69.6
BolC3t21517H Brassica oleracea HOM05D000198 ORTHO05D005959 4.2e-10 67.0 46 69.6
Haze_26026 Corylus avellana HOM05D000198 ORTHO05D005959 4.2e-10 67.0 45 66.7
Aqoxy7G01026 Aquilegia oxysepala HOM05D000198 ORTHO05D005959 7.1e-10 66.2 45 64.4
CANSAT56G2536 Cannabis sativa HOM05D000198 ORTHO05D005959 7.1e-10 66.2 45 64.4
CiPaw.03G204900 Carya illinoinensis HOM05D000198 ORTHO05D005959 7.1e-10 66.2 45 64.4
CDE05G2779 Ceratophyllum demersum HOM05D000198 ORTHO05D005959 7.1e-10 66.2 45 62.2
ATR0598G121 Amborella trichopoda HOM05D000198 ORTHO05D005959 9.3e-10 65.9 44 63.6
CARHR044450 Cardamine hirsuta HOM05D000198 ORTHO05D005959 1.2e-09 65.5 45 66.7
ClCG09G001060 Citrullus lanatus HOM05D000198 ORTHO05D005959 1.2e-09 65.5 40 75.0
PSO104G0161 Papaver somniferum HOM05D000198 ORTHO05D005959 1.2e-09 65.5 45 60.0
PSO421G0556 Papaver somniferum HOM05D000198 ORTHO05D005959 1.2e-09 65.5 45 60.0
Prupe.7G196700 Prunus persica HOM05D000198 ORTHO05D005959 1.2e-09 65.5 45 60.0
Sc12g0010670 Simmondsia chinensis HOM05D000198 ORTHO05D005959 2.1e-09 64.7 40 75.0
BcaC01g01433 Brassica carinata HOM05D000198 ORTHO05D005959 2.7e-09 64.3 46 69.6
GSVIVG01015062001 Vitis vinifera HOM05D000198 ORTHO05D005959 3.5e-09 63.9 45 60.0
QL11p001049 Quercus lobata HOM05D000198 ORTHO05D005959 4.6e-09 63.5 45 62.2
Solyc03g122310.4 Solanum lycopersicum HOM05D000198 ORTHO05D005959 4.6e-09 63.5 44 59.1
unitig_748.g7471 Utricularia gibba HOM05D000198 ORTHO05D005959 4.6e-09 63.5 45 60.0
ECA234G3205 Erigeron canadensis HOM05D000198 ORTHO05D005959 7.9e-09 62.8 40 65.0
Lsat_1_v5_gn_5_136600 Lactuca sativa HOM05D000198 ORTHO05D005959 7.9e-09 62.8 40 67.5
MD02G1094300 Malus domestica HOM05D000198 ORTHO05D005959 1.0e-08 62.4 45 55.6
EL10Ac7g16425 Beta vulgaris HOM05D000198 ORTHO05D005959 1.8e-08 61.6 45 57.8
HPP92_011367 Vanilla planifolia HOM05D000198 ORTHO05D005959 2.3e-08 61.2 43 58.1
Hund18683 Selenicereus undatus HOM05D000198 ORTHO05D005959 3.0e-08 60.8 45 57.8
Sed0020538 Sechium edule HOM05D000198 ORTHO05D005959 3.9e-08 60.5 45 62.2
HanXRQChr12g0360421 Helianthus annuus HOM05D000198 ORTHO05D005959 5.1e-08 60.1 40 65.0
Os09g0440300 Oryza sativa ssp. japonica HOM05D000198 ORTHO05D005959 5.1e-08 60.1 44 59.1
MD15G1219200 Malus domestica HOM05D000198 ORTHO05D005959 6.7e-08 59.7 45 53.3
Ah.08g216940 Amaranthus hybridus HOM05D000198 ORTHO05D005959 1.5e-07 58.5 40 62.5
COL.COLO4_18083 Corchorus olitorius HOM05D000198 ORTHO05D005959 3.3e-07 57.4 45 55.6
Phvul.009G226700 Phaseolus vulgaris HOM05D000198 ORTHO05D005959 4.3e-07 57.0 45 55.6
VMungo1309G2902 Vigna mungo HOM05D000198 ORTHO05D005959 4.3e-07 57.0 45 53.3
Mapoly0118s0026 Marchantia polymorpha HOM05D000198 ORTHO05D005959 9.7e-07 55.8 45 46.7
Glyma.15G178400 Glycine max HOM05D000198 ORTHO05D005959 1.3e-06 55.5 45 55.6
SEGI_07673 Sequoiadendron giganteum HOM05D000198 ORTHO05D005959 1.3e-06 55.5 44 54.5
FvH4_1g08890 Fragaria vesca HOM05D000198 ORTHO05D005959 1.6e-06 55.1 40 55.0
FAN03G0818 Fragaria x ananassa HOM05D000198 ORTHO05D005959 1.6e-06 55.1 40 55.0
FAN19G1784 Fragaria x ananassa HOM05D000198 ORTHO05D005959 1.6e-06 55.1 40 55.0
FAN26G1556 Fragaria x ananassa HOM05D000198 ORTHO05D005959 1.6e-06 55.1 40 55.0
FAN26G2953 Fragaria x ananassa HOM05D000198 ORTHO05D005959 1.6e-06 55.1 40 55.0
FAN28G1454 Fragaria x ananassa HOM05D000198 ORTHO05D005959 1.6e-06 55.1 40 55.0
MBI13_g35420_MAGBIO Magnolia biondii HOM05D000198 ORTHO05D005959 2.2e-06 54.7 41 53.7
arahy.Tifrunner.gnm1.ann1.XD58IC Arachis hypogaea HOM05D000198 ORTHO05D005959 3.7e-06 53.9 45 53.3
Glyma.09G070300 Glycine max HOM05D000198 ORTHO05D005959 3.7e-06 53.9 41 56.1
RcHm_v2.0_Chr2g0095351 Rosa chinensis HOM05D000198 ORTHO05D005959 4.8e-06 53.5 40 52.5
TPR.G39911 Trifolium pratense HOM05D000198 ORTHO05D043550 8.2e-06 52.8 45 51.1


User provided reference genes

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