Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c46709 Carica papaya HOM05D002890 ORTHO05D005855 3.5e-129 464.9 228 100.0
Thecc.06G220400 Theobroma cacao HOM05D002890 ORTHO05D005855 9.1e-61 237.7 232 56.5
Duzib192G0355 Durio zibethinus HOM05D002890 ORTHO05D005855 2.2e-59 233.0 231 54.1
Manes.17G038900 Manihot esculenta HOM05D002890 ORTHO05D005855 2.7e-57 226.1 234 53.4
Atru.chr10.2227 Acer truncatum HOM05D002890 ORTHO05D005855 3.0e-56 222.6 231 55.8
Gohir.D10G012400 Gossypium hirsutum HOM05D002890 ORTHO05D005855 8.8e-56 221.1 231 54.5
Gorai.011G014000 Gossypium raimondii HOM05D002890 ORTHO05D005855 2.6e-55 219.5 231 54.5
Haze_06800 Corylus avellana HOM05D002890 ORTHO05D005855 1.3e-54 217.2 234 53.0
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 1.7e-54 216.9 234 53.4
Gohir.A10G012660 Gossypium hirsutum HOM05D002890 ORTHO05D005855 1.7e-54 216.9 231 53.7
QL03p063516 Quercus lobata HOM05D002890 ORTHO05D005855 1.7e-54 216.9 236 54.2
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 4.8e-54 215.3 237 53.2
QL03p063938 Quercus lobata HOM05D002890 ORTHO05D005855 4.8e-54 215.3 236 53.8
Dinv13894 Davidia involucrata HOM05D002890 ORTHO05D005855 6.3e-54 214.9 237 52.3
TWI38G1984 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 1.1e-53 214.2 229 52.4
Potri.011G003500 Populus trichocarpa HOM05D002890 ORTHO05D005855 1.4e-53 213.8 234 53.4
TWI38G1729 Tripterygium wilfordii HOM05D002890 ORTHO05D005855 2.6e-52 209.5 233 51.5
Ciclev10010907m.g Citrus clementina HOM05D002890 ORTHO05D005855 5.9e-52 208.4 235 53.2
TAR629G0274 Trochodendron aralioides HOM05D002890 ORTHO05D005855 3.8e-51 205.7 240 50.4
CiPaw.09G092000 Carya illinoinensis HOM05D002890 ORTHO05D005855 1.5e-50 203.8 236 50.0
CANSAT56G4108 Cannabis sativa HOM05D002890 ORTHO05D005855 5.5e-50 201.8 231 51.1
Sabra11G0001700 Salix brachista HOM05D002890 ORTHO05D005855 5.5e-50 201.8 230 50.9
TAR381G0565 Trochodendron aralioides HOM05D002890 ORTHO05D005855 1.6e-49 200.3 234 50.4
COL.COLO4_31775 Corchorus olitorius HOM05D002890 ORTHO05D005855 3.6e-49 199.1 229 50.2
CANSAT64G2516 Cannabis sativa HOM05D002890 ORTHO05D005855 4.7e-49 198.7 231 50.6
CiPaw.10G071100 Carya illinoinensis HOM05D002890 ORTHO05D005855 6.1e-49 198.4 235 50.2
Nn4g25681 Nelumbo nucifera HOM05D002890 ORTHO05D005855 1.4e-48 197.2 236 50.0
Actinidia36598 Actinidia chinensis HOM05D002890 ORTHO05D005855 1.8e-45 186.8 236 47.5
Sopen06g028640 Solanum pennellii HOM05D002890 ORTHO05D005855 5.4e-45 185.3 229 47.2
GSVIVG01012724001 Vitis vinifera HOM05D002890 ORTHO05D005855 7.7e-44 181.4 232 46.1
Nitab4.5_0022153g0010 Nicotiana tabacum HOM05D002890 ORTHO05D005855 2.2e-43 179.9 233 47.6
CAN.G65.76 Capsicum annuum HOM05D002890 ORTHO05D005855 5.5e-42 175.3 228 45.6
arahy.Tifrunner.gnm1.ann1.1MU60G Arachis hypogaea HOM05D002890 ORTHO05D005855 9.4e-42 174.5 235 45.5
arahy.Tifrunner.gnm1.ann1.3SKL4U Arachis hypogaea HOM05D002890 ORTHO05D005855 9.4e-42 174.5 231 45.0
Solyc06g072270.4 Solanum lycopersicum HOM05D002890 ORTHO05D005855 9.4e-42 174.5 229 46.7
MD10G1321400 Malus domestica HOM05D002890 ORTHO05D005855 4.7e-41 172.2 235 47.7
MSTRG.23208 Avicennia marina HOM05D002890 ORTHO05D005855 6.1e-41 171.8 236 44.5
Sed0017963 Sechium edule HOM05D002890 ORTHO05D005855 6.1e-41 171.8 232 47.8
CsaV3_3G002680 Cucumis sativus L. HOM05D002890 ORTHO05D005855 8.0e-41 171.4 235 47.7
ClCG10G002660 Citrullus lanatus HOM05D002890 ORTHO05D005855 1.4e-40 170.6 233 45.9
FAN25G2328 Fragaria x ananassa HOM05D002890 ORTHO05D005855 3.0e-40 169.5 232 46.6
MELO3C013937.2 Cucumis melo HOM05D002890 ORTHO05D005855 4.0e-40 169.1 233 45.5
Aqoxy1G00468 Aquilegia oxysepala HOM05D002890 ORTHO05D005855 5.2e-40 168.7 233 42.5
Eucgr.E04054 Eucalyptus grandis HOM05D002890 ORTHO05D005855 6.8e-40 168.3 235 45.5
FvH4_3g02070 Fragaria vesca HOM05D002890 ORTHO05D005855 8.8e-40 167.9 232 45.7
FAN21G0074 Fragaria x ananassa HOM05D002890 ORTHO05D005855 2.6e-39 166.4 232 45.3
Rhsim06G0075600 Rhododendron simsii HOM05D002890 ORTHO05D005855 2.6e-39 166.4 236 43.2
Phvul.006G149850 Phaseolus vulgaris HOM05D002890 ORTHO05D005855 9.8e-39 164.5 240 46.2
Prupe.4G020900 Prunus persica HOM05D002890 ORTHO05D005855 1.3e-38 164.1 236 47.0
Glyma.13G204900 Glycine max HOM05D002890 ORTHO05D005855 1.7e-38 163.7 232 44.0
Glyma.15G107800 Glycine max HOM05D002890 ORTHO05D005855 2.2e-38 163.3 233 44.2
RcHm_v2.0_Chr5g0002971 Rosa chinensis HOM05D002890 ORTHO05D005855 6.3e-38 161.8 231 45.0
VMungo0540G2163 Vigna mungo HOM05D002890 ORTHO05D005855 8.3e-38 161.4 232 44.0
QL05p073153 Quercus lobata HOM05D002890 ORTHO05D005855 1.4e-37 160.6 210 47.1
Lalb_Chr20g0118631 Lupinus albus HOM05D002890 ORTHO05D005855 1.8e-37 160.2 232 42.7
Cc09_g01670 Coffea canephora HOM05D002890 ORTHO05D005855 2.4e-37 159.8 143 58.7
VMungo1309G2953 Vigna mungo HOM05D002890 ORTHO05D005855 4.1e-37 159.1 232 44.0
MBI15_g03194_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D005855 2.0e-36 156.8 226 46.0
RcHm_v2.0_Chr5g0003091 Rosa chinensis HOM05D002890 ORTHO05D005855 2.7e-36 156.4 225 43.6
Psat3g207880 Pisum sativum HOM05D002890 ORTHO05D005855 4.5e-36 155.6 229 41.0
RcHm_v2.0_Chr5g0003031 Rosa chinensis HOM05D002890 ORTHO05D005855 4.5e-36 155.6 225 43.6
CDE05G0302 Ceratophyllum demersum HOM05D002890 ORTHO05D005855 7.7e-36 154.8 227 42.7
DCAR_028200 Daucus carota HOM05D002890 ORTHO05D005855 1.0e-35 154.5 235 46.0
Ca_00660_v3 Cicer arietinum L. HOM05D002890 ORTHO05D005855 8.6e-35 151.4 229 41.0
MD05G1346800 Malus domestica HOM05D002890 ORTHO05D005855 8.6e-35 151.4 237 44.3
vmacro21934 Vaccinium macrocarpon HOM05D002890 ORTHO05D005855 1.1e-34 151.0 235 41.7
Peaxi162Scf00643g00544 Petunia axillaris HOM05D002890 ORTHO05D005855 1.9e-34 150.2 235 41.3
HanXRQChr15g0470641 Helianthus annuus HOM05D002890 ORTHO05D005855 1.6e-33 147.1 228 40.4
Oeu039345.1 Olea europaea HOM05D002890 ORTHO05D005855 1.6e-33 147.1 233 41.2
unitig_749.g13717 Utricularia gibba HOM05D002890 ORTHO05D005855 3.6e-33 146.0 235 40.0
Migut.O00260 Erythranthe guttata HOM05D002890 ORTHO05D005855 4.0e-32 142.5 228 38.6
Lsat_1_v5_gn_7_16040 Lactuca sativa HOM05D002890 ORTHO05D005855 5.2e-32 142.1 228 39.9
THA.LOC104812970 Tarenaya hassleriana HOM05D002890 ORTHO05D005855 8.9e-32 141.4 136 58.1
PSO478G2895 Papaver somniferum HOM05D002890 ORTHO05D005855 1.2e-31 141.0 179 48.0
ECA236G1013 Erigeron canadensis HOM05D002890 ORTHO05D005855 2.0e-31 140.2 228 42.1
Medtr2g023280 Medicago truncatula HOM05D002890 ORTHO05D005855 2.6e-31 139.8 230 41.3
Nitab4.5_0002954g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 2.6e-31 139.8 159 50.9
SalBow5G1338 Salvia bowleyana HOM05D002890 ORTHO05D005855 3.4e-31 139.4 237 39.7
Ah.06g183850 Amaranthus hybridus HOM05D002890 ORTHO05D005855 5.7e-31 138.7 140 54.3
Lj1g0005233 Lotus japonicus HOM05D002890 ORTHO05D005855 5.7e-31 138.7 230 40.4
Hund21410 Selenicereus undatus HOM05D002890 ORTHO05D005855 5.7e-31 138.7 145 52.4
AUR62029351 Chenopodium quinoa HOM05D002890 ORTHO05D005855 7.5e-31 138.3 143 54.5
Lj6g0006472 Lotus japonicus HOM05D002890 ORTHO05D005855 7.5e-31 138.3 230 40.4
EL10Ac4g08116 Beta vulgaris HOM05D002890 ORTHO05D005855 1.3e-30 137.5 230 41.3
PSO017G2731 Papaver somniferum HOM05D002890 ORTHO05D005855 1.3e-30 137.5 179 46.9
TPR.G9950 Trifolium pratense HOM05D002890 ORTHO05D005855 2.9e-30 136.3 223 40.4
Sc17g0007380 Simmondsia chinensis HOM05D002890 ORTHO05D005855 3.7e-30 136.0 300 35.3
AUR62034232 Chenopodium quinoa HOM05D002890 ORTHO05D005855 4.9e-30 135.6 143 53.8
ATR0580G054 Amborella trichopoda HOM05D002890 ORTHO05D005855 1.8e-29 133.7 243 39.5
PGR042G1125 Punica granatum HOM05D002890 ORTHO05D005855 3.2e-29 132.9 239 39.7
Zm00001eb310710 Zea mays HOM05D002890 ORTHO05D005855 1.3e-27 127.5 142 48.6
Aa31LG2G1570 Aethionema arabicum HOM05D002890 ORTHO05D005855 3.3e-26 122.9 137 55.5
SMO364G0505 Selaginella moellendorffii HOM05D002890 ORTHO05D005855 1.2e-25 120.9 154 44.8
HPP92_025078 Vanilla planifolia HOM05D002890 ORTHO05D005855 2.1e-25 120.2 140 49.3
Thhalv10023221m.g Eutrema salsugineum HOM05D002890 ORTHO05D005855 3.6e-25 119.4 139 54.0
AT1G64570 Arabidopsis thaliana HOM05D002890 ORTHO05D005855 8.0e-25 118.2 136 53.7
CSS0042685 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D005855 8.0e-25 118.2 108 58.3
SEGI_27437 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 8.0e-25 118.2 257 33.5
AagrBONN_evm.TU.Sc2ySwM_228.3189 Anthoceros agrestis HOM05D002890 ORTHO05D005855 1.0e-24 117.9 244 36.1
Sp2g00190 Schrenkiella parvula HOM05D002890 ORTHO05D005855 3.1e-24 116.3 138 53.6
Nitab4.5_0001247g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 5.2e-24 115.5 203 39.4
Carub.0002s0019 Capsella rubella HOM05D002890 ORTHO05D005855 1.5e-23 114.0 136 52.9
AL2G10210 Arabidopsis lyrata HOM05D002890 ORTHO05D005855 2.0e-23 113.6 136 52.9
BraA09t37106Z Brassica rapa HOM05D002890 ORTHO05D005855 7.5e-23 111.7 136 50.0
A09p14580 Brassica napus HOM05D002890 ORTHO05D005855 9.8e-23 111.3 136 50.0
C09p17660 Brassica napus HOM05D002890 ORTHO05D005855 4.9e-22 109.0 129 53.5
BolC9t54660H Brassica oleracea HOM05D002890 ORTHO05D005855 4.9e-22 109.0 129 53.5
SHI02202 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-22 109.0 238 37.4
BcaC04g22581 Brassica carinata HOM05D002890 ORTHO05D007906 6.4e-22 108.6 122 54.1
Mapoly0029s0108 Marchantia polymorpha HOM05D002890 ORTHO05D005855 1.9e-21 107.1 192 38.5
Nitab4.5_0001678g0050 Nicotiana tabacum HOM05D002890 ORTHO05D005855 4.1e-21 105.9 114 52.6
HPP92_025073 Vanilla planifolia HOM05D002890 ORTHO05D005855 9.2e-21 104.8 141 45.4
CARHR046380 Cardamine hirsuta HOM05D002890 ORTHO05D005855 1.2e-20 104.4 136 49.3
Nitab4.5_0000033g0410 Nicotiana tabacum HOM05D002890 ORTHO05D005855 2.3e-19 100.1 114 50.0
Pp3c26_140 Physcomitrium patens HOM05D002890 ORTHO05D005855 2.3e-19 100.1 263 34.6
Lj1P1230T41 Lonicera japonica HOM05D002890 ORTHO05D005855 6.0e-12 75.5 126 38.1
SEGI_20102 Sequoiadendron giganteum HOM05D002890 ORTHO05D005855 2.3e-08 63.5 66 48.5
BcaC01g05870 Brassica carinata HOM05D002890 ORTHO05D005855 1.3e-06 57.8 115 33.9
C03p21570 Brassica napus HOM05D002890 ORTHO05D005855 4.9e-06 55.8 115 33.0
BolC3t14541H Brassica oleracea HOM05D002890 ORTHO05D005855 4.9e-06 55.8 115 33.0


User provided reference genes

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