Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 7.4e-17 89.4 42 100.0
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 2.7e-11 70.9 42 76.2
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 7.9e-11 69.3 39 76.9
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 7.9e-11 69.3 39 76.9
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 1.0e-10 68.9 42 71.4
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.3e-10 68.6 42 73.8
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 3.0e-10 67.4 42 71.4
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 3.9e-10 67.0 39 74.4
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 5.1e-10 66.6 42 64.3
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 5.1e-10 66.6 42 69.0
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 6.7e-10 66.2 39 74.4
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 1.1e-09 65.5 42 71.4
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 1.1e-09 65.5 39 74.4
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.9e-09 64.7 39 66.7
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 2.5e-09 64.3 42 71.4
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 2.5e-09 64.3 39 71.8
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 3.3e-09 63.9 39 71.8
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 4.3e-09 63.5 39 71.8
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 4.3e-09 63.5 42 69.0
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 4.3e-09 63.5 39 69.2
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 5.6e-09 63.2 42 66.7
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 5.6e-09 63.2 39 69.2
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 7.4e-09 62.8 42 69.0
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 7.4e-09 62.8 39 71.8
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 9.6e-09 62.4 39 64.1
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 9.6e-09 62.4 38 68.4
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 1.3e-08 62.0 38 71.1
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 1.6e-08 61.6 39 69.2
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 1.6e-08 61.6 39 66.7
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 1.6e-08 61.6 39 64.1
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 2.1e-08 61.2 39 66.7
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 2.1e-08 61.2 39 66.7
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 2.1e-08 61.2 38 71.1
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 2.1e-08 61.2 38 68.4
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 2.1e-08 61.2 39 69.2
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 2.8e-08 60.8 39 66.7
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 2.8e-08 60.8 40 62.5
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 3.7e-08 60.5 42 59.5
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 3.7e-08 60.5 39 66.7
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 3.7e-08 60.5 38 65.8
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 4.8e-08 60.1 42 57.1
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 6.2e-08 59.7 42 57.1
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 6.2e-08 59.7 42 57.1
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 6.2e-08 59.7 42 57.1
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 6.2e-08 59.7 42 57.1
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 6.2e-08 59.7 38 68.4
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 6.2e-08 59.7 40 60.0
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 8.2e-08 59.3 42 57.1
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 8.2e-08 59.3 42 57.1
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 8.2e-08 59.3 42 57.1
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 8.2e-08 59.3 42 57.1
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 8.2e-08 59.3 42 57.1
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 8.2e-08 59.3 42 57.1
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 8.2e-08 59.3 42 61.9
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 8.2e-08 59.3 42 61.9
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 8.2e-08 59.3 40 57.5
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 8.2e-08 59.3 40 57.5
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 8.2e-08 59.3 39 69.2
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 8.2e-08 59.3 38 68.4
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 1.1e-07 58.9 38 68.4
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 1.1e-07 58.9 38 63.2
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 1.4e-07 58.5 41 63.4
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 1.4e-07 58.5 42 59.5
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 1.4e-07 58.5 40 57.5
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 1.8e-07 58.2 36 66.7
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 1.8e-07 58.2 42 57.1
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 1.8e-07 58.2 40 57.5
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 1.8e-07 58.2 40 57.5
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.8e-07 58.2 36 72.2
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 2.4e-07 57.8 40 55.0
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 3.1e-07 57.4 39 66.7
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 3.1e-07 57.4 39 64.1
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 5.3e-07 56.6 40 57.5
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 6.9e-07 56.2 41 58.5
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 6.9e-07 56.2 41 58.5
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 1.2e-06 55.5 38 63.2
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 1.2e-06 55.5 42 52.4
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 1.5e-06 55.1 42 52.4
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 1.5e-06 55.1 39 53.8
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 2.0e-06 54.7 39 61.5
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 3.4e-06 53.9 39 59.0
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 3.4e-06 53.9 39 59.0
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 7.6e-06 52.8 39 56.4
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 1.0e-05 52.4 39 56.4
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 1.0e-05 52.4 39 59.0


User provided reference genes

Program Settings