Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c45843 Carica papaya HOM05D000640 ORTHO05D011181 1.4e-23 112.1 56 100.0
TAR375G1037 Trochodendron aralioides HOM05D000640 ORTHO05D000849 1.1e-12 75.9 56 69.6
Hma1.2p1_1580F.1_g291930 Hydrangea macrophylla HOM05D000640 ORTHO05D000849 1.2e-11 72.4 56 64.3
Thecc.03G148800 Theobroma cacao HOM05D000640 ORTHO05D000849 1.2e-11 72.4 55 63.6
Gohir.A07G043400 Gossypium hirsutum HOM05D000640 ORTHO05D000849 1.6e-11 72.0 55 63.6
Gohir.D07G047800 Gossypium hirsutum HOM05D000640 ORTHO05D000849 1.6e-11 72.0 55 63.6
Gorai.001G051000 Gossypium raimondii HOM05D000640 ORTHO05D000849 1.6e-11 72.0 55 63.6
Actinidia13610 Actinidia chinensis HOM05D000640 ORTHO05D000849 2.8e-11 71.2 53 66.0
GSVIVG01013938001 Vitis vinifera HOM05D000640 ORTHO05D000849 3.6e-11 70.9 56 60.7
CSS0029534 Camellia sinensis var. sinensis HOM05D000640 ORTHO05D000849 4.7e-11 70.5 56 62.5
Dinv06597 Davidia involucrata HOM05D000640 ORTHO05D000849 4.7e-11 70.5 55 63.6
CiPaw.07G185100 Carya illinoinensis HOM05D000640 ORTHO05D000849 1.1e-10 69.3 56 57.1
Thhalv10003971m.g Eutrema salsugineum HOM05D000640 ORTHO05D000849 1.1e-10 69.3 56 60.7
BolC7t45051H Brassica oleracea HOM05D000640 ORTHO05D000849 1.8e-10 68.6 56 60.7
SGA_v2.0_scaffold60G20814 Striga asiatica HOM05D000640 ORTHO05D000849 2.3e-10 68.2 56 64.3
Cc02_g04720 Coffea canephora HOM05D000640 ORTHO05D000849 4.0e-10 67.4 56 58.9
Lj8A47G37 Lonicera japonica HOM05D000640 ORTHO05D000849 4.0e-10 67.4 56 60.7
A03p47180 Brassica napus HOM05D000640 ORTHO05D000849 5.2e-10 67.0 56 58.9
C07p45280 Brassica napus HOM05D000640 ORTHO05D000849 5.2e-10 67.0 56 60.7
BraA03t13846Z Brassica rapa HOM05D000640 ORTHO05D000849 5.2e-10 67.0 56 58.9
Carub.0008s2227 Capsella rubella HOM05D000640 ORTHO05D000849 5.2e-10 67.0 56 58.9
Oeu042531.1 Olea europaea HOM05D000640 ORTHO05D000849 5.2e-10 67.0 55 60.0
TAR375G0574 Trochodendron aralioides HOM05D000640 ORTHO05D011181 5.2e-10 67.0 52 63.5
AL8G38310 Arabidopsis lyrata HOM05D000640 ORTHO05D000849 6.8e-10 66.6 56 58.9
CARHR275370 Cardamine hirsuta HOM05D000640 ORTHO05D000849 6.8e-10 66.6 56 58.9
Sp2g24790 Schrenkiella parvula HOM05D000640 ORTHO05D000849 8.9e-10 66.2 56 58.9
MSTRG.27220 Avicennia marina HOM05D000640 ORTHO05D000849 1.2e-09 65.9 56 58.9
PGR042G2109 Punica granatum HOM05D000640 ORTHO05D000849 1.2e-09 65.9 56 57.1
AT5G61580 Arabidopsis thaliana HOM05D000640 ORTHO05D000849 1.5e-09 65.5 56 57.1
QL09p027964 Quercus lobata HOM05D000640 ORTHO05D000849 1.5e-09 65.5 55 58.2
Nn1g00868 Nelumbo nucifera HOM05D000640 ORTHO05D000849 2.0e-09 65.1 53 60.4
CAN.G247.18 Capsicum annuum HOM05D000640 ORTHO05D000849 2.6e-09 64.7 56 55.4
Peaxi162Scf00271g00616 Petunia axillaris HOM05D000640 ORTHO05D000849 3.4e-09 64.3 53 58.5
COL.COLO4_37340 Corchorus olitorius HOM05D000640 ORTHO05D000849 5.8e-09 63.5 51 56.9
Solyc03g093520.3 Solanum lycopersicum HOM05D000640 ORTHO05D000849 7.5e-09 63.2 53 58.5
Sopen03g024340 Solanum pennellii HOM05D000640 ORTHO05D000849 7.5e-09 63.2 53 58.5
Actinidia31669 Actinidia chinensis HOM05D000640 ORTHO05D000849 1.7e-08 62.0 42 73.8
CANSAT56G3314 Cannabis sativa HOM05D000640 ORTHO05D000849 1.7e-08 62.0 53 58.5
Nitab4.5_0003173g0010 Nicotiana tabacum HOM05D000640 ORTHO05D000849 2.9e-08 61.2 53 56.6
Atru.chr1.917 Acer truncatum HOM05D000640 ORTHO05D000849 3.7e-08 60.8 39 71.8
Ciclev10004702m.g Citrus clementina HOM05D000640 ORTHO05D000849 4.9e-08 60.5 50 64.0
Lalb_Chr02g0150821 Lupinus albus HOM05D000640 ORTHO05D000849 4.9e-08 60.5 56 55.4
Haze_22197 Corylus avellana HOM05D000640 ORTHO05D000849 6.4e-08 60.1 39 76.9
MD01G1177300 Malus domestica HOM05D000640 ORTHO05D000849 1.1e-07 59.3 49 65.3
Prupe.2G272600 Prunus persica HOM05D000640 ORTHO05D000849 1.1e-07 59.3 48 66.7
Aa31LG11G1850 Aethionema arabicum HOM05D000640 ORTHO05D000849 1.9e-07 58.5 40 77.5
vmacro06837 Vaccinium macrocarpon HOM05D000640 ORTHO05D000849 2.4e-07 58.2 49 59.2
Duzib205G1392 Durio zibethinus HOM05D000640 ORTHO05D000849 3.2e-07 57.8 34 79.4
TWI39G0287 Tripterygium wilfordii HOM05D000640 ORTHO05D000849 4.1e-07 57.4 40 72.5
Lj5g0017921 Lotus japonicus HOM05D000640 ORTHO05D011181 7.0e-07 56.6 34 79.4
Cfa013577 Carpinus fangiana HOM05D000640 ORTHO05D000868 9.2e-07 56.2 39 71.8
ECA233G4658 Erigeron canadensis HOM05D000640 ORTHO05D000849 9.2e-07 56.2 33 81.8
RcHm_v2.0_Chr1g0373651 Rosa chinensis HOM05D000640 ORTHO05D000849 9.2e-07 56.2 40 75.0
CsaV3_4G004200 Cucumis sativus L. HOM05D000640 ORTHO05D000849 1.6e-06 55.5 41 65.9
Manes.14G038800 Manihot esculenta HOM05D000640 ORTHO05D000849 1.6e-06 55.5 40 72.5
MELO3C017646.2 Cucumis melo HOM05D000640 ORTHO05D000849 3.5e-06 54.3 41 65.9
Glyma.10G194300 Glycine max HOM05D000640 ORTHO05D000849 4.6e-06 53.9 37 70.3
Migut.F00525 Erythranthe guttata HOM05D000640 ORTHO05D000849 7.8e-06 53.1 37 75.7
Sed0022686 Sechium edule HOM05D000640 ORTHO05D000868 7.8e-06 53.1 48 58.3


User provided reference genes

Program Settings