Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c45377 Carica papaya HOM05D000082 ORTHO05D009107 2.8e-126 455.3 230 100.0
Cpa.g.sc114.28 Carica papaya HOM05D000082 ORTHO05D009107 2.5e-114 415.6 227 95.2
QL07p045866 Quercus lobata HOM05D000082 ORTHO05D009107 1.7e-46 190.3 226 54.4
Cfa017471 Carpinus fangiana HOM05D000082 ORTHO05D009107 2.4e-45 186.4 223 55.2
Haze_20683 Corylus avellana HOM05D000082 ORTHO05D009107 7.0e-45 184.9 226 54.9
Duzib093G0578 Durio zibethinus HOM05D000082 ORTHO05D009107 1.2e-44 184.1 227 54.6
MD12G1130000 Malus domestica HOM05D000082 ORTHO05D009107 1.2e-44 184.1 218 51.8
RcHm_v2.0_Chr3g0468101 Rosa chinensis HOM05D000082 ORTHO05D009107 1.2e-44 184.1 220 49.5
FAN09G0908 Fragaria x ananassa HOM05D000082 ORTHO05D009107 1.0e-43 181.0 223 50.7
MD04G1110800 Malus domestica HOM05D000082 ORTHO05D009107 1.7e-43 180.3 218 51.4
FAN14G0917 Fragaria x ananassa HOM05D000001 ORTHO05D009574 6.6e-43 178.3 220 49.5
Aa31LG1G22140 Aethionema arabicum HOM05D000082 ORTHO05D009107 1.1e-42 177.6 249 47.0
Thecc.05G050400 Theobroma cacao HOM05D000082 ORTHO05D009107 1.9e-42 176.8 227 52.4
FvH4_6g14890 Fragaria vesca HOM05D000082 ORTHO05D009107 5.6e-42 175.3 220 48.6
Thhalv10014308m.g Eutrema salsugineum HOM05D000082 ORTHO05D009107 3.6e-41 172.6 229 48.5
PGR004G2602 Punica granatum HOM05D000082 ORTHO05D009107 6.2e-41 171.8 220 49.5
FAN05G2118 Fragaria x ananassa HOM05D000001 ORTHO05D009574 8.1e-41 171.4 223 48.4
CARHR210630 Cardamine hirsuta HOM05D000082 ORTHO05D009107 3.1e-40 169.5 225 48.0
Potri.016G082500 Populus trichocarpa HOM05D000082 ORTHO05D009107 3.1e-40 169.5 230 48.7
Sp6g39830 Schrenkiella parvula HOM05D000082 ORTHO05D009107 3.1e-40 169.5 227 48.0
Sabra16G0090300 Salix brachista HOM05D000082 ORTHO05D009107 5.2e-40 168.7 217 49.8
BcaNung03277 Brassica carinata HOM05D000082 ORTHO05D009107 6.8e-40 168.3 230 48.3
C09p73930 Brassica napus HOM05D000082 ORTHO05D009107 6.8e-40 168.3 230 48.3
Potri.006G216200 Populus trichocarpa HOM05D000082 ORTHO05D009107 6.8e-40 168.3 222 50.0
AL6G12000 Arabidopsis lyrata HOM05D000082 ORTHO05D009107 1.2e-39 167.5 229 47.6
THA.LOC104816301 Tarenaya hassleriana HOM05D000082 ORTHO05D009107 1.2e-39 167.5 229 48.9
Ciclev10012410m.g Citrus clementina HOM05D000082 ORTHO05D009107 1.5e-39 167.2 223 48.0
Duzib106G0946 Durio zibethinus HOM05D000082 ORTHO05D009107 1.5e-39 167.2 226 51.3
A10p32960 Brassica napus HOM05D000082 ORTHO05D009107 2.0e-39 166.8 231 47.6
BraA10t45333Z Brassica rapa HOM05D000082 ORTHO05D009107 2.0e-39 166.8 231 47.6
Glyma.10G047200 Glycine max HOM05D000082 ORTHO05D009107 2.0e-39 166.8 222 50.9
Phvul.007G161400 Phaseolus vulgaris HOM05D000082 ORTHO05D009107 2.0e-39 166.8 225 49.8
AT5G02750 Arabidopsis thaliana HOM05D000082 ORTHO05D009107 2.6e-39 166.4 229 48.0
Gohir.D04G116900 Gossypium hirsutum HOM05D000082 ORTHO05D009107 2.6e-39 166.4 226 49.6
THA.LOC104826993 Tarenaya hassleriana HOM05D000082 ORTHO05D009107 2.6e-39 166.4 225 49.3
Gohir.A04G077700 Gossypium hirsutum HOM05D000082 ORTHO05D009107 3.4e-39 166.0 226 49.6
Gorai.009G421800 Gossypium raimondii HOM05D000082 ORTHO05D009107 4.4e-39 165.6 226 48.7
Lj5g0019657 Lotus japonicus HOM05D000082 ORTHO05D009107 4.4e-39 165.6 229 50.2
BolC9t60128H Brassica oleracea HOM05D000082 ORTHO05D009107 5.8e-39 165.2 230 47.8
BraA02t04727Z Brassica rapa HOM05D000082 ORTHO05D009107 1.7e-38 163.7 227 46.7
VMungo0720G0005 Vigna mungo HOM05D000082 ORTHO05D009107 1.7e-38 163.7 223 48.9
Manes.09G071600 Manihot esculenta HOM05D000082 ORTHO05D009107 2.2e-38 163.3 204 49.5
BcaC03g13049 Brassica carinata HOM05D000082 ORTHO05D009107 3.7e-38 162.5 227 46.3
RhsimUnG0121000 Rhododendron simsii HOM05D000082 ORTHO05D009107 8.3e-38 161.4 218 49.5
Medtr1g067260 Medicago truncatula HOM05D000082 ORTHO05D009107 1.1e-37 161.0 225 48.0
Lsat_1_v5_gn_6_32220 Lactuca sativa HOM05D000082 ORTHO05D009107 5.4e-37 158.7 229 47.6
Atru.chr8.2511 Acer truncatum HOM05D000082 ORTHO05D009107 7.1e-37 158.3 227 47.1
Lalb_Chr02g0153441 Lupinus albus HOM05D000082 ORTHO05D009107 1.2e-36 157.5 229 47.6
Sed0022305 Sechium edule HOM05D000082 ORTHO05D009107 1.2e-36 157.5 215 49.3
Psat6g069240 Pisum sativum HOM05D000082 ORTHO05D009107 4.6e-36 155.6 231 46.8
C02p00600 Brassica napus HOM05D000082 ORTHO05D009107 7.8e-36 154.8 225 45.3
Glyma.13G135100 Glycine max HOM05D000082 ORTHO05D009107 1.0e-35 154.5 222 48.2
ClCG10G020730 Citrullus lanatus HOM05D000001 ORTHO05D009574 1.3e-35 154.1 220 47.7
MELO3C009295.2 Cucumis melo HOM05D000082 ORTHO05D009107 2.5e-34 149.8 227 45.8
CsaV3_3G035280 Cucumis sativus L. HOM05D000082 ORTHO05D009107 4.3e-34 149.1 227 45.8
MSTRG.10289 Avicennia marina HOM05D000082 ORTHO05D009107 7.3e-34 148.3 223 47.1
HanXRQChr13g0399491 Helianthus annuus HOM05D000082 ORTHO05D009107 9.5e-34 147.9 215 46.0
CiPaw.09G185100 Carya illinoinensis HOM05D000082 ORTHO05D009107 3.6e-33 146.0 222 46.4
DCAR_000454 Daucus carota HOM05D000082 ORTHO05D009107 4.7e-33 145.6 217 47.5
DCAR_014952 Daucus carota HOM05D000082 ORTHO05D009107 4.7e-33 145.6 217 47.5
ECA233G4487 Erigeron canadensis HOM05D000082 ORTHO05D009107 1.4e-32 144.1 212 44.3
Hma1.2p1_0111F.1_g053540 Hydrangea macrophylla HOM05D000082 ORTHO05D009107 1.8e-32 143.7 218 45.9
Nitab4.5_0000643g0220 Nicotiana tabacum HOM05D000082 ORTHO05D009107 1.8e-32 143.7 217 45.6
BcaC06g32010 Brassica carinata HOM05D000082 ORTHO05D009107 2.4e-32 143.3 256 41.0
Dinv37235 Davidia involucrata HOM05D000082 ORTHO05D009107 2.4e-32 143.3 218 47.2
CSS0002434 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D009107 1.5e-31 140.6 215 47.0
TWI53G1873 Tripterygium wilfordii HOM05D000082 ORTHO05D009107 2.0e-31 140.2 230 45.7
Peaxi162Scf00472g00824 Petunia axillaris HOM05D000082 ORTHO05D009107 1.7e-30 137.1 236 44.1
MSTRG.26740 Avicennia marina HOM05D000082 ORTHO05D009107 1.4e-29 134.0 227 46.7
Carub.0006s0151 Capsella rubella HOM05D000082 ORTHO05D009107 1.9e-29 133.7 228 40.4
CANSAT80G2912 Cannabis sativa HOM05D000082 ORTHO05D009107 2.4e-29 133.3 224 42.9
Cc06_g03320 Coffea canephora HOM05D000082 ORTHO05D009107 2.4e-29 133.3 225 45.8
Nitab4.5_0007103g0010 Nicotiana tabacum HOM05D000082 ORTHO05D009107 2.4e-29 133.3 220 44.1
Peaxi162Scf00597g00828 Petunia axillaris HOM05D000082 ORTHO05D009107 3.2e-29 132.9 225 42.2
Migut.L01646 Erythranthe guttata HOM05D000082 ORTHO05D009107 1.3e-27 127.5 227 42.7
Ah.16g101190 Amaranthus hybridus HOM05D000082 ORTHO05D009107 2.3e-27 126.7 219 42.9
Solyc09g007060.2 Solanum lycopersicum HOM05D000082 ORTHO05D009107 2.3e-27 126.7 220 41.4
Lalb_Chr06g0171191 Lupinus albus HOM05D000082 ORTHO05D009107 1.5e-26 124.0 227 40.1
DCAR_017743 Daucus carota HOM05D000082 ORTHO05D009107 4.3e-26 122.5 216 41.7
Sopen09g001920 Solanum pennellii HOM05D000082 ORTHO05D009107 7.3e-26 121.7 219 41.6
unitig_0.g695 Utricularia gibba HOM05D000082 ORTHO05D009107 6.2e-25 118.6 216 42.1
Aqoxy2G01925 Aquilegia oxysepala HOM05D000082 ORTHO05D009107 2.4e-24 116.7 215 39.1
Solyc10g084430.2 Solanum lycopersicum HOM05D000082 ORTHO05D009107 5.3e-24 115.5 229 37.1
Nitab4.5_0000202g0330 Nicotiana tabacum HOM05D000082 ORTHO05D009107 2.0e-23 113.6 167 46.1
PGSC0003DMG400011052 Solanum tuberosum HOM05D000082 ORTHO05D009107 2.6e-23 113.2 186 41.9
Sc20g0004250 Simmondsia chinensis HOM05D000082 ORTHO05D009107 2.9e-22 109.8 218 40.8
Nitab4.5_0015651g0010 Nicotiana tabacum HOM05D000082 ORTHO05D009107 3.8e-22 109.4 218 40.4
PSO339G6187 Papaver somniferum HOM05D000082 ORTHO05D009107 4.9e-22 109.0 231 35.9
COL.COLO4_10305 Corchorus olitorius HOM05D000082 ORTHO05D009107 1.2e-20 104.4 130 50.0
PSO384G2695 Papaver somniferum HOM05D000082 ORTHO05D009107 4.6e-20 102.4 229 35.8
Oeu035161.1 Olea europaea HOM05D000082 ORTHO05D009107 3.9e-19 99.4 138 44.9
TAR623G1037 Trochodendron aralioides HOM05D000082 ORTHO05D009107 7.3e-18 95.1 139 48.9
BcaB05g21873 Brassica carinata HOM05D000082 ORTHO05D009107 4.0e-16 89.4 130 42.3
BcaB05g21877 Brassica carinata HOM05D000082 ORTHO05D009107 4.0e-16 89.4 130 42.3
AUR62025169 Chenopodium quinoa HOM05D000082 ORTHO05D009107 9.9e-15 84.7 136 39.0
AUR62029008 Chenopodium quinoa HOM05D000082 ORTHO05D009107 3.8e-14 82.8 134 38.8
CAN.G867.4 Capsicum annuum HOM05D000082 ORTHO05D009107 3.0e-11 73.2 147 34.7
Sopen10g033870 Solanum pennellii HOM05D000082 ORTHO05D009107 3.9e-11 72.8 146 32.9
Ca_14536_v3 Cicer arietinum L. HOM05D000082 ORTHO05D009107 6.7e-11 72.0 117 41.0
HPP92_013686 Vanilla planifolia HOM05D000082 ORTHO05D009107 1.4e-08 64.3 222 32.4
MBI05_g04040_MAGBIO Magnolia biondii HOM05D000082 ORTHO05D009107 2.4e-08 63.5 227 30.8
CDE02G4454 Ceratophyllum demersum HOM05D003162 ORTHO05D003599 8.4e-06 55.1 224 28.1
TAR623G1174 Trochodendron aralioides HOM05D000082 ORTHO05D009107 8.4e-06 55.1 83 43.4


User provided reference genes

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