Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c45312 Carica papaya HOM05D003461 ORTHO05D004386 2.1e-222 775.4 389 100.0
Atru.chr7.2323 Acer truncatum HOM05D003461 ORTHO05D004386 2.3e-104 383.3 406 53.0
Ciclev10007226m.g Citrus clementina HOM05D003461 ORTHO05D004386 1.2e-100 370.9 406 54.4
Duzib168G0147 Durio zibethinus HOM05D003461 ORTHO05D004386 1.7e-99 367.1 402 52.2
Thecc.09G143900 Theobroma cacao HOM05D003461 ORTHO05D004386 2.4e-98 363.2 404 52.7
COL.COLO4_24068 Corchorus olitorius HOM05D003461 ORTHO05D004386 5.6e-95 352.1 395 50.6
Potri.018G034700 Populus trichocarpa HOM05D003461 ORTHO05D004386 1.4e-93 347.4 401 49.1
CiPaw.07G217500 Carya illinoinensis HOM05D003461 ORTHO05D004386 4.0e-93 345.9 393 51.9
Gohir.A05G010700 Gossypium hirsutum HOM05D003461 ORTHO05D004386 5.8e-92 342.0 405 48.6
QL12p031223 Quercus lobata HOM05D003461 ORTHO05D004386 3.8e-91 339.3 403 50.1
Haze_21625 Corylus avellana HOM05D003461 ORTHO05D004386 4.9e-91 339.0 394 49.7
Gohir.D05G011400 Gossypium hirsutum HOM05D003461 ORTHO05D004386 1.1e-90 337.8 405 48.6
Duzib150G1527 Durio zibethinus HOM05D003461 ORTHO05D004386 1.9e-90 337.0 405 48.6
Cfa013213 Carpinus fangiana HOM05D003461 ORTHO05D004386 1.6e-89 334.0 394 49.0
Gohir.D06G048151 Gossypium hirsutum HOM05D003461 ORTHO05D004386 1.6e-89 334.0 405 49.4
Gorai.009G011800 Gossypium raimondii HOM05D003461 ORTHO05D004386 1.6e-89 334.0 405 47.9
Prupe.1G466400 Prunus persica HOM05D003461 ORTHO05D004386 1.6e-89 334.0 398 50.8
Gorai.010G053900 Gossypium raimondii HOM05D003461 ORTHO05D004386 3.5e-89 332.8 405 49.1
TWI34G1710 Tripterygium wilfordii HOM05D003461 ORTHO05D004386 3.5e-89 332.8 402 48.0
Sabra18G0035500 Salix brachista HOM05D003461 ORTHO05D004386 1.9e-87 327.0 401 47.6
Gohir.A06G048100 Gossypium hirsutum HOM05D003461 ORTHO05D004386 4.8e-86 322.4 404 48.5
RcHm_v2.0_Chr6g0312731 Rosa chinensis HOM05D003461 ORTHO05D004386 1.4e-85 320.9 406 48.3
MD08G1135800 Malus domestica HOM05D003461 ORTHO05D004386 1.8e-85 320.5 405 47.9
AL4G17260 Arabidopsis lyrata HOM05D003461 ORTHO05D004386 2.4e-85 320.1 384 46.6
AT2G25660 Arabidopsis thaliana HOM05D003461 ORTHO05D004386 4.1e-85 319.3 404 45.3
FvH4_2g30180 Fragaria vesca HOM05D003461 ORTHO05D004386 4.1e-85 319.3 403 49.1
TAR383G0906 Trochodendron aralioides HOM05D003461 ORTHO05D004386 6.9e-85 318.5 472 41.9
Dinv30215 Davidia involucrata HOM05D003461 ORTHO05D004386 7.6e-84 315.1 458 43.4
MD15G1115000 Malus domestica HOM05D003461 ORTHO05D004386 1.3e-83 314.3 404 46.5
Aa31sc76G80 Aethionema arabicum HOM05D003461 ORTHO05D004386 1.4e-82 310.8 404 45.3
CANSAT01G0438 Cannabis sativa HOM05D003461 ORTHO05D004386 1.9e-82 310.5 381 48.0
FAN15G0070 Fragaria x ananassa HOM05D003461 ORTHO05D004386 4.6e-81 305.8 403 47.6
FAN20G1067 Fragaria x ananassa HOM05D003461 ORTHO05D004386 4.6e-81 305.8 397 47.6
FAN24G1347 Fragaria x ananassa HOM05D003461 ORTHO05D004386 6.1e-81 305.4 417 46.8
FAN27G2808 Fragaria x ananassa HOM05D003461 ORTHO05D004386 6.1e-81 305.4 403 47.1
Thhalv10000008m.g Eutrema salsugineum HOM05D003461 ORTHO05D004386 2.3e-80 303.5 395 44.1
Carub.0004s0545 Capsella rubella HOM05D003461 ORTHO05D004386 7.4e-79 298.5 397 44.1
Actinidia15712 Actinidia chinensis HOM05D003461 ORTHO05D004386 1.6e-78 297.4 410 43.4
Sp4g05280 Schrenkiella parvula HOM05D003461 ORTHO05D004386 2.8e-78 296.6 405 44.2
Dinv35880 Davidia involucrata HOM05D003461 ORTHO05D004386 6.3e-78 295.4 374 49.7
THA.LOC104819890 Tarenaya hassleriana HOM05D003461 ORTHO05D004386 1.4e-77 294.3 382 46.6
BcaB06g28084 Brassica carinata HOM05D003461 ORTHO05D004386 2.0e-76 290.4 371 45.8
PGR044G2079 Punica granatum HOM05D003461 ORTHO05D004386 1.0e-75 288.1 392 44.6
BraA04t17575Z Brassica rapa HOM05D003461 ORTHO05D004386 2.2e-75 287.0 391 45.5
Cc08_g08280 Coffea canephora HOM05D003461 ORTHO05D004386 2.9e-75 286.6 444 41.0
A04p19870 Brassica napus HOM05D003461 ORTHO05D004386 3.8e-75 286.2 391 45.3
BcaC02g08333 Brassica carinata HOM05D003461 ORTHO05D004386 3.2e-74 283.1 391 45.0
BolC4t27084H Brassica oleracea HOM05D003461 ORTHO05D004386 3.2e-74 283.1 391 45.0
Eucgr.C02859 Eucalyptus grandis HOM05D003461 ORTHO05D004386 4.2e-74 282.7 375 44.8
C04p55600 Brassica napus HOM05D003461 ORTHO05D004386 1.6e-73 280.8 391 44.8
GSVIVG01035727001 Vitis vinifera HOM05D003461 ORTHO05D004386 6.1e-73 278.9 409 44.7
CSS0003133 Camellia sinensis var. sinensis HOM05D003461 ORTHO05D004386 6.7e-72 275.4 432 39.8
Glyma.14G129500 Glycine max HOM05D003461 ORTHO05D004386 8.8e-72 275.0 411 43.6
Lj5g0000879 Lotus japonicus HOM05D003461 ORTHO05D004386 1.7e-70 270.8 399 41.9
Lalb_Chr11g0063991 Lupinus albus HOM05D003461 ORTHO05D004386 5.3e-69 265.8 404 43.1
Nn2g11834 Nelumbo nucifera HOM05D003461 ORTHO05D004386 2.0e-68 263.8 242 56.6
DCAR_006261 Daucus carota HOM05D003461 ORTHO05D004386 3.4e-68 263.1 244 56.6
VMungo0647G1896 Vigna mungo HOM05D003461 ORTHO05D004386 1.1e-66 258.1 400 43.5
Medtr1g010300 Medicago truncatula HOM05D003461 ORTHO05D004386 2.5e-66 256.9 406 42.4
Rhsim07G0154200 Rhododendron simsii HOM05D003461 ORTHO05D004386 9.4e-66 255.0 423 40.9
PSO782G2185 Papaver somniferum HOM05D003461 ORTHO05D004386 1.2e-65 254.6 444 40.1
Glyma.17G204000 Glycine max HOM05D003461 ORTHO05D004386 2.1e-65 253.8 409 43.0
Lj7C712G2 Lonicera japonica HOM05D003461 ORTHO05D004386 2.1e-65 253.8 388 41.8
PSO063G5065 Papaver somniferum HOM05D003461 ORTHO05D004386 1.4e-64 251.1 444 39.2
Phvul.001G055800 Phaseolus vulgaris HOM05D003461 ORTHO05D004386 1.4e-64 251.1 396 41.9
Aqoxy7G01835 Aquilegia oxysepala HOM05D003461 ORTHO05D004386 2.3e-64 250.4 252 53.2
ECA240G1832 Erigeron canadensis HOM05D003461 ORTHO05D004386 2.0e-63 247.3 218 60.1
Nitab4.5_0000125g0120 Nicotiana tabacum HOM05D003461 ORTHO05D004386 1.3e-62 244.6 278 49.6
Nitab4.5_0009600g0020 Nicotiana tabacum HOM05D003461 ORTHO05D004386 1.1e-61 241.5 278 49.6
Sc09g0008870 Simmondsia chinensis HOM05D003461 ORTHO05D004386 1.1e-61 241.5 243 51.9
EL10Ac2g02534 Beta vulgaris HOM05D003461 ORTHO05D004386 1.4e-61 241.1 426 39.7
ClCG05G017220 Citrullus lanatus HOM05D003461 ORTHO05D004386 2.4e-61 240.4 382 40.6
Hund03002 Selenicereus undatus HOM05D003461 ORTHO05D004386 2.4e-61 240.4 239 51.0
Migut.A00272 Erythranthe guttata HOM05D003461 ORTHO05D004386 3.1e-61 240.0 441 39.2
Peaxi162Scf00105g01315 Petunia axillaris HOM05D003461 ORTHO05D004386 3.1e-61 240.0 258 51.6
CsaV3_3G046700 Cucumis sativus L. HOM05D003461 ORTHO05D004386 5.3e-61 239.2 378 41.0
arahy.Tifrunner.gnm1.ann1.4R6GA4 Arachis hypogaea HOM05D003461 ORTHO05D004386 9.1e-61 238.4 393 42.5
Actinidia14640 Actinidia chinensis HOM05D003461 ORTHO05D004386 1.5e-60 237.7 380 39.5
arahy.Tifrunner.gnm1.ann1.3VS957 Arachis hypogaea HOM05D003461 ORTHO05D004386 5.9e-60 235.7 393 42.0
Medtr3g108080 Medicago truncatula HOM05D003461 ORTHO05D004386 1.0e-59 235.0 334 46.4
TPR.G34693 Trifolium pratense HOM05D003461 ORTHO05D004386 3.8e-59 233.0 307 48.5
Ca_12907_v3 Cicer arietinum L. HOM05D003461 ORTHO05D004386 6.5e-59 232.3 199 62.3
Lj1g0021913 Lotus japonicus HOM05D003461 ORTHO05D004386 6.5e-59 232.3 267 49.4
Psat5g027760 Pisum sativum HOM05D003461 ORTHO05D004386 8.5e-59 231.9 264 52.7
Ca_15696_v3 Cicer arietinum L. HOM05D003461 ORTHO05D004386 1.9e-58 230.7 246 55.7
MELO3C003666.2 Cucumis melo HOM05D003461 ORTHO05D004386 7.2e-58 228.8 380 39.5
Glyma.04G072400 Glycine max HOM05D003461 ORTHO05D004386 1.6e-57 227.6 401 39.7
Sed0017351 Sechium edule HOM05D003461 ORTHO05D004386 1.6e-57 227.6 375 39.7
AUR62024833 Chenopodium quinoa HOM05D003461 ORTHO05D004386 3.6e-57 226.5 256 50.8
SalBow4G0560 Salvia bowleyana HOM05D003461 ORTHO05D004386 4.7e-57 226.1 266 47.7
AUR62032384 Chenopodium quinoa HOM05D003461 ORTHO05D004386 6.1e-57 225.7 256 50.0
Lsat_1_v5_gn_5_45581 Lactuca sativa HOM05D003461 ORTHO05D004386 6.1e-57 225.7 210 56.7
CAN.G21.14 Capsicum annuum HOM05D003461 ORTHO05D004386 1.4e-56 224.6 243 51.4
Psat6g031040 Pisum sativum HOM05D003461 ORTHO05D004386 1.8e-56 224.2 404 39.4
AUR62011223 Chenopodium quinoa HOM05D003461 ORTHO05D004386 2.3e-56 223.8 246 52.0
Solyc08g067870.2 Solanum lycopersicum HOM05D003461 ORTHO05D004386 3.0e-56 223.4 232 52.2
Sopen08g021790 Solanum pennellii HOM05D003461 ORTHO05D004386 3.0e-56 223.4 258 48.8
unitig_747.g21880 Utricularia gibba HOM05D003461 ORTHO05D004386 5.2e-56 222.6 269 46.5
Glyma.06G073700 Glycine max HOM05D003461 ORTHO05D004386 1.5e-55 221.1 398 37.7
VMungo1309G0474 Vigna mungo HOM05D003461 ORTHO05D004386 4.4e-55 219.5 400 38.8
SGA_v2.0_scaffold27G11498 Striga asiatica HOM05D003461 ORTHO05D004386 5.7e-55 219.2 244 52.0
Ah.12g063310 Amaranthus hybridus HOM05D003461 ORTHO05D004386 1.8e-53 214.2 238 52.9
Phvul.009G098100 Phaseolus vulgaris HOM05D003461 ORTHO05D004386 1.8e-53 214.2 397 39.5
TPR.G20094 Trifolium pratense HOM05D003461 ORTHO05D004386 1.8e-53 214.2 375 38.7
Zm00001eb122270 Zea mays HOM05D003461 ORTHO05D004386 4.5e-52 209.5 222 52.7
HanXRQChr08g0221141 Helianthus annuus HOM05D003461 ORTHO05D004386 6.5e-51 205.7 230 51.7
Os01g0179400 Oryza sativa ssp. japonica HOM05D003461 ORTHO05D004386 3.2e-50 203.4 231 51.1
HPP92_015178 Vanilla planifolia HOM05D003461 ORTHO05D004386 3.0e-40 170.2 223 45.7
ATR0037G074 Amborella trichopoda HOM05D003461 ORTHO05D004386 4.9e-38 162.9 231 41.6
Oeu019417.3 Olea europaea HOM05D003461 ORTHO05D004386 3.3e-34 150.2 402 32.8
SEGI_30777 Sequoiadendron giganteum HOM05D003461 ORTHO05D004386 1.7e-19 101.3 234 34.6
AagrBONN_evm.TU.Sc2ySwM_228.5632 Anthoceros agrestis HOM05D003461 ORTHO05D004386 1.1e-18 98.6 137 45.3
Lsat_1_v5_gn_2_27900 Lactuca sativa HOM05D003461 ORTHO05D004386 6.8e-16 89.4 73 60.3
Lsat_1_v5_gn_4_90040 Lactuca sativa HOM05D003461 ORTHO05D004386 6.8e-16 89.4 73 60.3
Lsat_1_v5_gn_5_111480 Lactuca sativa HOM05D003461 ORTHO05D004386 6.8e-16 89.4 73 60.3
Mapoly0004s0170 Marchantia polymorpha HOM05D003461 ORTHO05D004386 6.8e-16 89.4 270 31.1
Lsat_1_v5_gn_8_141060 Lactuca sativa HOM05D003461 ORTHO05D004386 8.9e-16 89.0 77 58.4
Lsat_1_v5_gn_9_53361 Lactuca sativa HOM05D003461 ORTHO05D004386 1.5e-15 88.2 73 60.3
Pp3c4_150 Physcomitrium patens HOM05D003461 ORTHO05D004386 9.8e-15 85.5 94 47.9
Lsat_1_v5_gn_4_58000 Lactuca sativa HOM05D003461 ORTHO05D004386 6.4e-14 82.8 73 57.5
CBR_g20101 Chara braunii HOM05D003461 ORTHO05D004386 1.9e-13 81.3 97 47.4
SMO347G0057 Selaginella moellendorffii HOM05D003461 ORTHO05D004386 3.6e-09 67.0 95 34.7


User provided reference genes

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