Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 1.8e-41 172.2 86 100.0
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 6.3e-31 137.1 74 86.5
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 6.3e-31 137.1 74 86.5
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 6.3e-31 137.1 74 86.5
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 1.1e-30 136.3 74 85.1
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 1.4e-30 136.0 74 86.5
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 7.0e-30 133.7 74 82.4
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 7.0e-30 133.7 79 82.3
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 9.1e-30 133.3 85 75.3
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 9.1e-30 133.3 74 83.8
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 1.2e-29 132.9 74 85.1
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 1.2e-29 132.9 74 83.8
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 1.6e-29 132.5 74 83.8
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 2.0e-29 132.1 85 76.5
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 2.6e-29 131.7 74 83.8
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 2.6e-29 131.7 86 74.4
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 2.6e-29 131.7 74 83.8
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 3.5e-29 131.3 73 84.9
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 3.5e-29 131.3 74 83.8
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 3.5e-29 131.3 88 75.0
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 5.9e-29 130.6 76 82.9
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 7.7e-29 130.2 74 83.8
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 7.7e-29 130.2 86 73.3
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 1.0e-28 129.8 85 72.9
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 1.0e-28 129.8 74 79.7
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 1.3e-28 129.4 73 82.2
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 2.9e-28 128.3 75 82.7
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 2.9e-28 128.3 75 82.7
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 2.9e-28 128.3 86 68.6
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 3.8e-28 127.9 74 81.1
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 3.8e-28 127.9 73 82.2
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 8.5e-28 126.7 73 80.8
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 8.5e-28 126.7 74 79.7
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 1.5e-27 125.9 74 81.1
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 1.9e-27 125.6 79 69.6
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 2.5e-27 125.2 73 79.5
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 2.5e-27 125.2 75 80.0
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 2.5e-27 125.2 82 76.8
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 2.5e-27 125.2 82 76.8
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 3.2e-27 124.8 73 83.6
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 4.2e-27 124.4 72 81.9
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 4.2e-27 124.4 74 77.0
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 4.2e-27 124.4 73 83.6
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 5.5e-27 124.0 79 69.6
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 5.5e-27 124.0 73 83.6
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 5.5e-27 124.0 82 76.8
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 7.2e-27 123.6 75 76.0
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 7.2e-27 123.6 74 78.4
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 9.4e-27 123.2 74 78.4
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 9.4e-27 123.2 74 77.0
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 1.6e-26 122.5 78 73.1
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 1.6e-26 122.5 79 68.4
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 2.1e-26 122.1 82 75.6
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 2.7e-26 121.7 74 78.4
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 3.6e-26 121.3 74 75.7
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 3.6e-26 121.3 74 78.4
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 3.6e-26 121.3 73 75.3
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 4.7e-26 120.9 73 75.3
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 4.7e-26 120.9 73 75.3
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 6.1e-26 120.6 73 76.7
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 6.1e-26 120.6 73 75.3
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 6.1e-26 120.6 73 75.3
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 6.1e-26 120.6 74 74.3
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 8.0e-26 120.2 73 74.0
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 8.0e-26 120.2 85 64.7
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 8.0e-26 120.2 79 70.9
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 8.0e-26 120.2 79 67.1
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 1.0e-25 119.8 74 78.4
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 1.4e-25 119.4 73 76.7
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 1.4e-25 119.4 74 74.3
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 1.4e-25 119.4 74 74.3
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.8e-25 119.0 74 74.3
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 2.3e-25 118.6 78 70.5
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 3.0e-25 118.2 74 70.3
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 4.0e-25 117.9 74 73.0
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 4.0e-25 117.9 78 67.9
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 6.7e-25 117.1 75 72.0
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 6.7e-25 117.1 74 68.9
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 6.7e-25 117.1 73 74.0
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 1.5e-24 115.9 83 66.3
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 1.5e-24 115.9 86 65.1
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 2.0e-24 115.5 81 67.9
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 2.0e-24 115.5 79 65.8
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 2.6e-24 115.2 74 71.6
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 4.4e-24 114.4 81 66.7
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 5.7e-24 114.0 74 68.9
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 5.7e-24 114.0 74 70.3
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 5.7e-24 114.0 73 72.6
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 7.5e-24 113.6 75 73.3
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 7.5e-24 113.6 75 73.3
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 7.5e-24 113.6 74 70.3
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 9.7e-24 113.2 73 75.3
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 2.8e-23 111.7 73 67.1
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 8.3e-23 110.2 74 66.2
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 8.3e-23 110.2 74 66.2
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 8.3e-23 110.2 74 66.2
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 8.3e-23 110.2 73 71.2
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 1.4e-22 109.4 74 67.6
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 1.4e-22 109.4 74 70.3
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 2.4e-22 108.6 74 64.9
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 5.3e-22 107.5 74 63.5
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 1.2e-21 106.3 87 62.1
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 2.7e-21 105.1 55 87.3
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 2.5e-19 98.6 84 54.8
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 1.0e-17 93.2 72 56.9
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 1.0e-17 93.2 72 56.9
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 1.7e-15 85.9 72 54.2
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 4.8e-15 84.3 118 39.0
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 3.5e-13 78.2 50 74.0
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 4.5e-13 77.8 73 53.4
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 1.7e-12 75.9 85 48.2
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 3.8e-12 74.7 78 48.7
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 1.1e-11 73.2 40 77.5
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 5.5e-11 70.9 76 47.4
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 2.1e-10 68.9 42 69.0
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 8.0e-10 67.0 50 60.0
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 1.4e-09 66.2 42 66.7
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 2.3e-09 65.5 46 69.6
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 3.0e-09 65.1 42 66.7
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 2.6e-08 62.0 42 64.3
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 5.7e-08 60.8 31 90.3
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 2.2e-07 58.9 72 40.3
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 2.4e-06 55.5 32 81.2


User provided reference genes

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