Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c45157 Carica papaya HOM05D005126 ORTHO05D006169 1.0e-230 803.1 438 100.0
Cpa.g.sc871.1 Carica papaya HOM05D005126 ORTHO05D006169 1.5e-149 533.5 313 93.0
Thecc.06G207200 Theobroma cacao HOM05D005126 ORTHO05D006169 1.9e-139 500.0 457 63.2
Haze_06662 Corylus avellana HOM05D005126 ORTHO05D006169 1.6e-138 496.9 464 64.0
CiPaw.09G152800 Carya illinoinensis HOM05D005126 ORTHO05D006169 4.6e-138 495.4 464 62.1
Cfa000280 Carpinus fangiana HOM05D005126 ORTHO05D006169 2.0e-136 490.0 464 63.8
QL05p077365 Quercus lobata HOM05D005126 ORTHO05D006169 1.3e-135 487.3 465 61.9
Potri.004G030500 Populus trichocarpa HOM05D005126 ORTHO05D006169 2.6e-133 479.6 450 63.6
Potri.011G032200 Populus trichocarpa HOM05D005126 ORTHO05D006169 2.9e-132 476.1 448 61.4
Duzib192G0985 Durio zibethinus HOM05D005126 ORTHO05D006169 4.2e-131 472.2 457 61.5
COL.COLO4_33008 Corchorus olitorius HOM05D005126 ORTHO05D006169 7.4e-128 461.5 457 59.5
Prupe.4G030200 Prunus persica HOM05D005126 ORTHO05D006169 1.7e-127 460.3 457 59.7
Sabra11G0019400 Salix brachista HOM05D005126 ORTHO05D006169 1.7e-127 460.3 451 59.6
Ciclev10007263m.g Citrus clementina HOM05D005126 ORTHO05D006169 3.7e-127 459.1 455 59.8
Duzib160G0882 Durio zibethinus HOM05D005126 ORTHO05D006169 4.8e-127 458.8 457 60.4
Sabra11G0025300 Salix brachista HOM05D005126 ORTHO05D006169 7.0e-126 454.9 450 59.6
MD05G1335200 Malus domestica HOM05D005126 ORTHO05D006169 9.1e-126 454.5 457 58.2
GSVIVG01006404001 Vitis vinifera HOM05D005126 ORTHO05D006169 1.5e-123 447.2 447 60.0
Dinv17855 Davidia involucrata HOM05D005126 ORTHO05D006169 7.2e-123 444.9 463 55.9
MD10G1310700 Malus domestica HOM05D005126 ORTHO05D006169 9.4e-123 444.5 455 58.0
TWI63G0986 Tripterygium wilfordii HOM05D005126 ORTHO05D006169 9.4e-123 444.5 460 57.0
RcHm_v2.0_Chr5g0004701 Rosa chinensis HOM05D005126 ORTHO05D006169 1.1e-120 437.6 459 56.2
TAR624G1039 Trochodendron aralioides HOM05D005126 ORTHO05D006169 7.4e-120 434.9 463 56.4
Gorai.010G253600 Gossypium raimondii HOM05D005126 ORTHO05D006169 1.1e-118 431.0 448 59.2
Nitab4.5_0000503g0050 Nicotiana tabacum HOM05D005126 ORTHO05D006169 1.8e-118 430.3 463 55.9
Gohir.D06G212500 Gossypium hirsutum HOM05D005126 ORTHO05D006169 7.0e-118 428.3 448 58.9
Actinidia05547 Actinidia chinensis HOM05D005126 ORTHO05D006169 2.0e-117 426.8 454 56.2
Gohir.A06G208600 Gossypium hirsutum HOM05D005126 ORTHO05D006169 4.5e-117 425.6 448 58.7
Gohir.A10G017400 Gossypium hirsutum HOM05D005126 ORTHO05D006169 7.7e-117 424.9 457 57.8
CANSAT35G0768 Cannabis sativa HOM05D005126 ORTHO05D006169 2.2e-116 423.3 445 57.5
FvH4_3g03041 Fragaria vesca HOM05D005126 ORTHO05D006169 1.5e-115 420.6 457 56.0
Manes.15G164500 Manihot esculenta HOM05D005126 ORTHO05D006169 3.2e-115 419.5 450 57.3
FAN21G2838 Fragaria x ananassa HOM05D005126 ORTHO05D006169 1.2e-114 417.5 457 55.8
Sopen02g024620 Solanum pennellii HOM05D005126 ORTHO05D006169 4.7e-114 415.6 443 55.8
PGSC0003DMG400021720 Solanum tuberosum HOM05D005126 ORTHO05D006169 6.1e-114 415.2 443 55.8
MELO3C007347.2 Cucumis melo HOM05D005126 ORTHO05D006169 8.0e-114 414.8 443 57.6
vmacro03741 Vaccinium macrocarpon HOM05D005126 ORTHO05D006169 1.8e-113 413.7 451 55.9
CSS0033857 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 6.8e-113 411.8 442 55.7
Rhsim13G0163000 Rhododendron simsii HOM05D005126 ORTHO05D006169 2.0e-112 410.2 416 57.9
Nitab4.5_0006456g0050 Nicotiana tabacum HOM05D005126 ORTHO05D006169 4.4e-112 409.1 463 54.4
Aa31LG2G9130 Aethionema arabicum HOM05D005126 ORTHO05D006169 2.8e-111 406.4 443 57.6
CsaV3_6G049470 Cucumis sativus L. HOM05D005126 ORTHO05D006169 8.3e-111 404.8 444 56.8
Peaxi162Scf00931g00055 Petunia axillaris HOM05D005126 ORTHO05D006169 1.1e-110 404.4 462 55.0
Thhalv10023224m.g Eutrema salsugineum HOM05D005126 ORTHO05D006169 3.1e-110 402.9 446 56.3
Sed0023382 Sechium edule HOM05D005126 ORTHO05D006169 3.1e-110 402.9 445 58.4
Lalb_Chr09g0327171 Lupinus albus HOM05D005126 ORTHO05D006169 7.7e-109 398.3 441 55.1
CAN.G424.91 Capsicum annuum HOM05D005126 ORTHO05D006169 1.0e-108 397.9 448 53.6
BcaB04g20363 Brassica carinata HOM05D005126 ORTHO05D006169 1.3e-108 397.5 439 56.0
Glyma.08G061700 Glycine max HOM05D005126 ORTHO05D006169 1.3e-108 397.5 458 54.6
VMungo0251G0970 Vigna mungo HOM05D005126 ORTHO05D006169 1.7e-108 397.1 460 52.8
ClCG01G022310 Citrullus lanatus HOM05D005126 ORTHO05D006169 3.8e-108 396.0 444 57.9
Glyma.07G187500 Glycine max HOM05D005126 ORTHO05D006169 5.0e-108 395.6 458 54.6
Lj4g0001880 Lotus japonicus HOM05D005126 ORTHO05D006169 5.0e-108 395.6 442 54.8
Ca_18455_v3 Cicer arietinum L. HOM05D005126 ORTHO05D006169 6.5e-108 395.2 440 55.2
PSO210G4646 Papaver somniferum HOM05D005126 ORTHO05D006169 8.5e-108 394.8 464 53.7
Nn1g03751 Nelumbo nucifera HOM05D005126 ORTHO05D006169 1.1e-107 394.4 464 53.4
Phvul.002G219000 Phaseolus vulgaris HOM05D005126 ORTHO05D006169 1.9e-107 393.7 460 52.8
AL2G14430 Arabidopsis lyrata HOM05D005126 ORTHO05D006169 3.6e-106 389.4 442 54.5
PSO832G1831 Papaver somniferum HOM05D005126 ORTHO05D006169 6.1e-106 388.7 464 52.6
FAN25G1045 Fragaria x ananassa HOM05D005126 ORTHO05D006169 1.4e-105 387.5 457 53.0
THA.LOC104809525 Tarenaya hassleriana HOM05D005126 ORTHO05D006169 4.0e-105 386.0 440 54.3
CARHR050640 Cardamine hirsuta HOM05D005126 ORTHO05D006169 8.8e-105 384.8 445 54.4
TAR626G0500 Trochodendron aralioides HOM05D005126 ORTHO05D006169 1.2e-104 384.4 426 55.2
arahy.Tifrunner.gnm1.ann1.JX13SW Arachis hypogaea HOM05D005126 ORTHO05D006169 2.0e-104 383.6 459 53.2
Oeu045309.1 Olea europaea HOM05D005126 ORTHO05D006169 2.0e-104 383.6 452 52.2
Carub.0002s0337 Capsella rubella HOM05D005126 ORTHO05D006169 3.4e-104 382.9 442 53.2
arahy.Tifrunner.gnm1.ann1.7M140W Arachis hypogaea HOM05D005126 ORTHO05D006169 5.7e-104 382.1 459 52.9
Psat7g105840 Pisum sativum HOM05D005126 ORTHO05D006169 5.7e-104 382.1 453 54.1
Lj2C276T6 Lonicera japonica HOM05D005126 ORTHO05D006169 7.5e-104 381.7 443 52.8
Medtr4g092040 Medicago truncatula HOM05D005126 ORTHO05D006169 9.8e-104 381.3 455 53.4
Sp2g02860 Schrenkiella parvula HOM05D005126 ORTHO05D006169 9.8e-104 381.3 442 54.5
SalBow4G2671 Salvia bowleyana HOM05D005126 ORTHO05D006169 4.8e-103 379.0 457 50.8
BolC1t03845H Brassica oleracea HOM05D005126 ORTHO05D006169 4.1e-102 375.9 442 54.5
Sc05g0008390 Simmondsia chinensis HOM05D005126 ORTHO05D006169 4.1e-102 375.9 448 53.3
C01p38950 Brassica napus HOM05D005126 ORTHO05D006169 9.1e-102 374.8 442 54.3
Aqoxy4G01910 Aquilegia oxysepala HOM05D005126 ORTHO05D006169 1.6e-101 374.0 462 50.2
TPR.G13921 Trifolium pratense HOM05D005126 ORTHO05D006169 1.7e-100 370.5 451 53.0
CSS0041207 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 2.9e-100 369.8 440 51.8
A01p30560 Brassica napus HOM05D005126 ORTHO05D006169 1.1e-99 367.9 442 53.4
BraA01t03188Z Brassica rapa HOM05D005126 ORTHO05D006169 1.1e-99 367.9 442 53.4
MBI07_g11719_MAGBIO Magnolia biondii HOM05D005126 ORTHO05D006169 3.3e-99 366.3 459 51.0
AUR62006818 Chenopodium quinoa HOM05D005126 ORTHO05D006169 4.2e-99 365.9 446 51.3
MSTRG.4220 Avicennia marina HOM05D005126 ORTHO05D006169 2.1e-98 363.6 464 48.9
Cc02_g11860 Coffea canephora HOM05D005126 ORTHO05D006169 1.3e-95 354.4 441 51.0
Ah.06g190720 Amaranthus hybridus HOM05D005126 ORTHO05D006169 3.7e-95 352.8 443 49.2
AT1G61690 Arabidopsis thaliana HOM05D005126 ORTHO05D006169 3.2e-94 349.7 442 51.8
AUR62000477 Chenopodium quinoa HOM05D005126 ORTHO05D006169 2.0e-93 347.1 450 49.1
Hund23540 Selenicereus undatus HOM05D005126 ORTHO05D006169 2.9e-92 343.2 450 51.3
ECA236G2220 Erigeron canadensis HOM05D005126 ORTHO05D006169 8.6e-92 341.7 438 50.5
HanXRQChr05g0130831 Helianthus annuus HOM05D005126 ORTHO05D006169 1.1e-91 341.3 440 51.1
Os03g0669800 Oryza sativa ssp. japonica HOM05D005126 ORTHO05D006169 4.3e-91 339.3 456 46.9
SGA_v2.0_scaffold216G42402 Striga asiatica HOM05D005126 ORTHO05D006169 1.2e-90 337.8 441 48.8
EL10Ac4g09560 Beta vulgaris HOM05D005126 ORTHO05D006169 1.6e-90 337.4 448 48.7
Hma1.2p1_0809F.1_g221780 Hydrangea macrophylla HOM05D005126 ORTHO05D006169 6.1e-90 335.5 443 49.9
Zm00001eb245580 Zea mays HOM05D005126 ORTHO05D006169 1.8e-89 334.0 449 47.7
Gorai.011G019500 Gossypium raimondii HOM05D005126 ORTHO05D006169 3.4e-88 329.7 442 50.2
Migut.N00381 Erythranthe guttata HOM05D005126 ORTHO05D006169 9.8e-88 328.2 450 48.9
ATR0804G089 Amborella trichopoda HOM05D005126 ORTHO05D006169 2.9e-87 326.6 441 49.2
Oeu015946.3 Olea europaea HOM05D005126 ORTHO05D006169 8.3e-87 325.1 443 48.3
Gohir.D10G017600 Gossypium hirsutum HOM05D005126 ORTHO05D006169 2.4e-86 323.6 442 49.8
DCAR_004173 Daucus carota HOM05D005126 ORTHO05D006169 9.5e-83 311.6 440 48.0
Lsat_1_v5_gn_7_18540 Lactuca sativa HOM05D005126 ORTHO05D006169 3.6e-82 309.7 444 47.7
unitig_736.g22481 Utricularia gibba HOM05D005126 ORTHO05D006169 4.6e-77 292.7 441 44.7
Eucgr.H00119 Eucalyptus grandis HOM05D005126 ORTHO05D006169 6.6e-76 288.9 441 44.2
CDE12G0914 Ceratophyllum demersum HOM05D005126 ORTHO05D006169 2.8e-74 283.5 391 47.6
HPP92_016843 Vanilla planifolia HOM05D005126 ORTHO05D006169 3.6e-74 283.1 358 50.6
CDE01G0539 Ceratophyllum demersum HOM05D005126 ORTHO05D006169 1.1e-73 281.6 396 46.2
Actinidia26962 Actinidia chinensis HOM05D005126 ORTHO05D006169 1.8e-73 280.8 351 49.6
PGR031G2928 Punica granatum HOM05D005126 ORTHO05D006169 1.1e-70 271.6 496 41.1
CSS0026607 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 3.3e-67 260.0 341 48.7
SEGI_24274 Sequoiadendron giganteum HOM05D005126 ORTHO05D006169 4.7e-66 256.1 567 35.1
Prupe.4G011500 Prunus persica HOM05D005126 ORTHO05D006169 3.8e-63 246.5 420 43.8
Pp3c16_8350 Physcomitrium patens HOM05D005126 ORTHO05D006169 7.4e-43 179.1 542 32.1
arahy.Tifrunner.gnm1.ann1.TF7ZQX Arachis hypogaea HOM05D005126 ORTHO05D006169 3.1e-41 173.7 172 58.1
Atru.chr10.2050 Acer truncatum HOM05D005126 ORTHO05D006169 4.1e-33 146.7 127 63.8
SMO141G0003 Selaginella moellendorffii HOM05D005126 ORTHO05D006169 1.2e-32 145.2 323 37.8
AagrBONN_evm.TU.Sc2ySwM_368.2701 Anthoceros agrestis HOM05D005126 ORTHO05D006169 6.5e-31 139.4 517 27.5
SHI02133 Sapria himalayana HOM05D005126 ORTHO05D006169 1.0e-28 132.1 264 36.0
Atru.chr10.2052 Acer truncatum HOM05D005126 ORTHO05D006169 4.1e-25 120.2 101 63.4
Mapoly0032s0118 Marchantia polymorpha HOM05D005126 ORTHO05D006169 3.2e-22 110.5 454 29.3
Atru.chr10.2051 Acer truncatum HOM05D005126 ORTHO05D006169 8.2e-18 95.9 85 63.5
Psat2g029640 Pisum sativum HOM05D005126 ORTHO05D006169 5.9e-16 89.7 89 56.2
Psat2g029560 Pisum sativum HOM05D000058 ORTHO05D000077 1.3e-07 62.0 61 52.5


User provided reference genes

Program Settings