Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 1.2e-64 249.6 118 100.0
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 3.2e-33 145.2 69 98.6
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 1.6e-32 142.9 69 95.7
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 4.6e-32 141.4 69 92.8
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 6.0e-32 141.0 69 91.3
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 7.8e-32 140.6 69 89.9
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 1.3e-31 139.8 69 91.3
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 1.3e-31 139.8 69 91.3
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.3e-31 139.8 69 92.8
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.3e-31 139.8 69 92.8
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 1.3e-31 139.8 69 92.8
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 2.3e-31 139.0 69 91.3
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 2.3e-31 139.0 69 91.3
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 3.0e-31 138.7 69 88.4
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 3.0e-31 138.7 69 88.4
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 3.9e-31 138.3 69 91.3
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 3.9e-31 138.3 69 87.0
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 5.1e-31 137.9 69 89.9
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 5.1e-31 137.9 69 91.3
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 5.1e-31 137.9 69 87.0
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 5.1e-31 137.9 69 88.4
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 5.1e-31 137.9 69 88.4
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 6.6e-31 137.5 69 91.3
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 6.6e-31 137.5 69 89.9
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 6.6e-31 137.5 69 89.9
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 6.6e-31 137.5 69 88.4
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 6.6e-31 137.5 69 88.4
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 6.6e-31 137.5 69 88.4
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 6.6e-31 137.5 69 88.4
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 6.6e-31 137.5 69 91.3
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 8.6e-31 137.1 69 88.4
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 8.6e-31 137.1 69 88.4
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 1.1e-30 136.7 69 89.9
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 1.1e-30 136.7 69 89.9
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 1.5e-30 136.3 69 87.0
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 1.5e-30 136.3 69 88.4
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 1.5e-30 136.3 69 89.9
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 1.5e-30 136.3 69 87.0
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 1.5e-30 136.3 69 87.0
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 1.5e-30 136.3 69 87.0
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 1.5e-30 136.3 69 87.0
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 1.5e-30 136.3 69 87.0
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 1.5e-30 136.3 69 85.5
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 1.5e-30 136.3 69 89.9
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 1.9e-30 136.0 69 87.0
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 1.9e-30 136.0 69 87.0
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 1.9e-30 136.0 69 87.0
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 1.9e-30 136.0 69 88.4
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 1.9e-30 136.0 69 85.5
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 1.9e-30 136.0 69 87.0
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 1.9e-30 136.0 69 87.0
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 1.9e-30 136.0 69 85.5
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 1.9e-30 136.0 69 88.4
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 2.5e-30 135.6 69 85.5
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 2.5e-30 135.6 69 85.5
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 2.5e-30 135.6 69 88.4
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 2.5e-30 135.6 69 87.0
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 2.5e-30 135.6 69 88.4
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 2.5e-30 135.6 69 87.0
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 2.5e-30 135.6 69 88.4
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 2.5e-30 135.6 69 87.0
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 3.3e-30 135.2 69 85.5
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 3.3e-30 135.2 69 85.5
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 3.3e-30 135.2 69 89.9
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 3.3e-30 135.2 69 88.4
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 3.3e-30 135.2 69 87.0
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 3.3e-30 135.2 69 87.0
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 4.3e-30 134.8 69 85.5
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 4.3e-30 134.8 69 85.5
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 4.3e-30 134.8 69 87.0
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 4.3e-30 134.8 69 84.1
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 4.3e-30 134.8 69 85.5
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 4.3e-30 134.8 69 84.1
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 5.6e-30 134.4 69 85.5
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 5.6e-30 134.4 69 84.1
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 5.6e-30 134.4 69 87.0
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 7.3e-30 134.0 69 87.0
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 7.3e-30 134.0 69 85.5
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 7.3e-30 134.0 69 85.5
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 7.3e-30 134.0 69 87.0
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 7.3e-30 134.0 69 85.5
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 9.6e-30 133.7 69 87.0
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 9.6e-30 133.7 69 87.0
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 9.6e-30 133.7 69 87.0
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 9.6e-30 133.7 69 85.5
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 1.2e-29 133.3 69 85.5
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.2e-29 133.3 69 87.0
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 2.1e-29 132.5 69 85.5
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 2.8e-29 132.1 69 87.0
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 3.6e-29 131.7 69 82.6
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 4.7e-29 131.3 71 81.7
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 4.7e-29 131.3 69 84.1
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 6.2e-29 131.0 69 84.1
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 6.2e-29 131.0 71 83.1
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 6.2e-29 131.0 69 84.1
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 6.2e-29 131.0 69 84.1
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 6.2e-29 131.0 69 84.1
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 6.2e-29 131.0 69 84.1
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 8.1e-29 130.6 69 85.5
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 1.1e-28 130.2 69 87.0
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 1.1e-28 130.2 69 84.1
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 1.1e-28 130.2 69 81.2
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 1.1e-28 130.2 69 81.2
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 1.1e-28 130.2 69 84.1
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 1.1e-28 130.2 69 87.0
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 1.8e-28 129.4 71 81.7
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 2.4e-28 129.0 67 85.1
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.0e-27 125.9 69 81.2
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 2.6e-27 125.6 76 75.0
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 9.9e-27 123.6 69 82.6
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 1.1e-25 120.2 69 75.4
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 1.9e-25 119.4 67 76.1
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 4.2e-25 118.2 69 73.9
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 2.1e-24 115.9 69 75.4
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 5.1e-23 111.3 69 71.0
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 5.3e-20 101.3 66 65.2
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 2.6e-19 99.0 65 63.1
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 6.4e-18 94.4 66 59.1
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 6.4e-18 94.4 66 60.6
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 3.2e-17 92.0 63 60.3
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 1.5e-14 83.2 52 76.9
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 3.3e-06 55.5 34 70.6


User provided reference genes

Program Settings