Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c44692 Carica papaya HOM05D006847 ORTHO05D008685 2.3e-81 305.4 146 100.0
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 1.4e-70 269.6 141 86.5
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 2.4e-70 268.9 142 84.5
Actinidia31921 Actinidia chinensis HOM05D006847 ORTHO05D008685 5.2e-70 267.7 142 82.4
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 9.0e-70 266.9 145 82.1
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 2.0e-69 265.8 141 84.4
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 2.0e-69 265.8 141 85.1
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 2.0e-69 265.8 141 85.1
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 3.4e-69 265.0 141 83.0
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 3.4e-69 265.0 141 84.4
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 3.4e-69 265.0 141 85.1
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 5.8e-69 264.2 141 83.0
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 5.8e-69 264.2 141 84.4
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 7.6e-69 263.8 141 82.3
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 1.3e-68 263.1 141 85.1
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 1.3e-68 263.1 141 84.4
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 1.7e-68 262.7 141 85.1
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 2.2e-68 262.3 141 80.9
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 2.9e-68 261.9 141 85.1
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 2.9e-68 261.9 142 81.7
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 2.9e-68 261.9 141 83.0
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 2.9e-68 261.9 142 83.1
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 3.8e-68 261.5 141 83.7
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 3.8e-68 261.5 141 82.3
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 6.4e-68 260.8 141 83.7
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 6.4e-68 260.8 140 82.1
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 6.4e-68 260.8 143 79.7
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 8.4e-68 260.4 141 83.7
FAN22G0943 Fragaria x ananassa HOM05D006847 ORTHO05D008685 8.4e-68 260.4 141 82.3
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 8.4e-68 260.4 141 82.3
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 1.1e-67 260.0 141 81.6
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 1.1e-67 260.0 143 79.7
Actinidia19898 Actinidia chinensis HOM05D006847 ORTHO05D008685 2.4e-67 258.8 141 81.6
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 2.4e-67 258.8 141 80.9
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 2.4e-67 258.8 145 78.6
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 2.4e-67 258.8 141 82.3
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 3.2e-67 258.5 141 80.9
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 4.2e-67 258.1 141 80.9
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 4.2e-67 258.1 142 81.0
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 4.2e-67 258.1 142 81.0
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 5.4e-67 257.7 141 81.6
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 7.1e-67 257.3 141 82.3
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 7.1e-67 257.3 141 80.9
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 1.2e-66 256.5 141 81.6
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 1.6e-66 256.1 143 79.7
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 1.6e-66 256.1 142 81.0
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 1.6e-66 256.1 141 82.3
Psat2g097440 Pisum sativum HOM05D006847 ORTHO05D008685 2.1e-66 255.8 142 78.9
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 3.5e-66 255.0 141 78.7
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 3.5e-66 255.0 141 80.1
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 3.5e-66 255.0 141 81.6
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 4.6e-66 254.6 141 79.4
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 4.6e-66 254.6 141 80.1
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 4.6e-66 254.6 144 78.5
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 6.0e-66 254.2 141 80.1
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 7.8e-66 253.8 141 80.1
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 1.0e-65 253.4 141 79.4
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 1.7e-65 252.7 141 80.9
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 1.7e-65 252.7 141 80.9
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 1.7e-65 252.7 141 79.4
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 3.9e-65 251.5 141 80.9
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 6.6e-65 250.8 142 76.8
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 8.7e-65 250.4 141 80.9
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 1.1e-64 250.0 141 80.1
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 1.1e-64 250.0 141 78.0
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 1.5e-64 249.6 145 75.2
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 2.5e-64 248.8 141 76.6
Medtr8g069545 Medicago truncatula HOM05D006847 ORTHO05D008685 2.5e-64 248.8 142 79.6
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 7.3e-64 247.3 143 79.0
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 2.1e-63 245.7 144 76.4
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 3.6e-63 245.0 141 77.3
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 4.0e-62 241.5 141 76.6
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 1.2e-61 240.0 143 74.1
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 9.9e-61 236.9 141 75.2
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 2.9e-60 235.3 142 71.8
ATR0691G163 Amborella trichopoda HOM05D006847 ORTHO05D008685 7.1e-59 230.7 142 71.8
Nn4g23575 Nelumbo nucifera HOM05D006847 ORTHO05D008685 3.3e-56 221.9 126 79.4
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 2.0e-53 212.6 143 67.1
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 4.5e-53 211.5 142 69.7
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 2.9e-52 208.8 141 66.0
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 4.9e-52 208.0 141 68.1
Mapoly0024s0128 Marchantia polymorpha HOM05D006847 ORTHO05D008685 4.2e-51 204.9 141 65.2
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 7.1e-51 204.1 141 63.8
SMO198G0052 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 7.9e-50 200.7 141 61.7
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 1.0e-49 200.3 143 65.0
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.8e-49 199.5 137 62.8
Pp3c4_7760 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.4e-46 189.9 137 63.5
Pp3c3_23290 Physcomitrium patens HOM05D006847 ORTHO05D008685 2.6e-45 185.7 137 60.6
Pp3c16_11950 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.6e-39 166.4 142 52.8
Solyc05g010630.4 Solanum lycopersicum HOM05D006847 ORTHO05D008685 1.8e-38 162.9 89 83.1
AagrBONN_evm.TU.Sc2ySwM_117.3731 Anthoceros agrestis HOM05D006847 ORTHO05D008685 4.6e-34 148.3 123 56.1
Sabra10G0104800 Salix brachista HOM05D006847 ORTHO05D008685 3.1e-30 135.6 110 58.2
RcHm_v2.0_Chr4g0437071 Rosa chinensis HOM05D006847 ORTHO05D008685 4.7e-26 121.7 65 80.0
arahy.Tifrunner.gnm1.ann1.JA47JZ Arachis hypogaea HOM05D006847 ORTHO05D008685 4.2e-19 98.6 48 85.4
MCO10G065 Micromonas commoda HOM05D006847 ORTHO05D008685 3.9e-17 92.0 138 42.0
Cre06.g263550 Chlamydomonas reinhardtii HOM05D006847 ORTHO05D008685 4.4e-16 88.6 127 38.6
CSS0031083 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 3.6e-10 68.9 35 85.7
FvH4_4g28930 Fragaria vesca HOM05D006847 ORTHO05D008685 5.2e-09 65.1 35 80.0
TPR.G29773 Trifolium pratense HOM05D006847 ORTHO05D008685 1.2e-08 63.9 34 76.5


User provided reference genes

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