Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c44243 Carica papaya HOM05D005096 ORTHO05D006566 2.7e-65 251.9 133 100.0
Atru.chr5.1434 Acer truncatum HOM05D005096 ORTHO05D006566 3.6e-49 198.4 133 76.7
Sabra05G0150000 Salix brachista HOM05D005096 ORTHO05D006566 4.7e-49 198.0 133 73.7
Sabra05G0159300 Salix brachista HOM05D005096 ORTHO05D006566 4.7e-49 198.0 133 73.7
Potri.005G209200 Populus trichocarpa HOM05D005096 ORTHO05D006566 6.1e-49 197.6 133 73.7
GSVIVG01011085001 Vitis vinifera HOM05D005096 ORTHO05D006566 6.7e-48 194.1 133 73.7
Manes.05G076137 Manihot esculenta HOM05D005096 ORTHO05D006566 1.1e-47 193.4 133 69.9
CANSAT25G0791 Cannabis sativa HOM05D005096 ORTHO05D006566 1.5e-47 193.0 133 72.9
Dinv32937 Davidia involucrata HOM05D005096 ORTHO05D006566 9.7e-47 190.3 132 75.0
Eucgr.H01482 Eucalyptus grandis HOM05D005096 ORTHO05D006566 4.8e-46 188.0 133 72.2
MSTRG.21562 Avicennia marina HOM05D005096 ORTHO05D006566 8.2e-46 187.2 132 72.7
ClCG07G000240 Citrullus lanatus HOM05D005096 ORTHO05D006566 1.1e-45 186.8 133 72.2
Sopen09g026860 Solanum pennellii HOM05D005096 ORTHO05D006566 1.1e-45 186.8 133 72.9
CiPaw.07G091400 Carya illinoinensis HOM05D005096 ORTHO05D006566 1.8e-45 186.0 133 71.4
THA.LOC104801235 Tarenaya hassleriana HOM05D005096 ORTHO05D006566 4.1e-45 184.9 132 71.2
CAN.G242.2 Capsicum annuum HOM05D005096 ORTHO05D006566 5.3e-45 184.5 129 72.9
Haze_04712 Corylus avellana HOM05D005096 ORTHO05D006566 5.3e-45 184.5 133 70.7
MELO3C014401.2 Cucumis melo HOM05D005096 ORTHO05D006566 5.3e-45 184.5 133 69.9
Duzib138G0773 Durio zibethinus HOM05D005096 ORTHO05D006566 9.1e-45 183.7 133 70.7
COL.COLO4_09099 Corchorus olitorius HOM05D005096 ORTHO05D006566 1.5e-44 183.0 133 69.9
Rhsim13G0024600 Rhododendron simsii HOM05D005096 ORTHO05D006566 1.5e-44 183.0 132 68.9
Potri.002G053366 Populus trichocarpa HOM05D005096 ORTHO05D006566 2.6e-44 182.2 133 69.2
Nitab4.5_0000458g0050 Nicotiana tabacum HOM05D005096 ORTHO05D006566 3.5e-44 181.8 130 72.3
Cfa006136 Carpinus fangiana HOM05D005096 ORTHO05D006566 4.5e-44 181.4 133 69.2
SalBow4G0282 Salvia bowleyana HOM05D005096 ORTHO05D006566 4.5e-44 181.4 130 71.5
CSS0045500 Camellia sinensis var. sinensis HOM05D005096 ORTHO05D006566 5.9e-44 181.0 133 70.7
arahy.Tifrunner.gnm1.ann1.TN9YNV Arachis hypogaea HOM05D005096 ORTHO05D006566 1.0e-43 180.3 133 69.2
EL10Ac7g17230 Beta vulgaris HOM05D005096 ORTHO05D006566 1.0e-43 180.3 133 67.7
Nitab4.5_0008435g0030 Nicotiana tabacum HOM05D005096 ORTHO05D006566 1.0e-43 180.3 130 70.8
arahy.Tifrunner.gnm1.ann1.2R7T4K Arachis hypogaea HOM05D005096 ORTHO05D006566 1.3e-43 179.9 133 69.2
Lj2A1173G9 Lonicera japonica HOM05D005096 ORTHO05D006566 1.3e-43 179.9 133 69.9
CsaV3_6G037120 Cucumis sativus L. HOM05D005096 ORTHO05D006566 1.7e-43 179.5 131 68.7
Oeu022870.1 Olea europaea HOM05D005096 ORTHO05D006566 2.2e-43 179.1 132 67.4
QL12p021914 Quercus lobata HOM05D005096 ORTHO05D006566 2.9e-43 178.7 131 69.5
FvH4_2g23600 Fragaria vesca HOM05D005096 ORTHO05D006566 3.8e-43 178.3 133 66.2
FAN24G2260 Fragaria x ananassa HOM05D005096 ORTHO05D006566 3.8e-43 178.3 133 66.2
TWI23G0916 Tripterygium wilfordii HOM05D005096 ORTHO05D006566 3.8e-43 178.3 131 68.7
Gohir.D08G075900 Gossypium hirsutum HOM05D005096 ORTHO05D006566 6.5e-43 177.6 133 67.7
Gorai.004G080200 Gossypium raimondii HOM05D005096 ORTHO05D006566 6.5e-43 177.6 133 67.7
HPP92_012091 Vanilla planifolia HOM05D003650 ORTHO05D004213 6.5e-43 177.6 130 66.9
Aqoxy2G03326 Aquilegia oxysepala HOM05D005096 ORTHO05D006566 8.5e-43 177.2 132 69.7
Prupe.8G241300 Prunus persica HOM05D005096 ORTHO05D006566 8.5e-43 177.2 132 68.9
RcHm_v2.0_Chr6g0291071 Rosa chinensis HOM05D005096 ORTHO05D006566 8.5e-43 177.2 133 65.4
FAN27G2515 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.1e-42 176.8 133 65.4
vmacro02569 Vaccinium macrocarpon HOM05D005096 ORTHO05D006566 1.1e-42 176.8 131 68.7
FAN15G1882 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.4e-42 176.4 133 65.4
FAN20G2556 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.4e-42 176.4 133 65.4
Actinidia09139 Actinidia chinensis HOM05D005096 ORTHO05D006566 1.9e-42 176.0 131 69.5
Cc01_g19500 Coffea canephora HOM05D005096 ORTHO05D006566 1.9e-42 176.0 133 66.9
AUR62043137 Chenopodium quinoa HOM05D005096 ORTHO05D006566 2.5e-42 175.6 133 66.2
Duzib133G0424 Durio zibethinus HOM05D005096 ORTHO05D006566 2.5e-42 175.6 131 67.9
HanXRQChr10g0282661 Helianthus annuus HOM05D005096 ORTHO05D006566 2.5e-42 175.6 132 65.9
Sp1g02185 Schrenkiella parvula HOM05D005096 ORTHO05D006566 2.5e-42 175.6 132 70.5
ECA247G0546 Erigeron canadensis HOM05D005096 ORTHO05D006566 3.2e-42 175.3 132 66.7
TAR633G0362 Trochodendron aralioides HOM05D005096 ORTHO05D006566 4.2e-42 174.9 132 69.7
Aa31LG1G9370 Aethionema arabicum HOM05D005096 ORTHO05D006566 5.5e-42 174.5 132 71.2
Ca_09758_v3 Cicer arietinum L. HOM05D005096 ORTHO05D006566 5.5e-42 174.5 132 65.9
Actinidia00750 Actinidia chinensis HOM05D005096 ORTHO05D006566 1.2e-41 173.3 131 67.9
AL1G12650 Arabidopsis lyrata HOM05D005096 ORTHO05D006566 1.6e-41 172.9 132 68.9
Peaxi162Scf01607g00116 Petunia axillaris HOM05D005096 ORTHO05D006566 1.6e-41 172.9 130 68.5
A08p37450 Brassica napus HOM05D005096 ORTHO05D006566 2.1e-41 172.6 131 69.5
C08p00440 Brassica napus HOM05D005096 ORTHO05D006566 2.1e-41 172.6 131 69.5
BraA08t35643Z Brassica rapa HOM05D005096 ORTHO05D006566 2.1e-41 172.6 131 69.5
Carub.0001s0230 Capsella rubella HOM05D005096 ORTHO05D006566 2.1e-41 172.6 132 68.9
BolC8t46843H Brassica oleracea HOM05D005096 ORTHO05D006566 2.7e-41 172.2 131 69.5
Glyma.10G026400 Glycine max HOM05D005096 ORTHO05D006566 3.6e-41 171.8 132 67.4
DCAR_002736 Daucus carota HOM05D005096 ORTHO05D006566 4.7e-41 171.4 133 66.9
Medtr1g072270 Medicago truncatula HOM05D005096 ORTHO05D006566 4.7e-41 171.4 132 62.9
AUR62036827 Chenopodium quinoa HOM05D005096 ORTHO05D006566 8.0e-41 170.6 133 63.9
Glyma.02G147400 Glycine max HOM05D005096 ORTHO05D006566 8.0e-41 170.6 132 66.7
TPR.G9125 Trifolium pratense HOM05D005096 ORTHO05D006566 8.0e-41 170.6 132 64.4
Ah.15g091940 Amaranthus hybridus HOM05D005096 ORTHO05D006566 1.4e-40 169.9 133 64.7
Lsat_1_v5_gn_9_3760 Lactuca sativa HOM05D005096 ORTHO05D006566 1.4e-40 169.9 131 63.4
MD11G1311600 Malus domestica HOM05D005096 ORTHO05D006566 1.4e-40 169.9 132 65.9
Phvul.007G172000 Phaseolus vulgaris HOM05D005096 ORTHO05D006566 1.4e-40 169.9 132 65.2
arahy.Tifrunner.gnm1.ann1.VTSW9N Arachis hypogaea HOM05D005096 ORTHO05D006566 2.3e-40 169.1 133 64.7
Lj5g0021757 Lotus japonicus HOM05D005096 ORTHO05D006566 2.3e-40 169.1 132 64.4
CARHR002500 Cardamine hirsuta HOM05D005096 ORTHO05D006566 3.0e-40 168.7 132 68.2
Duzib133G0542 Durio zibethinus HOM05D005096 ORTHO05D006566 3.0e-40 168.7 131 64.9
MD11G1286100 Malus domestica HOM05D005096 ORTHO05D006566 3.0e-40 168.7 132 65.2
Migut.D00294 Erythranthe guttata HOM05D005096 ORTHO05D006566 6.7e-40 167.5 131 67.2
Sc05g0004960 Simmondsia chinensis HOM05D005096 ORTHO05D006566 8.8e-40 167.2 133 63.2
ATR0626G051 Amborella trichopoda HOM05D005096 ORTHO05D006566 1.5e-39 166.4 130 66.2
Hund05342 Selenicereus undatus HOM05D005096 ORTHO05D006566 1.5e-39 166.4 133 62.4
Thhalv10006729m.g Eutrema salsugineum HOM05D005096 ORTHO05D006566 2.0e-39 166.0 131 66.4
Lalb_Chr02g0142781 Lupinus albus HOM05D005096 ORTHO05D006566 2.6e-39 165.6 133 65.4
Thecc.01G279600 Theobroma cacao HOM05D005096 ORTHO05D006566 2.6e-39 165.6 133 64.7
Sed0025205 Sechium edule HOM05D005096 ORTHO05D006566 4.4e-39 164.9 132 65.2
VMungo0720G0024 Vigna mungo HOM05D005096 ORTHO05D006566 7.4e-39 164.1 132 63.6
Ciclev10023868m.g Citrus clementina HOM05D005096 ORTHO05D006566 1.7e-38 162.9 110 74.5
SGA_v2.0_scaffold1G00471 Striga asiatica HOM05D005096 ORTHO05D006566 1.8e-37 159.5 131 63.4
unitig_0.g1141 Utricularia gibba HOM05D005096 ORTHO05D003974 1.8e-37 159.5 131 62.6
CDE06G0317 Ceratophyllum demersum HOM05D005096 ORTHO05D006566 5.3e-37 157.9 128 64.8
Os05g0390100 Oryza sativa ssp. japonica HOM05D005096 ORTHO05D006566 1.3e-35 153.3 131 57.3
Zm00001eb287190 Zea mays HOM05D005096 ORTHO05D006566 1.5e-34 149.8 131 59.5
PSO302G0140 Papaver somniferum HOM05D005096 ORTHO05D006566 2.1e-33 146.0 132 59.8
PSO170G0567 Papaver somniferum HOM05D005096 ORTHO05D006566 2.7e-33 145.6 132 59.1
Sabra02G0043400 Salix brachista HOM05D005096 ORTHO05D006566 3.5e-28 128.6 146 54.1
Mapoly0002s0267 Marchantia polymorpha HOM05D005096 ORTHO05D006566 1.4e-24 116.7 128 46.1
SEGI_13636 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 3.0e-24 115.5 130 50.0
AagrBONN_evm.TU.Sc2ySwM_228.961 Anthoceros agrestis HOM05D005096 ORTHO05D006566 4.0e-24 115.2 128 48.4
Pp3c10_17390 Physcomitrium patens HOM05D005096 ORTHO05D006566 6.8e-24 114.4 126 46.8
Pp3c3_25850 Physcomitrium patens HOM05D005096 ORTHO05D006566 9.8e-23 110.5 127 46.5
MD11G1312200 Malus domestica HOM05D005096 ORTHO05D006566 1.7e-22 109.8 83 66.3
SMO147G0152 Selaginella moellendorffii HOM05D005096 ORTHO05D006566 2.4e-21 105.9 126 46.8
CBR_g4009 Chara braunii HOM05D005096 ORTHO05D006566 1.0e-16 90.5 127 36.2
arahy.Tifrunner.gnm1.ann1.8W9TWR Arachis hypogaea HOM05D005096 ORTHO05D006566 1.1e-10 70.5 60 56.7
SEGI_40401 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.1e-10 70.5 81 50.6
AUR62043139 Chenopodium quinoa HOM05D005096 ORTHO05D006566 1.5e-10 70.1 39 92.3
Hma1.2p1_0536F.1_g174110 Hydrangea macrophylla HOM05D005096 ORTHO05D006214 4.3e-10 68.6 72 54.2
MBI19_g21295_MAGBIO Magnolia biondii HOM05D005096 ORTHO05D006566 4.3e-10 68.6 37 94.6
MD00G1063200 Malus domestica HOM05D005096 ORTHO05D006566 3.6e-09 65.5 42 83.3
Psat6g060000 Pisum sativum HOM05D005096 ORTHO05D006566 1.4e-08 63.5 38 86.8
Hund05341 Selenicereus undatus HOM05D005096 ORTHO05D006566 1.4e-08 63.5 39 84.6
TAR362G0796 Trochodendron aralioides HOM05D005096 ORTHO05D006566 5.2e-08 61.6 36 91.7
SEGI_20229 Sequoiadendron giganteum HOM05D000300 ORTHO05D385648 3.7e-06 55.5 100 37.0


User provided reference genes

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