Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c44142 Carica papaya HOM05D000434 ORTHO05D004273 2.7e-79 298.5 143 100.0
Thecc.05G227400 Theobroma cacao HOM05D000434 ORTHO05D004273 1.8e-51 206.1 126 78.6
Duzib128G0661 Durio zibethinus HOM05D000434 ORTHO05D004273 5.9e-50 201.1 127 78.7
Dinv17235 Davidia involucrata HOM05D000434 ORTHO05D004273 3.8e-49 198.4 127 74.8
COL.COLO4_08409 Corchorus olitorius HOM05D000434 ORTHO05D004273 8.5e-49 197.2 127 76.4
Ciclev10030644m.g Citrus clementina HOM05D000434 ORTHO05D004273 2.1e-47 192.6 127 73.2
Atru.chr12.1812 Acer truncatum HOM05D000434 ORTHO05D004273 1.5e-45 186.4 127 73.2
Gohir.A11G221500 Gossypium hirsutum HOM05D001644 ORTHO05D004273 1.5e-45 186.4 126 73.8
Gohir.D11G234900 Gossypium hirsutum HOM05D000434 ORTHO05D004273 7.5e-45 184.1 127 74.0
Gorai.007G247600 Gossypium raimondii HOM05D000434 ORTHO05D004273 9.8e-45 183.7 127 74.0
Gohir.D13G163000 Gossypium hirsutum HOM05D000434 ORTHO05D004273 1.7e-44 183.0 127 73.2
Haze_00345 Corylus avellana HOM05D000434 ORTHO05D004273 1.1e-43 180.3 127 70.9
Dinv07434 Davidia involucrata HOM05D000434 ORTHO05D004273 1.4e-43 179.9 127 68.5
Gorai.013G185200 Gossypium raimondii HOM05D000434 ORTHO05D004273 7.0e-43 177.6 127 71.7
Gohir.A13G158300 Gossypium hirsutum HOM05D000434 ORTHO05D004273 9.1e-43 177.2 127 71.7
GSVIVG01024260001 Vitis vinifera HOM05D000434 ORTHO05D004273 1.6e-42 176.4 122 68.9
RcHm_v2.0_Chr1g0384621 Rosa chinensis HOM05D000434 ORTHO05D004273 5.9e-42 174.5 124 67.7
TWI60G1125 Tripterygium wilfordii HOM05D000434 ORTHO05D004273 5.9e-42 174.5 130 65.4
Lj3C883G2 Lonicera japonica HOM05D000434 ORTHO05D004273 1.3e-41 173.3 131 67.9
CiPaw.06G037700 Carya illinoinensis HOM05D000434 ORTHO05D004273 1.7e-41 172.9 127 68.5
Manes.09G131000 Manihot esculenta HOM05D000434 ORTHO05D004273 2.3e-41 172.6 127 67.7
Actinidia33805 Actinidia chinensis HOM05D000434 ORTHO05D004273 5.0e-41 171.4 128 68.0
Potri.013G075300 Populus trichocarpa HOM05D000434 ORTHO05D004273 5.0e-41 171.4 127 69.3
Hma1.2p1_0419F.1_g149600 Hydrangea macrophylla HOM05D000434 ORTHO05D004273 1.1e-40 170.2 127 69.3
Manes.08G158900 Manihot esculenta HOM05D000434 ORTHO05D004273 1.9e-40 169.5 127 66.9
MD07G1311600 Malus domestica HOM05D000434 ORTHO05D004273 9.5e-40 167.2 127 66.1
Atru.chr13.64 Acer truncatum HOM05D000434 ORTHO05D004273 1.6e-39 166.4 127 67.7
MD01G1239700 Malus domestica HOM05D000434 ORTHO05D004273 4.7e-39 164.9 127 64.6
FAN03G1317 Fragaria x ananassa HOM05D000434 ORTHO05D004273 6.1e-39 164.5 126 64.3
Prupe.2G329600 Prunus persica HOM05D000434 ORTHO05D004273 6.1e-39 164.5 131 65.6
FvH4_7g34270 Fragaria vesca HOM05D000434 ORTHO05D004273 8.0e-39 164.1 124 64.5
CSS0041140 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D004273 3.0e-38 162.2 130 66.9
MELO3C005386.2 Cucumis melo HOM05D000434 ORTHO05D004273 2.6e-37 159.1 125 63.2
Potri.019G043400 Populus trichocarpa HOM05D000434 ORTHO05D004273 2.2e-36 156.0 127 66.1
CsaV3_5G005670 Cucumis sativus L. HOM05D000434 ORTHO05D004273 2.8e-36 155.6 125 61.6
THA.LOC104821671 Tarenaya hassleriana HOM05D000434 ORTHO05D004273 2.8e-36 155.6 126 60.3
Sed0010122 Sechium edule HOM05D000434 ORTHO05D004273 2.4e-35 152.5 126 61.9
CiPaw.05G210600 Carya illinoinensis HOM05D000434 ORTHO05D004273 4.1e-35 151.8 128 61.7
TAR629G3430 Trochodendron aralioides HOM05D000434 ORTHO05D004273 1.2e-34 150.2 125 59.2
ClCG01G005430 Citrullus lanatus HOM05D000434 ORTHO05D004273 1.6e-34 149.8 126 62.7
Sed0016658 Sechium edule HOM05D000434 ORTHO05D004273 1.6e-34 149.8 127 59.8
vmacro06357 Vaccinium macrocarpon HOM05D000434 ORTHO05D004273 1.6e-34 149.8 125 60.8
Lj4g0020871 Lotus japonicus HOM05D000434 ORTHO05D004273 2.0e-34 149.4 124 60.5
Nn1g09320 Nelumbo nucifera HOM05D000434 ORTHO05D004273 2.7e-34 149.1 128 60.2
DCAR_020436 Daucus carota HOM05D000434 ORTHO05D004273 3.5e-34 148.7 120 59.2
Cfa016111 Carpinus fangiana HOM05D004970 ORTHO05D005665 1.0e-33 147.1 104 69.2
Rhsim03G0225600 Rhododendron simsii HOM05D000434 ORTHO05D004273 5.0e-33 144.8 127 60.6
THA.LOC104805727 Tarenaya hassleriana HOM05D000434 ORTHO05D004273 8.6e-33 144.1 126 56.3
Sabra13G0064800 Salix brachista HOM05D000434 ORTHO05D004273 2.1e-31 139.4 102 68.6
Thhalv10003604m.g Eutrema salsugineum HOM05D000434 ORTHO05D004273 8.0e-31 137.5 126 54.0
PGR142G0113 Punica granatum HOM05D000434 ORTHO05D004273 2.3e-30 136.0 132 56.1
Cc02_g00030 Coffea canephora HOM05D000434 ORTHO05D004273 8.9e-30 134.0 120 59.2
AL7G44910 Arabidopsis lyrata HOM05D000434 ORTHO05D004273 2.6e-29 132.5 127 53.5
CARHR216670 Cardamine hirsuta HOM05D000434 ORTHO05D004273 3.4e-29 132.1 125 55.2
Nn3g19154 Nelumbo nucifera HOM05D000434 ORTHO05D004273 3.4e-29 132.1 127 52.0
Eucgr.K00069 Eucalyptus grandis HOM05D000434 ORTHO05D004273 5.8e-29 131.3 128 51.6
Aa31LG9G17860 Aethionema arabicum HOM05D000434 ORTHO05D004273 2.2e-28 129.4 120 55.0
AT5G35980 Arabidopsis thaliana HOM05D000434 ORTHO05D004273 2.2e-28 129.4 127 52.0
ECA232G4531 Erigeron canadensis HOM05D000434 ORTHO05D004273 2.9e-28 129.0 127 56.7
Lalb_Chr09g0334671 Lupinus albus HOM05D000434 ORTHO05D004273 4.1e-27 125.2 129 52.7
FAN10G0514 Fragaria x ananassa HOM05D000434 ORTHO05D004273 5.4e-27 124.8 101 62.4
Carub.0007s3176 Capsella rubella HOM05D000434 ORTHO05D004273 7.0e-27 124.4 128 50.8
Sc13g0011040 Simmondsia chinensis HOM05D000434 ORTHO05D004273 7.0e-27 124.4 127 49.6
Glyma.08G266300 Glycine max HOM05D000434 ORTHO05D004273 1.2e-26 123.6 128 50.8
Glyma.16G101500 Glycine max HOM05D000434 ORTHO05D004273 1.2e-26 123.6 128 50.8
arahy.Tifrunner.gnm1.ann1.R5L11J Arachis hypogaea HOM05D000434 ORTHO05D004273 1.6e-26 123.2 119 55.5
arahy.Tifrunner.gnm1.ann1.Y5NR52 Arachis hypogaea HOM05D000434 ORTHO05D004273 1.6e-26 123.2 119 55.5
Sp7g06110 Schrenkiella parvula HOM05D000434 ORTHO05D004273 2.7e-26 122.5 123 52.8
Aqoxy6G02174 Aquilegia oxysepala HOM05D000434 ORTHO05D004273 4.6e-26 121.7 122 50.0
Phvul.003G275500 Phaseolus vulgaris HOM05D000434 ORTHO05D004273 6.0e-26 121.3 128 49.2
Lsat_1_v5_gn_9_47961 Lactuca sativa HOM05D000434 ORTHO05D004273 7.8e-26 120.9 124 56.5
EL10Ac3g05039 Beta vulgaris HOM05D000434 ORTHO05D004273 3.9e-25 118.6 128 50.8
CANSAT21G2065 Cannabis sativa HOM05D000434 ORTHO05D004273 3.9e-25 118.6 127 53.5
Sabra19G0054100 Salix brachista HOM05D000434 ORTHO05D004273 3.9e-25 118.6 127 53.5
Medtr8g070930 Medicago truncatula HOM05D000434 ORTHO05D004273 5.0e-25 118.2 128 50.8
BcaB06g27005 Brassica carinata HOM05D000434 ORTHO05D004273 6.6e-25 117.9 122 54.1
Lalb_Chr05g0228931 Lupinus albus HOM05D000434 ORTHO05D004273 8.6e-25 117.5 131 51.9
Psat4g111280 Pisum sativum HOM05D000434 ORTHO05D004273 1.1e-24 117.1 128 50.0
TPR.G6121 Trifolium pratense HOM05D000434 ORTHO05D004273 1.1e-24 117.1 128 51.6
BraA04t16669Z Brassica rapa HOM05D000434 ORTHO05D004273 1.5e-24 116.7 128 51.6
HanXRQChr16g0512161 Helianthus annuus HOM05D000434 ORTHO05D004273 1.5e-24 116.7 127 52.0
BcaC02g09507 Brassica carinata HOM05D000434 ORTHO05D004273 1.9e-24 116.3 122 53.3
BolC4t25934H Brassica oleracea HOM05D000434 ORTHO05D004273 1.9e-24 116.3 122 53.3
VMungo0251G3292 Vigna mungo HOM05D000434 ORTHO05D004273 1.2e-23 113.6 122 49.2
PSO782G3487 Papaver somniferum HOM05D000434 ORTHO05D004273 2.8e-23 112.5 123 50.4
PSO063G7071 Papaver somniferum HOM05D000434 ORTHO05D004273 3.6e-23 112.1 123 50.4
Nitab4.5_0000021g0920 Nicotiana tabacum HOM05D000434 ORTHO05D004273 8.0e-23 110.9 127 45.7
BcaC08g44318 Brassica carinata HOM05D000434 ORTHO05D004273 1.1e-22 110.5 123 50.4
BolC6t36936H Brassica oleracea HOM05D000434 ORTHO05D004273 1.1e-22 110.5 123 50.4
Oeu028992.1 Olea europaea HOM05D000434 ORTHO05D004273 1.1e-22 110.5 127 52.0
Hund09813 Selenicereus undatus HOM05D000434 ORTHO05D004273 1.4e-22 110.2 126 46.8
BcaB02g08046 Brassica carinata HOM05D000434 ORTHO05D004273 1.8e-22 109.8 123 50.4
PSO782G1177 Papaver somniferum HOM05D000434 ORTHO05D004273 1.8e-22 109.8 123 50.4
A05p16450 Brassica napus HOM05D000434 ORTHO05D004273 6.8e-22 107.8 123 49.6
PGSC0003DMG400026492 Solanum tuberosum HOM05D000434 ORTHO05D004273 6.8e-22 107.8 128 49.2
Nitab4.5_0005545g0040 Nicotiana tabacum HOM05D000434 ORTHO05D004273 8.9e-22 107.5 127 46.5
Peaxi162Scf00516g00432 Petunia axillaris HOM05D000434 ORTHO05D004273 2.0e-21 106.3 121 47.1
CAN.G732.30 Capsicum annuum HOM05D000434 ORTHO05D004273 2.6e-21 105.9 125 50.4
BraA05t20550Z Brassica rapa HOM05D000434 ORTHO05D004273 4.4e-21 105.1 119 49.6
Sopen03g028110 Solanum pennellii HOM05D000434 ORTHO05D004273 4.4e-21 105.1 128 48.4
Aa31LG2G2100 Aethionema arabicum HOM05D000434 ORTHO05D004273 9.8e-21 104.0 128 46.1
Solyc03g097350.4 Solanum lycopersicum HOM05D000434 ORTHO05D004273 1.3e-20 103.6 128 48.4
Ca_26089_v3 Cicer arietinum L. HOM05D000434 ORTHO05D004273 4.9e-20 101.7 112 50.9
TWI34G0496 Tripterygium wilfordii HOM05D000434 ORTHO05D004273 4.1e-19 98.6 88 58.0
C06p17410 Brassica napus HOM05D000434 ORTHO05D004273 3.5e-18 95.5 97 51.5
A04p10070 Brassica napus HOM05D000434 ORTHO05D004273 7.8e-18 94.4 101 51.5
C04p43540 Brassica napus HOM05D000434 ORTHO05D004273 1.0e-17 94.0 95 53.7
ATR0568G029 Amborella trichopoda HOM05D000434 ORTHO05D004273 1.6e-15 86.7 129 39.5
TAR636G0662 Trochodendron aralioides HOM05D000434 ORTHO05D004273 2.1e-15 86.3 124 42.7
Actinidia04556 Actinidia chinensis HOM05D000434 ORTHO05D004273 3.4e-13 79.0 63 66.7
Ah.04g156120 Amaranthus hybridus HOM05D000434 ORTHO05D004273 7.8e-10 67.8 122 41.0
AUR62002097 Chenopodium quinoa HOM05D000434 ORTHO05D004273 3.0e-09 65.9 102 37.3
AUR62028215 Chenopodium quinoa HOM05D000434 ORTHO05D004273 3.0e-09 65.9 102 36.3
SalBow1G4855 Salvia bowleyana HOM05D000434 ORTHO05D004273 1.1e-08 63.9 127 37.0
HPP92_014380 Vanilla planifolia HOM05D000434 ORTHO05D004273 8.1e-07 57.8 140 32.1
HPP92_027561 Vanilla planifolia HOM05D000434 ORTHO05D004273 8.1e-07 57.8 140 32.1
CDE02G1949 Ceratophyllum demersum HOM05D000434 ORTHO05D004273 1.1e-06 57.4 129 33.3


User provided reference genes

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