Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c42793 Carica papaya HOM05D002793 ORTHO05D002965 1.1e-65 253.1 120 100.0
Potri.001G327500 Populus trichocarpa HOM05D002793 ORTHO05D002965 2.0e-19 99.4 93 50.5
Atru.chr6.2594 Acer truncatum HOM05D002793 ORTHO05D002965 2.2e-18 95.9 93 53.8
Sabra16G0209700 Salix brachista HOM05D002793 ORTHO05D002965 3.2e-17 92.0 93 47.3
Dinv33324 Davidia involucrata HOM05D002793 ORTHO05D002965 3.0e-15 85.5 116 47.4
Thecc.04G040100 Theobroma cacao HOM05D002793 ORTHO05D002965 5.2e-15 84.7 96 53.1
Haze_14896 Corylus avellana HOM05D002793 ORTHO05D002965 1.5e-14 83.2 93 49.5
COL.COLO4_13290 Corchorus olitorius HOM05D002793 ORTHO05D002965 5.7e-14 81.3 97 46.4
FAN05G3862 Fragaria x ananassa HOM05D002793 ORTHO05D002965 7.5e-14 80.9 97 49.5
FAN09G2893 Fragaria x ananassa HOM05D002793 ORTHO05D002965 2.2e-13 79.3 97 48.5
Dinv25648 Davidia involucrata HOM05D002793 ORTHO05D002965 3.7e-13 78.6 94 50.0
FvH4_6g53810 Fragaria vesca HOM05D002793 ORTHO05D002965 8.3e-13 77.4 97 47.4
FAN14G3673 Fragaria x ananassa HOM05D002793 ORTHO05D002965 8.3e-13 77.4 97 47.4
Manes.11G086900 Manihot esculenta HOM05D002793 ORTHO05D002965 1.4e-12 76.6 93 45.2
Duzib147G0228 Durio zibethinus HOM05D002793 ORTHO05D002965 1.8e-12 76.3 99 45.5
FAN02G2297 Fragaria x ananassa HOM05D002793 ORTHO05D002965 4.1e-12 75.1 97 47.4
Prupe.3G308500 Prunus persica HOM05D002793 ORTHO05D002965 5.4e-12 74.7 97 44.3
QL03p051728 Quercus lobata HOM05D002793 ORTHO05D002965 2.7e-11 72.4 96 43.8
CiPaw.03G057900 Carya illinoinensis HOM05D002793 ORTHO05D002965 2.3e-10 69.3 93 43.0
Ciclev10018081m.g Citrus clementina HOM05D002793 ORTHO05D002965 2.9e-10 68.9 94 48.9
Manes.04G088700 Manihot esculenta HOM05D002793 ORTHO05D002965 3.8e-10 68.6 95 44.2
TAR629G0254 Trochodendron aralioides HOM05D002793 ORTHO05D002965 5.0e-10 68.2 95 38.9
Nn3g16401 Nelumbo nucifera HOM05D002793 ORTHO05D002965 3.3e-09 65.5 95 41.1
Actinidia08054 Actinidia chinensis HOM05D002793 ORTHO05D002965 4.2e-09 65.1 93 43.0
CSS0006370 Camellia sinensis var. sinensis HOM05D002793 ORTHO05D002965 7.2e-09 64.3 96 36.5
MD17G1002300 Malus domestica HOM05D002793 ORTHO05D002965 7.2e-09 64.3 97 43.3
CSS0004091 Camellia sinensis var. sinensis HOM05D002793 ORTHO05D002965 9.5e-09 63.9 94 41.5
TWI60G1054 Tripterygium wilfordii HOM05D002793 ORTHO05D002965 9.5e-09 63.9 94 44.7
Actinidia30867 Actinidia chinensis HOM05D002793 ORTHO05D002965 1.2e-08 63.5 94 42.6
Haze_12447 Corylus avellana HOM05D002793 ORTHO05D002965 1.2e-08 63.5 96 41.7
CSS0011475 Camellia sinensis var. sinensis HOM05D002793 ORTHO05D002965 2.1e-08 62.8 94 39.4
CSS0013139 Camellia sinensis var. sinensis HOM05D002793 ORTHO05D002965 2.1e-08 62.8 95 40.0
CSS0031398 Camellia sinensis var. sinensis HOM05D002793 ORTHO05D002965 2.1e-08 62.8 95 40.0
Dinv11689 Davidia involucrata HOM05D002793 ORTHO05D002965 2.1e-08 62.8 94 39.4
CSS0019194 Camellia sinensis var. sinensis HOM05D002793 ORTHO05D002965 3.6e-08 62.0 96 36.5
Medtr7g028350 Medicago truncatula HOM05D002793 ORTHO05D002965 6.1e-08 61.2 96 41.7
Rhsim08G0041700 Rhododendron simsii HOM05D002793 ORTHO05D002965 1.0e-07 60.5 94 40.4
Gohir.D10G079500 Gossypium hirsutum HOM05D002793 ORTHO05D002965 1.4e-07 60.1 99 39.4
Sed0007037 Sechium edule HOM05D002793 ORTHO05D002965 1.8e-07 59.7 94 38.3
arahy.Tifrunner.gnm1.ann1.QV3UQR Arachis hypogaea HOM05D002793 ORTHO05D002965 3.0e-07 58.9 96 38.5
arahy.Tifrunner.gnm1.ann1.ZG4VZM Arachis hypogaea HOM05D002793 ORTHO05D002965 3.0e-07 58.9 122 34.4
CiPaw.06G105000 Carya illinoinensis HOM05D002793 ORTHO05D002965 5.2e-07 58.2 100 38.0
THA.LOC104821129 Tarenaya hassleriana HOM05D002793 ORTHO05D002965 5.2e-07 58.2 105 40.0
Gorai.011G086600 Gossypium raimondii HOM05D002793 ORTHO05D002965 6.8e-07 57.8 99 39.4
CANSAT64G0260 Cannabis sativa HOM05D002793 ORTHO05D002965 8.9e-07 57.4 94 37.2
Hma1.2p1_0065F.1_g035100 Hydrangea macrophylla HOM05D002793 ORTHO05D002965 2.0e-06 56.2 95 34.7
Prupe.1G222800 Prunus persica HOM05D002793 ORTHO05D002965 2.0e-06 56.2 97 36.1
GSVIVG01010528001 Vitis vinifera HOM05D002793 ORTHO05D002965 3.4e-06 55.5 96 38.5
Gohir.A10G071500 Gossypium hirsutum HOM05D002793 ORTHO05D002965 4.4e-06 55.1 99 39.4
Cc11_g17200 Coffea canephora HOM05D002793 ORTHO05D002965 7.5e-06 54.3 98 34.7
Lalb_Chr02g0144551 Lupinus albus HOM05D002793 ORTHO05D002965 7.5e-06 54.3 99 34.3
Actinidia39798 Actinidia chinensis HOM05D002793 ORTHO05D002965 9.8e-06 53.9 98 34.7
Aqoxy5G03293 Aquilegia oxysepala HOM05D002793 ORTHO05D002965 9.8e-06 53.9 96 33.3


User provided reference genes

Program Settings