Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c42681 Carica papaya HOM05D000462 ORTHO05D005846 1.1e-55 219.5 101 100.0
Cpa.g.sc73.65 Carica papaya HOM05D000462 ORTHO05D005846 1.5e-20 102.8 69 66.7
Hund26858 Selenicereus undatus HOM05D000462 ORTHO05D005846 2.0e-12 75.9 64 51.6
Atru.chr2.1657 Acer truncatum HOM05D000462 ORTHO05D005846 7.7e-12 73.9 63 50.8
PGR042G2077 Punica granatum HOM05D000462 ORTHO05D005846 1.0e-11 73.6 67 49.3
Nn3g19412 Nelumbo nucifera HOM05D000462 ORTHO05D005846 1.7e-11 72.8 67 46.3
Nn3g19417 Nelumbo nucifera HOM05D000462 ORTHO05D005846 1.7e-11 72.8 67 46.3
TAR374G1078 Trochodendron aralioides HOM05D000462 ORTHO05D005846 1.7e-11 72.8 70 45.7
Actinidia21593 Actinidia chinensis HOM05D000462 ORTHO05D005846 2.2e-11 72.4 63 50.8
Ciclev10033936m.g Citrus clementina HOM05D000462 ORTHO05D005846 6.5e-11 70.9 65 53.8
CANSAT78G2521 Cannabis sativa HOM05D000462 ORTHO05D005846 1.1e-10 70.1 67 47.8
FvH4_6g35581 Fragaria vesca HOM05D000462 ORTHO05D005846 1.5e-10 69.7 63 50.8
FAN14G3081 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.5e-10 69.7 63 50.8
CSS0023532 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 1.9e-10 69.3 65 53.8
Psat7g132920 Pisum sativum HOM05D000462 ORTHO05D005846 1.9e-10 69.3 67 49.3
RcHm_v2.0_Chr2g0147401 Rosa chinensis HOM05D000462 ORTHO05D005846 1.9e-10 69.3 64 50.0
GSVIVG01019293001 Vitis vinifera HOM05D000462 ORTHO05D005846 1.9e-10 69.3 65 49.2
Haze_03590 Corylus avellana HOM05D000462 ORTHO05D005846 2.5e-10 68.9 65 47.7
MD07G1080300 Malus domestica HOM05D000462 ORTHO05D005846 4.2e-10 68.2 65 53.8
Hma1.2p1_0353F.1_g133250 Hydrangea macrophylla HOM05D000462 ORTHO05D005846 5.5e-10 67.8 63 46.0
Dinv43525 Davidia involucrata HOM05D000462 ORTHO05D005846 7.2e-10 67.4 63 49.2
Aqoxy3G02219 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 9.4e-10 67.0 65 49.2
Aqoxy7G00268 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 9.4e-10 67.0 65 46.2
Sc02g0004850 Simmondsia chinensis HOM05D000462 ORTHO05D005846 1.2e-09 66.6 67 47.8
Prupe.2G104700 Prunus persica HOM05D000462 ORTHO05D005846 1.6e-09 66.2 65 50.8
Prupe.2G100300 Prunus persica HOM05D000462 ORTHO05D005846 2.1e-09 65.9 65 50.8
CSS0047566 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 2.7e-09 65.5 75 41.3
EL10Ac4g07924 Beta vulgaris HOM05D000462 ORTHO05D005846 4.7e-09 64.7 66 43.9
EL10Ac4g07923 Beta vulgaris HOM05D000462 ORTHO05D005846 8.0e-09 63.9 64 46.9
RcHm_v2.0_Chr1g0342371 Rosa chinensis HOM05D000462 ORTHO05D005846 8.0e-09 63.9 64 48.4
Eucgr.E01753 Eucalyptus grandis HOM05D000462 ORTHO05D005846 1.0e-08 63.5 63 46.0
MD02G1233300 Malus domestica HOM05D000462 ORTHO05D005846 1.0e-08 63.5 65 50.8
CSS0030224 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 1.8e-08 62.8 75 40.0
Cfa010675 Carpinus fangiana HOM05D000462 ORTHO05D005846 1.8e-08 62.8 65 44.6
AUR62020518 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.8e-08 62.8 63 47.6
Glyma.07G224100 Glycine max HOM05D000462 ORTHO05D005846 2.3e-08 62.4 67 43.3
Nitab4.5_0003123g0040 Nicotiana tabacum HOM05D000462 ORTHO05D011162 2.3e-08 62.4 75 41.3
PSO063G2746 Papaver somniferum HOM05D000462 ORTHO05D005846 3.0e-08 62.0 61 45.9
Rhsim07G0047100 Rhododendron simsii HOM05D000462 ORTHO05D005846 3.0e-08 62.0 65 46.2
Sed0002685 Sechium edule HOM05D000462 ORTHO05D005846 3.0e-08 62.0 66 50.0
CiPaw.13G054400 Carya illinoinensis HOM05D000462 ORTHO05D005846 4.0e-08 61.6 66 43.9
AUR62031619 Chenopodium quinoa HOM05D000462 ORTHO05D005846 4.0e-08 61.6 62 50.0
FvH4_7g07720 Fragaria vesca HOM05D000462 ORTHO05D005846 4.0e-08 61.6 65 44.6
FAN06G2574 Fragaria x ananassa HOM05D000462 ORTHO05D005846 4.0e-08 61.6 65 44.6
ClCG05G002510 Citrullus lanatus HOM05D000462 ORTHO05D005846 5.2e-08 61.2 65 44.6
FAN03G2319 Fragaria x ananassa HOM05D000462 ORTHO05D005846 5.2e-08 61.2 65 43.1
Rhsim07G0047200 Rhododendron simsii HOM05D000462 ORTHO05D005846 5.2e-08 61.2 68 44.1
PSO782G4146 Papaver somniferum HOM05D000462 ORTHO05D005846 6.7e-08 60.8 62 45.2
TPR.G34026 Trifolium pratense HOM05D000462 ORTHO05D005846 6.7e-08 60.8 68 44.1
Cc00_g12640 Coffea canephora HOM05D000462 ORTHO05D005846 1.1e-07 60.1 65 40.0
Cc08_g05580 Coffea canephora HOM05D000462 ORTHO05D005846 1.1e-07 60.1 65 43.1
RcHm_v2.0_Chr2g0147411 Rosa chinensis HOM05D000462 ORTHO05D005846 1.5e-07 59.7 64 50.0
FAN10G1386 Fragaria x ananassa HOM05D000462 ORTHO05D005846 2.0e-07 59.3 65 44.6
Medtr4g083390 Medicago truncatula HOM05D000462 ORTHO05D005846 2.0e-07 59.3 67 44.8
PSO017G2480 Papaver somniferum HOM05D000462 ORTHO05D005846 2.0e-07 59.3 65 40.0
AUR62015684 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.6e-07 58.9 64 45.3
AUR62031622 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.6e-07 58.9 66 45.5
Migut.N01673 Erythranthe guttata HOM05D000462 ORTHO05D005846 2.6e-07 58.9 68 45.6
Cc08_g05570 Coffea canephora HOM05D000462 ORTHO05D005846 3.3e-07 58.5 95 34.7
Nitab4.5_0000792g0060 Nicotiana tabacum HOM05D000462 ORTHO05D005846 3.3e-07 58.5 63 46.0
PSO478G1321 Papaver somniferum HOM05D000462 ORTHO05D005846 3.3e-07 58.5 64 40.6
Lsat_1_v5_gn_7_33120 Lactuca sativa HOM05D000462 ORTHO05D005846 4.4e-07 58.2 67 37.3
Aqoxy3G00515 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 5.7e-07 57.8 66 43.9
arahy.Tifrunner.gnm1.ann1.L6NMZX Arachis hypogaea HOM05D000462 ORTHO05D005846 5.7e-07 57.8 66 42.4
AUR62015689 Chenopodium quinoa HOM05D000462 ORTHO05D005846 5.7e-07 57.8 62 46.8
arahy.Tifrunner.gnm1.ann1.62DZ2D Arachis hypogaea HOM05D000462 ORTHO05D005846 7.5e-07 57.4 66 42.4
arahy.Tifrunner.gnm1.ann1.ES60GW Arachis hypogaea HOM05D000462 ORTHO05D005846 7.5e-07 57.4 67 46.3
AUR62020515 Chenopodium quinoa HOM05D000462 ORTHO05D005846 7.5e-07 57.4 66 43.9
Ca_18787_v3 Cicer arietinum L. HOM05D000462 ORTHO05D005846 7.5e-07 57.4 70 44.3
MELO3C006216.2 Cucumis melo HOM05D000462 ORTHO05D005846 7.5e-07 57.4 65 41.5
FAN14G2914 Fragaria x ananassa HOM05D000462 ORTHO05D005846 7.5e-07 57.4 63 44.4
Prupe.2G104300 Prunus persica HOM05D000462 ORTHO05D005846 7.5e-07 57.4 65 44.6
DCAR_029566 Daucus carota HOM05D000462 ORTHO05D005846 9.7e-07 57.0 65 41.5
unitig_26.g8840 Utricularia gibba HOM05D000462 ORTHO05D005846 9.7e-07 57.0 63 41.3
VMungo0251G1006 Vigna mungo HOM05D000462 ORTHO05D005846 9.7e-07 57.0 66 43.9
arahy.Tifrunner.gnm1.ann1.AX2FME Arachis hypogaea HOM05D000462 ORTHO05D005846 1.3e-06 56.6 66 42.4
SalBow4G2827 Salvia bowleyana HOM05D000462 ORTHO05D005846 1.3e-06 56.6 66 39.4
MSTRG.17069 Avicennia marina HOM05D000462 ORTHO05D005846 1.7e-06 56.2 63 41.3
Phvul.002G100800 Phaseolus vulgaris HOM05D000462 ORTHO05D005846 1.7e-06 56.2 58 44.8
RcHm_v2.0_Chr1g0342401 Rosa chinensis HOM05D000462 ORTHO05D005846 1.7e-06 56.2 63 49.2
RcHm_v2.0_Chr1g0342511 Rosa chinensis HOM05D000462 ORTHO05D005846 1.7e-06 56.2 63 49.2
arahy.Tifrunner.gnm1.ann1.XCU387 Arachis hypogaea HOM05D000462 ORTHO05D005846 2.2e-06 55.8 67 44.8
CsaV3_3G009950 Cucumis sativus L. HOM05D000462 ORTHO05D005846 2.2e-06 55.8 65 41.5
FvH4_6g35582 Fragaria vesca HOM05D000462 ORTHO05D005846 2.2e-06 55.8 63 42.9
CAN.G206.135 Capsicum annuum HOM05D000462 ORTHO05D005846 2.8e-06 55.5 63 42.9
FAN06G0093 Fragaria x ananassa HOM05D000462 ORTHO05D005846 2.8e-06 55.5 82 43.9
SalBow4G0191 Salvia bowleyana HOM05D009568 ORTHO05D011026 2.8e-06 55.5 64 39.1
CDE03G0429 Ceratophyllum demersum HOM05D000462 ORTHO05D005846 3.7e-06 55.1 64 35.9
Cc08_g05560 Coffea canephora HOM05D000462 ORTHO05D005846 3.7e-06 55.1 94 35.1
vmacro13593 Vaccinium macrocarpon HOM05D000462 ORTHO05D005846 3.7e-06 55.1 65 44.6
AUR62020516 Chenopodium quinoa HOM05D000462 ORTHO05D005846 4.8e-06 54.7 71 40.8
Migut.N01672 Erythranthe guttata HOM05D000462 ORTHO05D005846 4.8e-06 54.7 65 40.0
Nitab4.5_0006461g0020 Nicotiana tabacum HOM05D000462 ORTHO05D005846 4.8e-06 54.7 60 45.0
SalBow4G2124 Salvia bowleyana HOM05D000462 ORTHO05D005846 4.8e-06 54.7 66 37.9
ClCG05G011530 Citrullus lanatus HOM05D000462 ORTHO05D005846 6.3e-06 54.3 63 41.3
CAN.G992.17 Capsicum annuum HOM05D000462 ORTHO05D005846 8.2e-06 53.9 67 40.3
Migut.N01674 Erythranthe guttata HOM05D000462 ORTHO05D005846 8.2e-06 53.9 66 45.5


User provided reference genes

Program Settings