Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c41331 Carica papaya HOM05D000455 ORTHO05D000434 2.8e-85 318.5 157 100.0
Manes.01G053000 Manihot esculenta HOM05D000455 ORTHO05D000434 5.3e-44 181.4 143 65.7
Manes.02G006700 Manihot esculenta HOM05D000455 ORTHO05D000434 1.2e-43 180.3 153 60.8
Gohir.D08G124900 Gossypium hirsutum HOM05D000455 ORTHO05D000434 1.0e-39 167.2 165 58.2
Gorai.004G131700 Gossypium raimondii HOM05D000455 ORTHO05D000434 1.0e-39 167.2 165 58.2
Thecc.03G302500 Theobroma cacao HOM05D000455 ORTHO05D000434 1.8e-39 166.4 164 57.3
PGR042G3480 Punica granatum HOM05D000455 ORTHO05D000434 2.0e-38 162.9 158 59.5
COL.COLO4_10746 Corchorus olitorius HOM05D000455 ORTHO05D000434 3.3e-38 162.2 173 54.9
Atru.chr9.1944 Acer truncatum HOM05D000455 ORTHO05D000434 3.7e-37 158.7 151 57.6
Carub.0007s1707 Capsella rubella HOM05D000455 ORTHO05D000434 1.4e-36 156.8 176 52.8
THA.LOC104815171 Tarenaya hassleriana HOM05D000455 ORTHO05D000434 4.1e-36 155.2 168 53.0
THA.LOC104813049 Tarenaya hassleriana HOM05D000455 ORTHO05D000434 5.3e-36 154.8 152 54.6
Potri.003G143000 Populus trichocarpa HOM05D000455 ORTHO05D000434 1.6e-35 153.3 139 59.0
Gorai.006G206500 Gossypium raimondii HOM05D000455 ORTHO05D000434 2.0e-35 152.9 166 51.8
A01p15300 Brassica napus HOM05D000455 ORTHO05D000434 3.5e-35 152.1 172 53.5
BraA01t01473Z Brassica rapa HOM05D000455 ORTHO05D000434 3.5e-35 152.1 172 53.5
BcaC09g50921 Brassica carinata HOM05D000455 ORTHO05D000434 4.5e-35 151.8 172 54.1
C01p19230 Brassica napus HOM05D000455 ORTHO05D000434 4.5e-35 151.8 172 54.1
BolC1t01849H Brassica oleracea HOM05D000455 ORTHO05D000434 4.5e-35 151.8 172 54.1
THA.LOC104806445 Tarenaya hassleriana HOM05D000455 ORTHO05D000434 4.5e-35 151.8 172 51.7
Gohir.D09G184100 Gossypium hirsutum HOM05D000455 ORTHO05D000434 1.3e-34 150.2 166 51.2
A03p54920 Brassica napus HOM05D000455 ORTHO05D000434 1.7e-34 149.8 172 51.7
BraA03t14557Z Brassica rapa HOM05D000455 ORTHO05D000434 2.2e-34 149.4 172 51.7
AL7G29270 Arabidopsis lyrata HOM05D000455 ORTHO05D000434 3.8e-34 148.7 173 50.3
BolC7t45825H Brassica oleracea HOM05D000455 ORTHO05D000434 6.5e-34 147.9 177 52.0
Sabra03G0103600 Salix brachista HOM05D000455 ORTHO05D000434 6.5e-34 147.9 139 59.7
Sp7g21990 Schrenkiella parvula HOM05D000455 ORTHO05D000434 1.9e-33 146.4 148 56.1
Gorai.003G074300 Gossypium raimondii HOM05D000455 ORTHO05D000434 4.2e-33 145.2 169 51.5
BcaNung05695 Brassica carinata HOM05D000455 ORTHO05D000434 5.5e-33 144.8 173 50.9
Gohir.A02G095700 Gossypium hirsutum HOM05D000455 ORTHO05D000434 7.2e-33 144.4 169 52.1
Gohir.D03G087700 Gossypium hirsutum HOM05D000455 ORTHO05D000434 1.2e-32 143.7 169 50.9
CARHR231430 Cardamine hirsuta HOM05D000455 ORTHO05D000434 1.6e-32 143.3 176 50.6
GSVIVG01019600001 Vitis vinifera HOM05D000455 ORTHO05D000434 1.6e-32 143.3 144 55.6
COL.COLO4_10745 Corchorus olitorius HOM05D000455 ORTHO05D000434 2.1e-32 142.9 168 52.4
THA.LOC104809320 Tarenaya hassleriana HOM05D000455 ORTHO05D000434 1.5e-30 136.7 139 53.2
Duzib205G1505 Durio zibethinus HOM05D000455 ORTHO05D000434 5.7e-30 134.8 167 49.7
Sabra01G0064300 Salix brachista HOM05D000455 ORTHO05D000434 1.4e-28 130.2 141 55.3
Actinidia22738 Actinidia chinensis HOM05D000455 ORTHO05D000434 7.0e-28 127.9 147 51.0
Prupe.5G125000 Prunus persica HOM05D000455 ORTHO05D000434 1.6e-27 126.7 167 47.3
Dinv37495 Davidia involucrata HOM05D002718 ORTHO05D003269 2.7e-27 125.9 166 46.4
Actinidia27304 Actinidia chinensis HOM05D000455 ORTHO05D000434 7.7e-27 124.4 157 50.3
Aa31LG2G1520 Aethionema arabicum HOM05D000455 ORTHO05D000434 2.2e-26 122.9 142 47.9
Dinv38810 Davidia involucrata HOM05D000455 ORTHO05D000434 3.8e-26 122.1 136 51.5
Phvul.007G071900 Phaseolus vulgaris HOM05D000455 ORTHO05D000434 5.0e-26 121.7 150 52.0
CANSAT21G1092 Cannabis sativa HOM05D000455 ORTHO05D000434 8.5e-26 120.9 173 43.9
Lj5g0025579 Lotus japonicus HOM05D000455 ORTHO05D000434 8.5e-26 120.9 149 49.7
TAR629G0003 Trochodendron aralioides HOM05D000455 ORTHO05D000434 1.9e-25 119.8 180 46.1
Sp2g00220 Schrenkiella parvula HOM05D000455 ORTHO05D000434 3.2e-25 119.0 140 49.3
VMungo0720G0806 Vigna mungo HOM05D000455 ORTHO05D000434 4.2e-25 118.6 149 51.0
AL2G10270 Arabidopsis lyrata HOM05D000455 ORTHO05D000434 5.5e-25 118.2 140 47.1
Ciclev10018744m.g Citrus clementina HOM05D000455 ORTHO05D000434 5.5e-25 118.2 116 57.8
Psat6g197400 Pisum sativum HOM05D000455 ORTHO05D000434 1.2e-24 117.1 160 47.5
Carub.0002s0022 Capsella rubella HOM05D000455 ORTHO05D000434 1.6e-24 116.7 141 46.8
SGA_v2.0_scaffold256G45638 Striga asiatica HOM05D000455 ORTHO05D000434 2.1e-24 116.3 159 44.7
Migut.E00644 Erythranthe guttata HOM05D000455 ORTHO05D000434 3.6e-24 115.5 153 43.1
Cc08_g16400 Coffea canephora HOM05D000455 ORTHO05D000434 4.7e-24 115.2 150 47.3
AT1G64530 Arabidopsis thaliana HOM05D000455 ORTHO05D000434 6.1e-24 114.8 140 47.1
Thhalv10023271m.g Eutrema salsugineum HOM05D000455 ORTHO05D000434 6.1e-24 114.8 141 48.9
RcHm_v2.0_Chr7g0186181 Rosa chinensis HOM05D000455 ORTHO05D000434 6.1e-24 114.8 157 43.9
FvH4_5g11570 Fragaria vesca HOM05D000455 ORTHO05D000434 1.0e-23 114.0 161 47.2
MSTRG.13735 Avicennia marina HOM05D000455 ORTHO05D000434 1.8e-23 113.2 145 50.3
CsaV3_4G006840 Cucumis sativus L. HOM05D000455 ORTHO05D000434 1.8e-23 113.2 157 47.8
FAN18G2525 Fragaria x ananassa HOM05D000455 ORTHO05D000434 1.8e-23 113.2 159 47.8
Hma1.2p1_0440F.1_g153600 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 1.8e-23 113.2 139 50.4
MD14G1133200 Malus domestica HOM05D000455 ORTHO05D000434 1.8e-23 113.2 155 44.5
arahy.Tifrunner.gnm1.ann1.LH2L98 Arachis hypogaea HOM05D000455 ORTHO05D000434 2.3e-23 112.8 140 48.6
Medtr1g100970 Medicago truncatula HOM05D000455 ORTHO05D000434 2.3e-23 112.8 166 45.8
Glyma.09G137000 Glycine max HOM05D000455 ORTHO05D000434 3.0e-23 112.5 149 47.0
Hma1.2p1_0359F.1_g135010 Hydrangea macrophylla HOM05D000455 ORTHO05D000434 4.0e-23 112.1 155 46.5
arahy.Tifrunner.gnm1.ann1.0FWB0U Arachis hypogaea HOM05D000455 ORTHO05D000434 5.2e-23 111.7 140 47.9
FAN13G2452 Fragaria x ananassa HOM05D000455 ORTHO05D000434 5.2e-23 111.7 160 45.0
MELO3C016260.2 Cucumis melo HOM05D000455 ORTHO05D000434 6.8e-23 111.3 157 47.1
Oeu041395.2 Olea europaea HOM05D000455 ORTHO05D000434 1.2e-22 110.5 143 46.9
Oeu041396.1 Olea europaea HOM05D000455 ORTHO05D000434 1.2e-22 110.5 143 46.9
VMungo0464G0631 Vigna mungo HOM05D000455 ORTHO05D000434 1.2e-22 110.5 149 46.3
Eucgr.C01653 Eucalyptus grandis HOM05D000455 ORTHO05D000434 3.4e-22 109.0 141 51.8
MBI06_g44138_MAGBIO Magnolia biondii HOM05D000455 ORTHO05D000434 3.4e-22 109.0 158 44.3
TPR.G26977 Trifolium pratense HOM05D000455 ORTHO05D000434 3.4e-22 109.0 160 45.6
Ca_10746_v3 Cicer arietinum L. HOM05D000455 ORTHO05D000434 4.4e-22 108.6 137 50.4
Eucgr.E02033 Eucalyptus grandis HOM05D000455 ORTHO05D000434 4.4e-22 108.6 155 49.0
Oeu009983.1 Olea europaea HOM05D000455 ORTHO05D000434 5.7e-22 108.2 141 49.6
Oeu038539.1 Olea europaea HOM05D000455 ORTHO05D000434 5.7e-22 108.2 140 44.3
Actinidia15833 Actinidia chinensis HOM05D000455 ORTHO05D000434 7.5e-22 107.8 146 51.4
Lj2g0024646 Lotus japonicus HOM05D000455 ORTHO05D000434 7.5e-22 107.8 159 44.0
MD06G1111900 Malus domestica HOM05D000455 ORTHO05D000434 7.5e-22 107.8 164 43.9
FAN08G0575 Fragaria x ananassa HOM05D000455 ORTHO05D000434 1.3e-21 107.1 160 43.1
ClCG07G011370 Citrullus lanatus HOM05D000455 ORTHO05D000434 1.7e-21 106.7 180 41.7
PGSC0003DMG401005796 Solanum tuberosum HOM05D000455 ORTHO05D000434 2.8e-21 105.9 151 45.0
Nitab4.5_0001962g0080 Nicotiana tabacum HOM05D000455 ORTHO05D000434 3.7e-21 105.5 151 44.4
Nitab4.5_0007285g0040 Nicotiana tabacum HOM05D000455 ORTHO05D000434 1.1e-20 104.0 152 43.4
DCAR_029869 Daucus carota HOM05D000455 ORTHO05D000434 1.4e-20 103.6 143 45.5
FAN04G0646 Fragaria x ananassa HOM05D000455 ORTHO05D000434 1.4e-20 103.6 160 43.1
Aa31LG6G7230 Aethionema arabicum HOM05D000455 ORTHO05D000434 2.4e-20 102.8 160 43.1
PSO170G2314 Papaver somniferum HOM05D000455 ORTHO05D000434 3.1e-20 102.4 197 40.6
Solyc08g008410.3 Solanum lycopersicum HOM05D000455 ORTHO05D000434 4.1e-20 102.1 151 43.0
TAR375G0327 Trochodendron aralioides HOM05D000455 ORTHO05D000434 4.1e-20 102.1 160 41.9
vmacro13878 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 4.1e-20 102.1 145 46.2
PSO063G2561 Papaver somniferum HOM05D000455 ORTHO05D000434 7.0e-20 101.3 200 40.0
Sopen08g004270 Solanum pennellii HOM05D000455 ORTHO05D000434 7.0e-20 101.3 151 43.0
Sopen08g030980 Solanum pennellii HOM05D000455 ORTHO05D000434 7.0e-20 101.3 149 45.6
arahy.Tifrunner.gnm1.ann1.62AJ6F Arachis hypogaea HOM05D000455 ORTHO05D000434 1.6e-19 100.1 150 44.0
BcaC04g22579 Brassica carinata HOM05D000455 ORTHO05D000434 3.5e-19 99.0 141 46.1
C09p17700 Brassica napus HOM05D000455 ORTHO05D000434 3.5e-19 99.0 141 46.1
BolC9t54664H Brassica oleracea HOM05D000455 ORTHO05D000434 3.5e-19 99.0 141 46.1
Nn1g00300 Nelumbo nucifera HOM05D000455 ORTHO05D000434 3.5e-19 99.0 168 45.2
A09p14630 Brassica napus HOM05D000455 ORTHO05D000434 4.5e-19 98.6 141 46.8
BraA09t37109Z Brassica rapa HOM05D000455 ORTHO05D000434 4.5e-19 98.6 141 47.5
arahy.Tifrunner.gnm1.ann1.K1SYDF Arachis hypogaea HOM05D000455 ORTHO05D000434 1.3e-18 97.1 151 44.4
Nitab4.5_0002367g0110 Nicotiana tabacum HOM05D000455 ORTHO05D000434 1.7e-18 96.7 159 42.8
CiPaw.11G116600 Carya illinoinensis HOM05D000455 ORTHO05D000434 2.3e-18 96.3 147 44.9
Rhsim07G0080500 Rhododendron simsii HOM05D000455 ORTHO05D008182 2.3e-18 96.3 149 45.6
PGSC0003DMG402012256 Solanum tuberosum HOM05D000455 ORTHO05D000434 2.3e-18 96.3 136 44.9
Peaxi162Scf00102g00189 Petunia axillaris HOM05D000455 ORTHO05D000434 2.9e-18 95.9 162 41.4
Medtr0022s0430 Medicago truncatula HOM05D000455 ORTHO05D000434 5.0e-18 95.1 158 40.5
QL02p029599 Quercus lobata HOM05D000455 ORTHO05D000434 1.9e-17 93.2 150 42.0
Solyc08g082750.3 Solanum lycopersicum HOM05D000455 ORTHO05D000434 1.9e-17 93.2 126 46.0
EL10Ac5g12952 Beta vulgaris HOM05D000455 ORTHO05D000434 4.2e-17 92.0 141 44.7
Cfa011968 Carpinus fangiana HOM05D000455 ORTHO05D000434 4.2e-17 92.0 147 42.9
AUR62007012 Chenopodium quinoa HOM05D000455 ORTHO05D000434 7.2e-17 91.3 148 44.6
Glyma.10G234100 Glycine max HOM05D000455 ORTHO05D000434 7.2e-17 91.3 137 44.5
Glyma.20G160200 Glycine max HOM05D000455 ORTHO05D000434 1.6e-16 90.1 137 43.1
Haze_09110 Corylus avellana HOM05D000455 ORTHO05D000434 8.0e-16 87.8 147 42.9
Lalb_Chr02g0141111 Lupinus albus HOM05D000455 ORTHO05D000434 1.4e-15 87.0 162 42.0
AUR62019876 Chenopodium quinoa HOM05D000455 ORTHO05D000434 4.0e-15 85.5 148 43.2
Nitab4.5_0002793g0050 Nicotiana tabacum HOM05D000455 ORTHO05D000434 4.0e-15 85.5 135 42.2
Lsat_1_v5_gn_6_8860 Lactuca sativa HOM05D000455 ORTHO05D000434 1.2e-14 84.0 136 40.4
Sc01g0010440 Simmondsia chinensis HOM05D000455 ORTHO05D000434 1.2e-14 84.0 156 40.4
BcaB07g31472 Brassica carinata HOM05D000455 ORTHO05D000434 1.5e-14 83.6 141 41.8
CiPaw.12G080700 Carya illinoinensis HOM05D000455 ORTHO05D000434 2.0e-14 83.2 154 41.6
Hund11373 Selenicereus undatus HOM05D000455 ORTHO05D000434 2.0e-14 83.2 142 40.8
Lj8A204T64 Lonicera japonica HOM05D000455 ORTHO05D000434 4.4e-14 82.0 152 38.8
Ah.07g197660 Amaranthus hybridus HOM05D000455 ORTHO05D000434 1.3e-13 80.5 154 39.6
HanXRQChr07g0189401 Helianthus annuus HOM05D000455 ORTHO05D000434 2.2e-13 79.7 135 41.5
C07p53310 Brassica napus HOM05D000455 ORTHO05D000434 3.7e-13 79.0 59 66.1
Ah.12g052850 Amaranthus hybridus HOM05D000455 ORTHO05D000434 1.1e-12 77.4 148 38.5
Prupe.5G124900 Prunus persica HOM05D000455 ORTHO05D000434 1.1e-12 77.4 69 58.0
CSS0033204 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.8e-12 76.6 135 38.5
CSS0045154 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.8e-12 76.6 135 38.5
HanXRQChr05g0133731 Helianthus annuus HOM05D000455 ORTHO05D000434 2.4e-12 76.3 138 42.8
Aqoxy6G00618 Aquilegia oxysepala HOM05D000455 ORTHO05D000434 4.1e-12 75.5 146 36.3
ECA233G4315 Erigeron canadensis HOM05D000455 ORTHO05D000434 7.0e-12 74.7 151 34.4
Peaxi162Scf00074g00543 Petunia axillaris HOM05D000455 ORTHO05D000434 2.7e-11 72.8 148 37.2
CAN.G792.32 Capsicum annuum HOM05D000455 ORTHO05D000434 5.9e-11 71.6 106 44.3
Sc22g0004850 Simmondsia chinensis HOM05D000455 ORTHO05D000434 1.3e-10 70.5 170 37.6
HanXRQChr02g0047821 Helianthus annuus HOM05D000455 ORTHO05D000434 3.8e-10 68.9 138 36.2
Potri.001G087900 Populus trichocarpa HOM05D000455 ORTHO05D000434 4.7e-08 62.0 34 76.5
FAN18G2932 Fragaria x ananassa HOM05D000455 ORTHO05D000434 1.4e-07 60.5 55 58.2
Haze_09108 Corylus avellana HOM05D000455 ORTHO05D000434 1.8e-07 60.1 59 54.2
PSO384G5086 Papaver somniferum HOM05D000455 ORTHO05D000434 1.8e-07 60.1 124 36.3
Sed0024207 Sechium edule HOM05D000455 ORTHO05D000434 4.0e-07 58.9 34 73.5
MBI07_g24769_MAGBIO Magnolia biondii HOM05D000455 ORTHO05D000434 5.2e-07 58.5 169 32.5
PSO135G1031 Papaver somniferum HOM05D000455 ORTHO05D000434 1.2e-06 57.4 179 32.4
Sed0008415 Sechium edule HOM05D000455 ORTHO05D000434 1.5e-06 57.0 34 70.6
Os01g0236700 Oryza sativa ssp. japonica HOM05D000455 ORTHO05D000434 7.5e-06 54.7 136 33.1


User provided reference genes

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