Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 1.4e-57 226.1 115 100.0
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.4e-30 136.3 97 71.1
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 1.9e-30 136.0 97 72.2
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 4.2e-30 134.8 97 68.0
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 2.1e-29 132.5 96 67.7
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 4.6e-29 131.3 95 67.4
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 7.9e-29 130.6 97 69.1
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 1.0e-28 130.2 98 66.3
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 3.9e-28 128.3 103 64.1
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 8.7e-28 127.1 96 68.8
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 1.1e-27 126.7 105 60.0
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 1.5e-27 126.3 98 63.3
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 2.5e-27 125.6 95 67.4
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 4.3e-27 124.8 98 66.3
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 5.7e-27 124.4 98 66.3
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 7.4e-27 124.0 98 62.2
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 9.6e-27 123.6 99 64.6
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 2.1e-26 122.5 97 62.9
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 2.8e-26 122.1 101 62.4
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 2.8e-26 122.1 98 63.3
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 2.8e-26 122.1 99 63.6
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 6.3e-26 120.9 116 56.9
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 6.3e-26 120.9 116 56.9
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 6.3e-26 120.9 96 63.5
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 6.3e-26 120.9 95 66.3
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 6.3e-26 120.9 99 62.6
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 8.2e-26 120.6 97 66.0
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 1.1e-25 120.2 95 63.2
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 1.1e-25 120.2 104 59.6
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.1e-25 120.2 104 59.6
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 1.8e-25 119.4 94 66.0
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 1.8e-25 119.4 98 64.3
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 3.1e-25 118.6 98 56.1
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 3.1e-25 118.6 104 56.7
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 5.3e-25 117.9 98 63.3
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 5.3e-25 117.9 98 59.2
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 9.0e-25 117.1 97 60.8
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 9.0e-25 117.1 97 60.8
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 9.0e-25 117.1 104 56.7
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 9.0e-25 117.1 104 56.7
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 9.0e-25 117.1 95 63.2
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 1.2e-24 116.7 96 58.3
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 2.6e-24 115.5 101 57.4
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.6e-24 115.5 104 57.7
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 3.4e-24 115.2 97 58.8
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 5.9e-24 114.4 98 62.2
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 5.9e-24 114.4 107 57.0
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 2.9e-23 112.1 97 60.8
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 2.9e-23 112.1 103 58.3
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 3.8e-23 111.7 97 57.7
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 5.0e-23 111.3 95 61.1
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 6.5e-23 110.9 97 56.7
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 8.4e-23 110.5 97 58.8
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 1.1e-22 110.2 98 59.2
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 1.1e-22 110.2 97 59.8
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 1.4e-22 109.8 97 59.8
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 1.4e-22 109.8 95 57.9
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 1.9e-22 109.4 97 56.7
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 3.2e-22 108.6 98 60.2
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 4.2e-22 108.2 97 57.7
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 7.2e-22 107.5 97 55.7
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 7.2e-22 107.5 94 59.6
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 1.2e-21 106.7 116 54.3
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 1.2e-21 106.7 98 58.2
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 2.1e-21 105.9 97 59.8
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 2.7e-21 105.5 98 59.2
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 4.6e-21 104.8 97 55.7
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 7.9e-21 104.0 95 55.8
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 7.9e-21 104.0 94 56.4
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 3.0e-20 102.1 97 51.5
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 1.5e-19 99.8 98 51.0
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 2.5e-19 99.0 97 54.6
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 2.5e-19 99.0 97 55.7
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 3.3e-19 98.6 100 55.0
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 3.3e-19 98.6 97 54.6
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 4.3e-19 98.2 100 56.0
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 5.7e-19 97.8 117 49.6
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 7.4e-19 97.4 94 53.2
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 7.4e-19 97.4 97 50.5
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 1.6e-18 96.3 98 49.0
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 5.3e-17 91.3 100 52.0
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 6.9e-17 90.9 90 55.6
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 1.2e-16 90.1 103 48.5
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 2.9e-15 85.5 97 46.4
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 5.5e-14 81.3 83 55.4
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 3.6e-13 78.6 71 56.3
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 1.0e-12 77.0 65 63.1
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 1.2e-08 63.5 114 43.9
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.0e-07 60.5 42 61.9
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.2e-07 59.3 42 59.5
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 5.5e-06 54.7 87 39.1
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 5.5e-06 54.7 87 39.1


User provided reference genes

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