Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c39823 Carica papaya HOM05D002312 ORTHO05D006455 7.6e-09 62.4 33 100.0
Thecc.06G004500 Theobroma cacao HOM05D002312 ORTHO05D006455 1.7e-08 61.2 33 93.9
Duzib235G0594 Durio zibethinus HOM05D002312 ORTHO05D006455 2.2e-08 60.8 33 90.9
COL.COLO4_26859 Corchorus olitorius HOM05D002312 ORTHO05D006455 8.4e-08 58.9 33 90.9
Duzib160G0486 Durio zibethinus HOM05D002312 ORTHO05D006455 1.1e-07 58.5 33 87.9
Rhsim02G0162600 Rhododendron simsii HOM05D002312 ORTHO05D006455 1.1e-07 58.5 33 84.8
Atru.chr10.809 Acer truncatum HOM05D002312 ORTHO05D006455 1.9e-07 57.8 33 84.8
Actinidia31386 Actinidia chinensis HOM05D002312 ORTHO05D006455 1.9e-07 57.8 33 87.9
Actinidia32358 Actinidia chinensis HOM05D002312 ORTHO05D006455 1.9e-07 57.8 33 87.9
Potri.011G164000 Populus trichocarpa HOM05D002312 ORTHO05D006455 1.9e-07 57.8 33 84.8
Sabra11G0141000 Salix brachista HOM05D002312 ORTHO05D006455 1.9e-07 57.8 33 84.8
Lalb_Chr18g0058011 Lupinus albus HOM05D002312 ORTHO05D006455 2.4e-07 57.4 33 84.8
PGR083G0156 Punica granatum HOM05D002312 ORTHO05D006455 2.4e-07 57.4 33 87.9
CSS0044397 Camellia sinensis var. sinensis HOM05D002312 ORTHO05D006455 3.2e-07 57.0 33 81.8
Lj6g0011254 Lotus japonicus HOM05D002312 ORTHO05D006455 3.2e-07 57.0 33 84.8
Lalb_Chr15g0088791 Lupinus albus HOM05D002312 ORTHO05D006455 3.2e-07 57.0 33 84.8
Ca_00847_v3 Cicer arietinum L. HOM05D002312 ORTHO05D006455 4.2e-07 56.6 33 87.9
CDE02G4668 Ceratophyllum demersum HOM05D002312 ORTHO05D006455 5.4e-07 56.2 33 84.8
Glyma.09G024800 Glycine max HOM05D002312 ORTHO05D006455 5.4e-07 56.2 33 81.8
Glyma.15G130800 Glycine max HOM05D002312 ORTHO05D006455 5.4e-07 56.2 33 81.8
Manes.01G128100 Manihot esculenta HOM05D002312 ORTHO05D006455 5.4e-07 56.2 33 78.8
THA.LOC104812689 Tarenaya hassleriana HOM05D002312 ORTHO05D006455 5.4e-07 56.2 33 87.9
GSVIVG01021666001 Vitis vinifera HOM05D002312 ORTHO05D006455 5.4e-07 56.2 33 84.8
MELO3C002816.2 Cucumis melo HOM05D002312 ORTHO05D006455 7.1e-07 55.8 33 84.8
Phvul.006G127800 Phaseolus vulgaris HOM05D002312 ORTHO05D006455 7.1e-07 55.8 33 81.8
Sabra16G0316200 Salix brachista HOM05D002312 ORTHO05D006455 7.1e-07 55.8 33 78.8
Medtr2g030370 Medicago truncatula HOM05D002312 ORTHO05D006455 9.3e-07 55.5 33 84.8
Psat1g167280 Pisum sativum HOM05D002312 ORTHO05D006455 9.3e-07 55.5 33 84.8
TPR.G26358 Trifolium pratense HOM05D002312 ORTHO05D006455 9.3e-07 55.5 33 84.8
VMungo0540G2392 Vigna mungo HOM05D002312 ORTHO05D006455 9.3e-07 55.5 33 78.8
HanXRQChr17g0564001 Helianthus annuus HOM05D002312 ORTHO05D006455 1.2e-06 55.1 33 81.8
Potri.001G465900 Populus trichocarpa HOM05D002312 ORTHO05D006455 1.2e-06 55.1 33 75.8
CsaV3_1G037270 Cucumis sativus L. HOM05D002312 ORTHO05D006455 1.6e-06 54.7 33 81.8
Dinv09121 Davidia involucrata HOM05D002312 ORTHO05D006455 1.6e-06 54.7 33 84.8
Sp1g26490 Schrenkiella parvula HOM05D002312 ORTHO05D006455 1.6e-06 54.7 33 84.8
SGA_v2.0_scaffold106G30674 Striga asiatica HOM05D002312 ORTHO05D006455 1.6e-06 54.7 33 78.8
Gohir.D10G004600 Gossypium hirsutum HOM05D002312 ORTHO05D006455 2.1e-06 54.3 33 78.8
Gorai.011G005000 Gossypium raimondii HOM05D002312 ORTHO05D006455 2.1e-06 54.3 33 78.8
Nn3g20144 Nelumbo nucifera HOM05D002312 ORTHO05D006455 2.1e-06 54.3 33 81.8
Ciclev10015175m.g Citrus clementina HOM05D002312 ORTHO05D006455 2.7e-06 53.9 33 78.8
Gohir.A10G004600 Gossypium hirsutum HOM05D002312 ORTHO05D006455 2.7e-06 53.9 33 75.8
QL05p062565 Quercus lobata HOM05D002312 ORTHO05D006455 2.7e-06 53.9 33 84.8
TAR629G0264 Trochodendron aralioides HOM05D002312 ORTHO05D006455 2.7e-06 53.9 33 81.8
ATR0165G034 Amborella trichopoda HOM05D002312 ORTHO05D006455 3.5e-06 53.5 33 81.8
arahy.Tifrunner.gnm1.ann1.8TIL4Q Arachis hypogaea HOM05D002312 ORTHO05D006455 3.5e-06 53.5 33 81.8
arahy.Tifrunner.gnm1.ann1.IEPX8R Arachis hypogaea HOM05D002312 ORTHO05D006455 3.5e-06 53.5 33 81.8
CANSAT35G0114 Cannabis sativa HOM05D002312 ORTHO05D006455 3.5e-06 53.5 31 80.6
Lsat_1_v5_gn_4_29961 Lactuca sativa HOM05D002312 ORTHO05D006455 3.5e-06 53.5 33 81.8
TWI38G1744 Tripterygium wilfordii HOM05D002312 ORTHO05D006455 3.5e-06 53.5 33 75.8
Ah.14g086140 Amaranthus hybridus HOM05D002312 ORTHO05D006455 4.6e-06 53.1 33 78.8
CAN.G23.12 Capsicum annuum HOM05D002312 ORTHO05D006455 4.6e-06 53.1 31 83.9
Cfa000812 Carpinus fangiana HOM05D002312 ORTHO05D006455 4.6e-06 53.1 33 78.8
CDE05G0356 Ceratophyllum demersum HOM05D002312 ORTHO05D006455 4.6e-06 53.1 33 78.8
Hund21565 Selenicereus undatus HOM05D002312 ORTHO05D006455 6.0e-06 52.8 31 77.4
Zm00001eb413580 Zea mays HOM05D002312 ORTHO05D006455 6.0e-06 52.8 33 78.8
Aqoxy1G01571 Aquilegia oxysepala HOM05D002312 ORTHO05D006455 7.8e-06 52.4 33 81.8
Migut.H01325 Erythranthe guttata HOM05D002312 ORTHO05D006455 7.8e-06 52.4 31 80.6
Eucgr.D00127 Eucalyptus grandis HOM05D002312 ORTHO05D006455 7.8e-06 52.4 33 78.8
MBI02_g25372_MAGBIO Magnolia biondii HOM05D002312 ORTHO05D006455 7.8e-06 52.4 33 78.8
MD10G1252400 Malus domestica HOM05D002312 ORTHO05D006455 7.8e-06 52.4 33 78.8
Prupe.4G091100 Prunus persica HOM05D002312 ORTHO05D006455 7.8e-06 52.4 33 78.8
THA.LOC104798596 Tarenaya hassleriana HOM05D002312 ORTHO05D006455 7.8e-06 52.4 33 78.8
unitig_21.g20644 Utricularia gibba HOM05D002312 ORTHO05D006455 7.8e-06 52.4 31 80.6


User provided reference genes

Program Settings