Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c39652 Carica papaya HOM05D005609 ORTHO05D006871 9.2e-47 189.9 97 100.0
Cpa.g.sc52.59 Carica papaya HOM05D005609 ORTHO05D006871 5.8e-33 144.1 84 86.9
TWI23G1015 Tripterygium wilfordii HOM05D005609 ORTHO05D006871 5.1e-29 131.0 84 81.0
BcaC08g47546 Brassica carinata HOM05D005609 ORTHO05D006871 6.7e-29 130.6 84 76.2
Thecc.02G366200 Theobroma cacao HOM05D005609 ORTHO05D006871 6.7e-29 130.6 84 77.4
Potri.002G134900 Populus trichocarpa HOM05D005609 ORTHO05D006871 1.1e-28 129.8 84 78.6
CARHR073710 Cardamine hirsuta HOM05D005609 ORTHO05D006871 1.5e-28 129.4 84 75.0
Cfa022162 Carpinus fangiana HOM05D005609 ORTHO05D006871 1.5e-28 129.4 84 78.6
Thhalv10018566m.g Eutrema salsugineum HOM05D005609 ORTHO05D006871 1.5e-28 129.4 84 75.0
Sp5g34990 Schrenkiella parvula HOM05D005609 ORTHO05D006871 1.5e-28 129.4 84 75.0
BcaB02g07248 Brassica carinata HOM05D000537 ORTHO05D006871 1.9e-28 129.0 84 75.0
BcaC08g45338 Brassica carinata HOM05D005609 ORTHO05D006871 1.9e-28 129.0 84 75.0
A07p44900 Brassica napus HOM05D005609 ORTHO05D006871 2.5e-28 128.6 84 75.0
Manes.05G059500 Manihot esculenta HOM05D005609 ORTHO05D006871 2.5e-28 128.6 84 77.4
PGR142G0047 Punica granatum HOM05D005609 ORTHO05D006871 3.3e-28 128.3 84 73.8
AT1G80770 Arabidopsis thaliana HOM05D005609 ORTHO05D006871 4.3e-28 127.9 84 73.8
Carub.0002s0078 Capsella rubella HOM05D005609 ORTHO05D006871 4.3e-28 127.9 84 73.8
CiPaw.14G015500 Carya illinoinensis HOM05D005609 ORTHO05D006871 4.3e-28 127.9 84 78.6
THA.LOC104804469 Tarenaya hassleriana HOM05D005609 ORTHO05D006871 5.6e-28 127.5 84 73.8
TAR375G0879 Trochodendron aralioides HOM05D005609 ORTHO05D006871 5.6e-28 127.5 84 75.0
QL04p025874 Quercus lobata HOM05D005609 ORTHO05D006871 7.4e-28 127.1 84 76.2
AL2G40620 Arabidopsis lyrata HOM05D005609 ORTHO05D006871 9.6e-28 126.7 84 72.6
Dinv43582 Davidia involucrata HOM05D005609 ORTHO05D006871 9.6e-28 126.7 84 77.4
CSS0041858 Camellia sinensis var. sinensis HOM05D005609 ORTHO05D006871 1.3e-27 126.3 84 78.6
Prupe.2G114600 Prunus persica HOM05D005609 ORTHO05D006871 1.3e-27 126.3 84 76.2
Aa31LG4G1030 Aethionema arabicum HOM05D005609 ORTHO05D006871 1.6e-27 125.9 84 73.8
Haze_02915 Corylus avellana HOM05D005609 ORTHO05D006871 1.6e-27 125.9 84 77.4
BolC6t40388H Brassica oleracea HOM05D005609 ORTHO05D006871 2.1e-27 125.6 85 74.1
Nn1g00634 Nelumbo nucifera HOM05D005609 ORTHO05D006871 2.1e-27 125.6 84 75.0
Lj9A548T58 Lonicera japonica HOM05D005609 ORTHO05D006871 2.8e-27 125.2 84 76.2
PSO017G2814 Papaver somniferum HOM05D005609 ORTHO05D006871 2.8e-27 125.2 84 75.0
COL.COLO4_11253 Corchorus olitorius HOM05D005609 ORTHO05D006871 3.7e-27 124.8 84 76.2
Gohir.D09G165100 Gossypium hirsutum HOM05D005609 ORTHO05D006871 3.7e-27 124.8 84 75.0
Gorai.006G186900 Gossypium raimondii HOM05D005609 ORTHO05D006871 3.7e-27 124.8 84 75.0
A07p26850 Brassica napus HOM05D000537 ORTHO05D006871 4.8e-27 124.4 85 74.1
C06p29500 Brassica napus HOM05D000537 ORTHO05D006871 4.8e-27 124.4 85 74.1
BolC6t38114H Brassica oleracea HOM05D005609 ORTHO05D006871 4.8e-27 124.4 85 74.1
BraA07t30328Z Brassica rapa HOM05D005609 ORTHO05D006871 4.8e-27 124.4 85 74.1
Eucgr.E03531 Eucalyptus grandis HOM05D005609 ORTHO05D006871 4.8e-27 124.4 84 72.6
Sed0001863 Sechium edule HOM05D005609 ORTHO05D006871 4.8e-27 124.4 84 75.0
Atru.chr5.35 Acer truncatum HOM05D005609 ORTHO05D006871 6.2e-27 124.0 84 75.0
Atru.chr5.65 Acer truncatum HOM05D005609 ORTHO05D006871 6.2e-27 124.0 84 75.0
BraA07t31997Z Brassica rapa HOM05D005609 ORTHO05D006871 6.2e-27 124.0 85 74.1
ClCG05G002820 Citrullus lanatus HOM05D005609 ORTHO05D006871 6.2e-27 124.0 84 73.8
Gohir.A09G169400 Gossypium hirsutum HOM05D005609 ORTHO05D006871 6.2e-27 124.0 84 75.0
MSTRG.20658 Avicennia marina HOM05D005609 ORTHO05D006871 8.1e-27 123.6 83 72.3
DCAR_029525 Daucus carota HOM05D005609 ORTHO05D006871 8.1e-27 123.6 84 71.4
MD07G1087900 Malus domestica HOM05D005609 ORTHO05D006871 8.1e-27 123.6 84 73.8
Duzib268G1371 Durio zibethinus HOM05D005609 ORTHO05D006871 1.1e-26 123.2 83 72.3
PSO063G0967 Papaver somniferum HOM05D005609 ORTHO05D006871 1.1e-26 123.2 84 73.8
FvH4_7g08680 Fragaria vesca HOM05D005609 ORTHO05D006871 1.4e-26 122.9 84 73.8
FAN03G0926 Fragaria x ananassa HOM05D005609 ORTHO05D006871 1.4e-26 122.9 84 73.8
FAN06G0131 Fragaria x ananassa HOM05D005609 ORTHO05D006871 1.4e-26 122.9 84 73.8
FAN10G3233 Fragaria x ananassa HOM05D005609 ORTHO05D006871 1.4e-26 122.9 84 73.8
FAN10G3950 Fragaria x ananassa HOM05D005609 ORTHO05D006871 1.4e-26 122.9 84 73.8
RcHm_v2.0_Chr1g0343911 Rosa chinensis HOM05D005609 ORTHO05D006871 1.4e-26 122.9 84 72.6
Sopen09g033380 Solanum pennellii HOM05D005609 ORTHO05D006871 1.4e-26 122.9 84 75.0
Hma1.2p1_0973F.1_g243010 Hydrangea macrophylla HOM05D005609 ORTHO05D006871 1.8e-26 122.5 84 75.0
Solyc09g090460.3 Solanum lycopersicum HOM05D005609 ORTHO05D006871 2.4e-26 122.1 84 73.8
CANSAT25G0413 Cannabis sativa HOM05D005609 ORTHO05D006871 3.1e-26 121.7 91 72.5
CAN.G221.2 Capsicum annuum HOM05D005609 ORTHO05D006871 3.1e-26 121.7 84 73.8
MELO3C006259.2 Cucumis melo HOM05D005609 ORTHO05D006871 3.1e-26 121.7 84 73.8
PGSC0003DMG403017205 Solanum tuberosum HOM05D005609 ORTHO05D006871 5.3e-26 120.9 84 73.8
CsaV3_3G010350 Cucumis sativus L. HOM05D005609 ORTHO05D006871 6.9e-26 120.6 84 72.6
MD02G1225900 Malus domestica HOM05D005609 ORTHO05D006871 1.2e-25 119.8 84 71.4
Peaxi162Scf00103g01924 Petunia axillaris HOM05D005609 ORTHO05D006871 1.2e-25 119.8 84 72.6
HanXRQChr02g0046691 Helianthus annuus HOM05D005609 ORTHO05D006871 1.5e-25 119.4 84 70.2
Nitab4.5_0000204g0040 Nicotiana tabacum HOM05D005609 ORTHO05D006871 1.5e-25 119.4 84 70.2
Actinidia05794 Actinidia chinensis HOM05D005609 ORTHO05D006871 2.0e-25 119.0 84 75.0
Lsat_1_v5_gn_4_38680 Lactuca sativa HOM05D005609 ORTHO05D006871 2.0e-25 119.0 84 71.4
SGA_v2.0_scaffold45G17248 Striga asiatica HOM05D005609 ORTHO05D006871 3.4e-25 118.2 84 73.8
GSVIVG01022468001 Vitis vinifera HOM05D005609 ORTHO05D006871 3.4e-25 118.2 84 71.4
Sc26g0001790 Simmondsia chinensis HOM05D005609 ORTHO05D006871 4.5e-25 117.9 84 72.6
arahy.Tifrunner.gnm1.ann1.R04L27 Arachis hypogaea HOM05D005609 ORTHO05D006871 9.9e-25 116.7 84 70.2
Aqoxy3G02536 Aquilegia oxysepala HOM05D005609 ORTHO05D006871 1.3e-24 116.3 84 69.0
arahy.Tifrunner.gnm1.ann1.HH0QF2 Arachis hypogaea HOM05D005609 ORTHO05D006871 1.7e-24 115.9 84 69.0
Migut.K00777 Erythranthe guttata HOM05D005609 ORTHO05D006871 1.7e-24 115.9 84 71.4
Zm00001eb415700 Zea mays HOM05D005609 ORTHO05D006871 1.7e-24 115.9 84 70.2
vmacro13537 Vaccinium macrocarpon HOM05D005609 ORTHO05D006871 2.2e-24 115.5 84 71.4
Oeu021960.2 Olea europaea HOM05D005609 ORTHO05D006871 2.9e-24 115.2 102 59.8
Os08g0158900 Oryza sativa ssp. japonica HOM05D005609 ORTHO05D006871 3.8e-24 114.8 84 69.0
Lj1g0022406 Lotus japonicus HOM05D005609 ORTHO05D006871 4.9e-24 114.4 84 69.0
Nitab4.5_0011341g0010 Nicotiana tabacum HOM05D005609 ORTHO05D006871 8.4e-24 113.6 84 67.9
Ah.16g103320 Amaranthus hybridus HOM05D005609 ORTHO05D006871 1.1e-23 113.2 86 68.6
VMungo1080G1222 Vigna mungo HOM05D005609 ORTHO05D006871 1.9e-23 112.5 84 67.9
unitig_26.g8865 Utricularia gibba HOM05D005609 ORTHO05D006871 2.4e-23 112.1 84 66.7
Rhsim07G0039900 Rhododendron simsii HOM05D005609 ORTHO05D006871 3.2e-23 111.7 84 67.9
ECA234G4049 Erigeron canadensis HOM05D005609 ORTHO05D006871 4.2e-23 111.3 84 65.5
Glyma.08G340000 Glycine max HOM05D005609 ORTHO05D006871 4.2e-23 111.3 84 66.7
Lalb_Chr03g0040871 Lupinus albus HOM05D005609 ORTHO05D006871 4.2e-23 111.3 86 66.3
Phvul.008G139400 Phaseolus vulgaris HOM05D005609 ORTHO05D006871 4.2e-23 111.3 84 67.9
Ciclev10020203m.g Citrus clementina HOM05D005609 ORTHO05D006871 5.5e-23 110.9 84 70.2
TPR.G20612 Trifolium pratense HOM05D005609 ORTHO05D006871 1.2e-22 109.8 84 66.7
Ca_20451_v3 Cicer arietinum L. HOM05D005609 ORTHO05D006871 1.6e-22 109.4 84 65.5
Psat3g155960 Pisum sativum HOM05D005609 ORTHO05D006871 1.6e-22 109.4 82 67.1
Medtr7g450930 Medicago truncatula HOM05D005609 ORTHO05D006871 2.7e-22 108.6 84 65.5
ATR0665G596 Amborella trichopoda HOM05D005609 ORTHO05D006871 3.5e-22 108.2 84 65.5
HPP92_027052 Vanilla planifolia HOM05D005609 ORTHO05D006871 1.8e-21 105.9 84 64.3
Aqoxy3G02539 Aquilegia oxysepala HOM05D005609 ORTHO05D006871 3.0e-21 105.1 71 69.0
CDE11G0052 Ceratophyllum demersum HOM05D005609 ORTHO05D006871 3.9e-21 104.8 84 64.3
Mapoly0062s0042 Marchantia polymorpha HOM05D005609 ORTHO05D006871 1.9e-20 102.4 84 64.3
CDE02G3958 Ceratophyllum demersum HOM05D005609 ORTHO05D006871 9.6e-20 100.1 84 60.7
AagrBONN_evm.TU.Sc2ySwM_362.855 Anthoceros agrestis HOM05D005609 ORTHO05D006871 2.1e-19 99.0 83 60.2
Pp3c1_10540 Physcomitrium patens HOM05D005609 ORTHO05D006871 2.1e-19 99.0 83 59.0
BcaC01g05159 Brassica carinata HOM05D005609 ORTHO05D006871 2.8e-19 98.6 71 71.8
BcaC01g03983 Brassica carinata HOM05D005609 ORTHO05D006871 1.1e-18 96.7 72 69.4
SMO174G0003 Selaginella moellendorffii HOM05D005609 ORTHO05D006871 5.3e-18 94.4 84 58.3
SMO174G0269 Selaginella moellendorffii HOM05D005609 ORTHO05D006871 5.3e-18 94.4 84 58.3
Aqoxy7G01889 Aquilegia oxysepala HOM05D005609 ORTHO05D006871 9.3e-15 83.6 88 50.0
CBR_g3918 Chara braunii HOM05D005609 ORTHO05D006871 1.9e-12 75.9 83 51.8
EL10Ac1g00709 Beta vulgaris HOM05D005609 ORTHO05D006871 3.4e-09 65.1 84 48.8
AUR62013794 Chenopodium quinoa HOM05D005609 ORTHO05D006871 5.9e-09 64.3 98 46.9
Cre08.g384355 Chlamydomonas reinhardtii HOM05D005609 ORTHO05D006871 7.6e-09 63.9 68 45.6
AUR62023361 Chenopodium quinoa HOM05D005609 ORTHO05D006871 2.9e-08 62.0 47 70.2
Hund17127 Selenicereus undatus HOM05D005609 ORTHO05D006871 1.1e-07 60.1 83 43.4
Dinv44009 Davidia involucrata HOM05D005609 ORTHO05D006871 5.5e-07 57.8 36 72.2
HPP92_008983 Vanilla planifolia HOM05D005609 ORTHO05D006871 4.6e-06 54.7 84 38.1


User provided reference genes

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