Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c39615 Carica papaya HOM05D012289 ORTHO05D000126 7.6e-58 226.9 108 100.0
Cpa.g.c37530 Carica papaya HOM05D012289 ORTHO05D000126 2.0e-21 105.9 103 47.6
Cpa.g.c37896 Carica papaya HOM05D000003 ORTHO05D000126 2.0e-21 105.9 103 47.6
Cpa.g.c42757 Carica papaya HOM05D012289 ORTHO05D000126 2.0e-21 105.9 103 47.6
Cpa.g.c26848 Carica papaya HOM05D012289 ORTHO05D000126 3.3e-21 105.1 88 52.3
Cpa.g.c28289.2 Carica papaya HOM05D012289 ORTHO05D000126 1.4e-19 99.8 103 50.5
Cpa.g.sc4.20 Carica papaya HOM05D000003 ORTHO05D000126 1.3e-17 93.2 77 54.5
Cpa.g.sc4.190 Carica papaya HOM05D012289 ORTHO05D000126 1.9e-16 89.4 86 52.3
Cpa.g.sc82.71 Carica papaya HOM05D000003 ORTHO05D000126 4.2e-16 88.2 60 66.7
Manes.04G087125 Manihot esculenta HOM05D000003 ORTHO05D000006 1.1e-13 80.1 99 36.4
Cpa.g.sc15.19 Carica papaya HOM05D012289 ORTHO05D000126 6.3e-12 74.3 78 47.4
CANSAT01G2163 Cannabis sativa HOM05D000003 ORTHO05D000126 1.1e-11 73.6 92 41.3
CANSAT01G2293 Cannabis sativa HOM05D000003 ORTHO05D000126 1.4e-11 73.2 100 36.0
CANSAT25G1129 Cannabis sativa HOM05D000003 ORTHO05D000126 1.8e-11 72.8 98 39.8
CANSAT21G2347 Cannabis sativa HOM05D000003 ORTHO05D000126 3.1e-11 72.0 83 41.0
CANSAT35G1400 Cannabis sativa HOM05D000003 ORTHO05D000126 3.1e-11 72.0 100 37.0
CANSAT56G1743 Cannabis sativa HOM05D000003 ORTHO05D000126 5.3e-11 71.2 92 39.1
Lj4C35T6 Lonicera japonica HOM05D000003 ORTHO05D000126 5.3e-11 71.2 73 41.1
CANSAT21G0791 Cannabis sativa HOM05D000003 ORTHO05D000126 7.0e-11 70.9 104 36.5
CANSAT25G0594 Cannabis sativa HOM05D000003 ORTHO05D000126 7.0e-11 70.9 101 35.6
CANSAT64G0727 Cannabis sativa HOM05D000003 ORTHO05D000126 7.0e-11 70.9 104 34.6
CANSAT78G2226 Cannabis sativa HOM05D000003 ORTHO05D000126 7.0e-11 70.9 104 33.7
SHI02061 Sapria himalayana HOM05D000003 ORTHO05D000126 7.0e-11 70.9 100 34.0
CANSAT21G1230 Cannabis sativa HOM05D000003 ORTHO05D000126 1.2e-10 70.1 100 39.0
CANSAT78G1810 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-10 70.1 92 38.0
Lj8C13T6 Lonicera japonica HOM05D000003 ORTHO05D000126 1.2e-10 70.1 102 32.4
CANSAT25G0383 Cannabis sativa HOM05D000003 ORTHO05D000126 2.0e-10 69.3 68 41.2
CANSAT25G1151 Cannabis sativa HOM05D000003 ORTHO05D000126 2.0e-10 69.3 68 45.6
CANSAT56G1157 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-10 69.3 68 45.6
CANSAT64G1905 Cannabis sativa HOM05D000003 ORTHO05D000126 2.0e-10 69.3 68 44.1
CANSAT01G3270 Cannabis sativa HOM05D000003 ORTHO05D000126 2.6e-10 68.9 97 34.0
CANSAT11G0233 Cannabis sativa HOM05D000003 ORTHO05D000126 2.6e-10 68.9 104 33.7
Gorai.007G281800 Gossypium raimondii HOM05D000003 ORTHO05D000126 3.5e-10 68.6 59 47.5
Lju897C2T1 Lonicera japonica HOM05D000003 ORTHO05D000126 3.5e-10 68.6 70 42.9
CANSAT01G0344 Cannabis sativa HOM05D000003 ORTHO05D000126 4.5e-10 68.2 68 44.1
CANSAT01G0472 Cannabis sativa HOM05D000003 ORTHO05D000126 4.5e-10 68.2 70 44.3
CANSAT78G2235 Cannabis sativa HOM05D000003 ORTHO05D000126 4.5e-10 68.2 70 44.3
CANSAT01G2714 Cannabis sativa HOM05D000003 ORTHO05D000126 5.9e-10 67.8 102 35.3
CANSAT21G0764 Cannabis sativa HOM05D000003 ORTHO05D000126 5.9e-10 67.8 98 37.8
CANSAT78G1434 Cannabis sativa HOM05D000003 ORTHO05D000004 5.9e-10 67.8 102 35.3
CANSAT25G2525 Cannabis sativa HOM05D000003 ORTHO05D000004 7.7e-10 67.4 70 38.6
CANSAT35G1211 Cannabis sativa HOM05D000003 ORTHO05D000126 7.7e-10 67.4 68 44.1
Nn5g27256 Nelumbo nucifera HOM05D000003 ORTHO05D000126 7.7e-10 67.4 68 42.6
CANSAT25G0311 Cannabis sativa HOM05D000003 ORTHO05D000126 1.0e-09 67.0 100 37.0
CANSAT64G2526 Cannabis sativa HOM05D000003 ORTHO05D000126 1.0e-09 67.0 92 39.1
CANSAT80G1454 Cannabis sativa HOM05D000003 ORTHO05D000126 1.0e-09 67.0 68 45.6
CANSAT64G1979 Cannabis sativa HOM05D000003 ORTHO05D000126 1.3e-09 66.6 70 38.6
CANSAT80G0077 Cannabis sativa HOM05D000003 ORTHO05D000126 1.3e-09 66.6 65 41.5
Lj7P520T7 Lonicera japonica HOM05D000003 ORTHO05D000126 1.3e-09 66.6 95 33.7
CANSAT01G0549 Cannabis sativa HOM05D000003 ORTHO05D000126 1.7e-09 66.2 102 33.3
CANSAT80G0239 Cannabis sativa HOM05D000003 ORTHO05D000126 1.7e-09 66.2 98 36.7
Cpa.g.c39939 Carica papaya HOM05D012289 ORTHO05D000126 1.7e-09 66.2 80 45.0
TPR.G40617 Trifolium pratense HOM05D000003 ORTHO05D000126 1.7e-09 66.2 77 40.3
CANSAT11G2125 Cannabis sativa HOM05D000003 ORTHO05D000126 2.2e-09 65.9 68 42.6
CANSAT54G2080 Cannabis sativa HOM05D000003 ORTHO05D000126 2.2e-09 65.9 113 32.7
CANSAT56G1659 Cannabis sativa HOM05D000003 ORTHO05D000126 2.2e-09 65.9 98 35.7
CANSAT11G1944 Cannabis sativa HOM05D000003 ORTHO05D000126 2.9e-09 65.5 68 42.6
CANSAT56G2987 Cannabis sativa HOM05D000003 ORTHO05D000126 2.9e-09 65.5 101 35.6
CANSAT80G2209 Cannabis sativa HOM05D000003 ORTHO05D000126 2.9e-09 65.5 92 40.2
Cpa.g.c33943 Carica papaya HOM05D012289 ORTHO05D000126 2.9e-09 65.5 65 46.2
Lj1P222T20 Lonicera japonica HOM05D000003 ORTHO05D000126 2.9e-09 65.5 69 39.1
TPR.G5809 Trifolium pratense HOM05D000003 ORTHO05D000126 2.9e-09 65.5 86 33.7
CANSAT01G2836 Cannabis sativa HOM05D000003 ORTHO05D000126 3.8e-09 65.1 99 37.4
SHI30882 Sapria himalayana HOM05D000003 ORTHO05D000126 3.8e-09 65.1 100 34.0
Gorai.001G111800 Gossypium raimondii HOM05D000003 ORTHO05D000126 5.0e-09 64.7 58 51.7
CANSAT11G0462 Cannabis sativa HOM05D000003 ORTHO05D000126 6.5e-09 64.3 70 41.4
CANSAT11G1672 Cannabis sativa HOM05D000003 ORTHO05D000126 6.5e-09 64.3 68 36.8
CANSAT25G0749 Cannabis sativa HOM05D000003 ORTHO05D000126 6.5e-09 64.3 67 41.8
CANSAT56G0419 Cannabis sativa HOM05D000003 ORTHO05D000126 6.5e-09 64.3 65 41.5
CANSAT56G2563 Cannabis sativa HOM05D000003 ORTHO05D000126 6.5e-09 64.3 99 38.4
CANSAT56G3060 Cannabis sativa HOM05D000003 ORTHO05D000126 6.5e-09 64.3 104 35.6
CANSAT80G1589 Cannabis sativa HOM05D000003 ORTHO05D000126 6.5e-09 64.3 70 40.0
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 8.5e-09 63.9 95 34.7
CANSAT25G1444 Cannabis sativa HOM05D000003 ORTHO05D000126 8.5e-09 63.9 68 44.1
CANSAT35G1841 Cannabis sativa HOM05D000003 ORTHO05D000126 8.5e-09 63.9 102 31.4
CANSAT51G0005 Cannabis sativa HOM05D000003 ORTHO05D000126 8.5e-09 63.9 69 42.0
CANSAT56G0528 Cannabis sativa HOM05D000003 ORTHO05D000126 8.5e-09 63.9 68 41.2
CANSAT56G2562 Cannabis sativa HOM05D000003 ORTHO05D000126 8.5e-09 63.9 68 42.6
QL08p042055 Quercus lobata HOM05D000003 ORTHO05D000126 8.5e-09 63.9 94 34.0
CANSAT11G0372 Cannabis sativa HOM05D000003 ORTHO05D000126 1.1e-08 63.5 70 40.0
CANSAT25G2375 Cannabis sativa HOM05D000003 ORTHO05D000126 1.1e-08 63.5 102 36.3
CANSAT25G3681 Cannabis sativa HOM05D000003 ORTHO05D000126 1.1e-08 63.5 70 40.0
CANSAT56G1788 Cannabis sativa HOM05D000003 ORTHO05D000126 1.1e-08 63.5 97 30.9
CANSAT13G0002 Cannabis sativa HOM05D000003 ORTHO05D000126 1.5e-08 63.2 70 35.7
CANSAT21G1411 Cannabis sativa HOM05D000003 ORTHO05D000126 1.5e-08 63.2 68 39.7
Cpa.g.c46378 Carica papaya HOM05D000003 ORTHO05D000126 1.5e-08 63.2 52 51.9
Lj2C325T18 Lonicera japonica HOM05D000003 ORTHO05D000126 1.5e-08 63.2 78 37.2
Atru.chr1.3557 Acer truncatum HOM05D000003 ORTHO05D000126 1.9e-08 62.8 98 35.7
Lj8C82T10 Lonicera japonica HOM05D000003 ORTHO05D000126 1.9e-08 62.8 64 45.3
CANSAT01G2193 Cannabis sativa HOM05D000003 ORTHO05D000126 2.5e-08 62.4 97 30.9
CANSAT01G2972 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-08 62.4 63 39.7
CANSAT25G2776 Cannabis sativa HOM05D000003 ORTHO05D000126 2.5e-08 62.4 68 39.7
CANSAT25G1596 Cannabis sativa HOM05D000003 ORTHO05D000126 3.2e-08 62.0 97 34.0
CANSAT54G2916 Cannabis sativa HOM05D000003 ORTHO05D000126 3.2e-08 62.0 97 35.1
Lj1P1051T34 Lonicera japonica HOM05D000003 ORTHO05D000126 3.2e-08 62.0 70 38.6
Ah.10g030850 Amaranthus hybridus HOM05D000003 ORTHO05D000126 4.2e-08 61.6 74 37.8
CANSAT01G0704 Cannabis sativa HOM05D000003 ORTHO05D000126 4.2e-08 61.6 67 41.8
CANSAT56G1129 Cannabis sativa HOM05D000003 ORTHO05D000126 4.2e-08 61.6 67 41.8
CANSAT56G2299 Cannabis sativa HOM05D000003 ORTHO05D000004 4.2e-08 61.6 76 36.8
CANSAT78G0969 Cannabis sativa HOM05D000003 ORTHO05D000126 4.2e-08 61.6 67 41.8
Nn4g22088 Nelumbo nucifera HOM05D000003 ORTHO05D000126 4.2e-08 61.6 52 48.1
Manes.06G103266 Manihot esculenta HOM05D000003 ORTHO05D000004 5.5e-08 61.2 101 31.7
CANSAT01G2613 Cannabis sativa HOM05D000003 ORTHO05D000126 7.2e-08 60.8 89 36.0
Lj5P457T10 Lonicera japonica HOM05D000003 ORTHO05D000126 7.2e-08 60.8 83 36.1
CANSAT01G1699 Cannabis sativa HOM05D000003 ORTHO05D000126 9.4e-08 60.5 101 32.7
Lj8P336T24 Lonicera japonica HOM05D000003 ORTHO05D000126 9.4e-08 60.5 64 40.6
QL04p070148 Quercus lobata HOM05D000003 ORTHO05D000126 9.4e-08 60.5 69 34.8
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.2e-07 60.1 95 32.6
CANSAT25G2150 Cannabis sativa HOM05D000003 ORTHO05D000126 1.2e-07 60.1 54 48.1
QL03p071069 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-07 60.1 71 33.8
CANSAT11G0452 Cannabis sativa HOM05D000003 ORTHO05D000126 1.6e-07 59.7 63 41.3
Gorai.010G122700 Gossypium raimondii HOM05D000003 ORTHO05D000126 1.6e-07 59.7 52 50.0
Lj5P52T12 Lonicera japonica HOM05D000003 ORTHO05D000126 1.6e-07 59.7 87 34.5
QL02p066394 Quercus lobata HOM05D000003 ORTHO05D000126 1.6e-07 59.7 64 35.9
CANSAT64G0848 Cannabis sativa HOM05D000003 ORTHO05D000126 2.1e-07 59.3 78 32.1
Lj2A924G27 Lonicera japonica HOM05D000003 ORTHO05D000126 2.1e-07 59.3 70 35.7
SHI27203 Sapria himalayana HOM05D000003 ORTHO05D000126 2.1e-07 59.3 52 42.3
CSS0049896 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.7e-07 58.9 95 34.7
CANSAT21G2271 Cannabis sativa HOM05D000003 ORTHO05D000126 2.7e-07 58.9 102 32.4
CANSAT35G1890 Cannabis sativa HOM05D000003 ORTHO05D000126 2.7e-07 58.9 67 40.3
Lj2C654T5 Lonicera japonica HOM05D000003 ORTHO05D000126 2.7e-07 58.9 72 36.1
CANSAT01G2120 Cannabis sativa HOM05D000003 ORTHO05D000126 3.6e-07 58.5 104 30.8
CANSAT21G0980 Cannabis sativa HOM05D000003 ORTHO05D000126 3.6e-07 58.5 63 41.3
Lj2C538T6 Lonicera japonica HOM05D000003 ORTHO05D000126 3.6e-07 58.5 67 35.8
TPR.G17733 Trifolium pratense HOM05D000003 ORTHO05D000126 3.6e-07 58.5 98 28.6
Atru.chr6.67 Acer truncatum HOM05D000003 ORTHO05D000126 4.7e-07 58.2 71 39.4
COL.COLO4_10561 Corchorus olitorius HOM05D000003 ORTHO05D000126 4.7e-07 58.2 70 34.3
Lj1C990T5 Lonicera japonica HOM05D000003 ORTHO05D000126 4.7e-07 58.2 68 35.3
QL03p026642 Quercus lobata HOM05D000003 ORTHO05D000126 4.7e-07 58.2 94 29.8
QL09p013251 Quercus lobata HOM05D000003 ORTHO05D000126 4.7e-07 58.2 63 38.1
CANSAT01G1600 Cannabis sativa HOM05D000003 ORTHO05D000126 6.1e-07 57.8 60 40.0
Lj5P270T37 Lonicera japonica HOM05D000003 ORTHO05D000126 6.1e-07 57.8 67 35.8
Lj6g0008318 Lotus japonicus HOM05D000003 ORTHO05D000126 6.1e-07 57.8 107 30.8
QL12p016979 Quercus lobata HOM05D000003 ORTHO05D000126 6.1e-07 57.8 81 33.3
CSS0041731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 8.0e-07 57.4 101 30.7
CANSAT25G1688 Cannabis sativa HOM05D000003 ORTHO05D000126 8.0e-07 57.4 68 36.8
CANSAT35G1319 Cannabis sativa HOM05D000003 ORTHO05D000126 8.0e-07 57.4 70 40.0
CANSAT54G2152 Cannabis sativa HOM05D000003 ORTHO05D000004 8.0e-07 57.4 93 32.3
CANSAT56G1051 Cannabis sativa HOM05D000003 ORTHO05D000126 8.0e-07 57.4 94 30.9
CANSAT64G1968 Cannabis sativa HOM05D000003 ORTHO05D000126 8.0e-07 57.4 63 39.7
COL.COLO4_04212 Corchorus olitorius HOM05D000003 ORTHO05D000126 8.0e-07 57.4 94 31.9
Lj3P316T7 Lonicera japonica HOM05D000003 ORTHO05D000126 8.0e-07 57.4 69 36.2
QL02p014642 Quercus lobata HOM05D000003 ORTHO05D000126 8.0e-07 57.4 78 32.1
SHI39369 Sapria himalayana HOM05D000003 ORTHO05D000006 8.0e-07 57.4 52 44.2
TPR.G37500 Trifolium pratense HOM05D000003 ORTHO05D000126 8.0e-07 57.4 77 29.9
AUR62029897 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.0e-06 57.0 99 30.3
Dinv10075 Davidia involucrata HOM05D000003 ORTHO05D000126 1.0e-06 57.0 107 33.6
QL03p070763 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-06 57.0 71 31.0
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-06 57.0 97 28.9
Dinv10481 Davidia involucrata HOM05D000003 ORTHO05D000126 1.4e-06 56.6 73 38.4
Lj1P1157T26 Lonicera japonica HOM05D000003 ORTHO05D000126 1.4e-06 56.6 76 32.9
Lj6P126T7 Lonicera japonica HOM05D000003 ORTHO05D000126 1.4e-06 56.6 52 44.2
QL12p020478 Quercus lobata HOM05D000003 ORTHO05D000126 1.4e-06 56.6 92 28.3
Atru.chr6.1085 Acer truncatum HOM05D000003 ORTHO05D000126 1.8e-06 56.2 98 33.7
Lj5P129T22 Lonicera japonica HOM05D000003 ORTHO05D000126 1.8e-06 56.2 70 32.9
QL04p092364 Quercus lobata HOM05D000003 ORTHO05D000126 1.8e-06 56.2 95 33.7
TWI63G1223 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.8e-06 56.2 100 33.0
CANSAT80G1020 Cannabis sativa HOM05D000003 ORTHO05D000126 2.3e-06 55.8 68 38.2
AUR62008807 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.3e-06 55.8 108 32.4
Nn8g41082 Nelumbo nucifera HOM05D000003 ORTHO05D000126 2.3e-06 55.8 52 44.2
Rhsim01G0174000 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.3e-06 55.8 75 36.0
CANSAT25G2355 Cannabis sativa HOM05D000003 ORTHO05D000126 3.0e-06 55.5 62 38.7
AUR62031375 Chenopodium quinoa HOM05D000003 ORTHO05D000006 3.0e-06 55.5 98 31.6
CANSAT64G0573 Cannabis sativa HOM05D000003 ORTHO05D000126 4.0e-06 55.1 63 38.1
QL04p012421 Quercus lobata HOM05D000003 ORTHO05D000126 4.0e-06 55.1 96 29.2
QL05p016467 Quercus lobata HOM05D000003 ORTHO05D000006 4.0e-06 55.1 77 32.5
Atru.chr6.1097 Acer truncatum HOM05D000003 ORTHO05D000126 5.2e-06 54.7 76 34.2
CANSAT11G1818 Cannabis sativa HOM05D000003 ORTHO05D000004 5.2e-06 54.7 68 36.8
CANSAT80G0750 Cannabis sativa HOM05D000003 ORTHO05D000126 5.2e-06 54.7 45 53.3
AUR62006131 Chenopodium quinoa HOM05D000003 ORTHO05D000126 5.2e-06 54.7 99 33.3
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 5.2e-06 54.7 68 36.8
QL04p060520 Quercus lobata HOM05D000003 ORTHO05D000126 5.2e-06 54.7 77 32.5
QL07p021558 Quercus lobata HOM05D000003 ORTHO05D000006 5.2e-06 54.7 83 32.5
Rhsim06G0052000 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.2e-06 54.7 69 39.1
CANSAT54G2709 Cannabis sativa HOM05D000003 ORTHO05D000004 6.7e-06 54.3 98 33.7
CANSAT56G0696 Cannabis sativa HOM05D000003 ORTHO05D000126 6.7e-06 54.3 52 44.2
Atru.chr13.1329 Acer truncatum HOM05D000003 ORTHO05D000126 8.8e-06 53.9 71 35.2
Atru.chr2.1880 Acer truncatum HOM05D000003 ORTHO05D000126 8.8e-06 53.9 79 34.2
COL.COLO4_06478 Corchorus olitorius HOM05D000003 ORTHO05D000126 8.8e-06 53.9 98 33.7
COL.COLO4_33689 Corchorus olitorius HOM05D000003 ORTHO05D000126 8.8e-06 53.9 66 39.4
Dinv06062 Davidia involucrata HOM05D000003 ORTHO05D000126 8.8e-06 53.9 70 32.9
Gohir.A05G005200 Gossypium hirsutum HOM05D012289 ORTHO05D000126 8.8e-06 53.9 69 34.8
QL01p020507 Quercus lobata HOM05D000003 ORTHO05D000126 8.8e-06 53.9 77 29.9
QL05p001179 Quercus lobata HOM05D000003 ORTHO05D000126 8.8e-06 53.9 93 25.8
QL05p080911 Quercus lobata HOM05D000774 ORTHO05D000602 8.8e-06 53.9 95 32.6
QL11p001555 Quercus lobata HOM05D000003 ORTHO05D000126 8.8e-06 53.9 67 34.3
QL11p001829 Quercus lobata HOM05D000003 ORTHO05D000126 8.8e-06 53.9 67 34.3
QL11p055190 Quercus lobata HOM05D000003 ORTHO05D000126 8.8e-06 53.9 66 34.8


User provided reference genes

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