Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c38087 Carica papaya HOM05D005491 ORTHO05D006973 3.6e-79 298.1 145 100.0
GSVIVG01016137001 Vitis vinifera HOM05D005491 ORTHO05D006973 1.1e-46 190.3 153 66.7
Dinv20356 Davidia involucrata HOM05D005491 ORTHO05D006973 1.4e-46 189.9 163 61.3
Haze_10765 Corylus avellana HOM05D005491 ORTHO05D006973 9.0e-46 187.2 154 64.9
Potri.010G250200 Populus trichocarpa HOM05D005491 ORTHO05D006973 4.4e-45 184.9 158 63.9
Cfa005563 Carpinus fangiana HOM05D005491 ORTHO05D006973 1.7e-44 183.0 154 63.6
Manes.16G045400 Manihot esculenta HOM05D005491 ORTHO05D006973 2.2e-44 182.6 153 64.1
Prupe.3G167000 Prunus persica HOM05D005491 ORTHO05D006973 6.4e-44 181.0 156 63.5
Atru.chr1.2698 Acer truncatum HOM05D005491 ORTHO05D006973 8.4e-44 180.6 155 62.6
AL3G35200 Arabidopsis lyrata HOM05D005491 ORTHO05D006973 1.1e-43 180.3 152 62.5
CARHR097080 Cardamine hirsuta HOM05D005491 ORTHO05D006973 1.4e-43 179.9 157 61.1
CiPaw.02G049600 Carya illinoinensis HOM05D005491 ORTHO05D006973 3.2e-43 178.7 153 60.8
Carub.0003s2116 Capsella rubella HOM05D005491 ORTHO05D006973 5.4e-43 177.9 158 61.4
Thecc.06G064400 Theobroma cacao HOM05D005491 ORTHO05D006973 9.3e-43 177.2 149 65.1
AT3G21200 Arabidopsis thaliana HOM05D005491 ORTHO05D006973 1.2e-42 176.8 148 62.8
Sp3g19180 Schrenkiella parvula HOM05D005491 ORTHO05D006973 2.1e-42 176.0 159 60.4
COL.COLO4_31205 Corchorus olitorius HOM05D005491 ORTHO05D006973 2.7e-42 175.6 159 59.7
Ciclev10026115m.g Citrus clementina HOM05D005491 ORTHO05D006973 3.5e-42 175.3 152 61.2
Sabra10G0194700 Salix brachista HOM05D005491 ORTHO05D006973 3.5e-42 175.3 158 62.0
C01p43060 Brassica napus HOM05D005491 ORTHO05D006973 7.8e-42 174.1 157 61.1
BolC1t04253H Brassica oleracea HOM05D005491 ORTHO05D006973 7.8e-42 174.1 157 61.1
Aa31LG8G7890 Aethionema arabicum HOM05D005491 ORTHO05D006973 1.7e-41 172.9 150 61.3
A05p27490 Brassica napus HOM05D005491 ORTHO05D006973 1.7e-41 172.9 147 61.9
MD09G1158800 Malus domestica HOM05D005491 ORTHO05D006973 1.7e-41 172.9 155 61.9
BcaB06g26202 Brassica carinata HOM05D005491 ORTHO05D006973 2.3e-41 172.6 155 60.0
BcaC09g49056 Brassica carinata HOM05D005491 ORTHO05D006973 2.3e-41 172.6 157 60.5
BraA01t03481Z Brassica rapa HOM05D005491 ORTHO05D006973 5.1e-41 171.4 152 59.9
BraA05t21640Z Brassica rapa HOM05D005491 ORTHO05D006973 5.1e-41 171.4 148 62.2
CSS0040638 Camellia sinensis var. sinensis HOM05D005491 ORTHO05D006973 6.6e-41 171.0 156 64.1
THA.LOC104817926 Tarenaya hassleriana HOM05D005491 ORTHO05D006973 1.1e-40 170.2 155 60.6
BcaB04g20605 Brassica carinata HOM05D005491 ORTHO05D006973 1.5e-40 169.9 154 59.7
BcaNung05297 Brassica carinata HOM05D005491 ORTHO05D006973 1.5e-40 169.9 154 59.7
A01p33690 Brassica napus HOM05D005491 ORTHO05D006973 2.5e-40 169.1 155 58.7
Ah.15g094670 Amaranthus hybridus HOM05D005491 ORTHO05D006973 3.3e-40 168.7 156 58.3
CANSAT01G1753 Cannabis sativa HOM05D005491 ORTHO05D006973 3.3e-40 168.7 161 59.0
RcHm_v2.0_Chr2g0150111 Rosa chinensis HOM05D005491 ORTHO05D006973 4.3e-40 168.3 154 62.3
Hund18611 Selenicereus undatus HOM05D005491 ORTHO05D006973 9.6e-40 167.2 162 56.2
Sc15g0000930 Simmondsia chinensis HOM05D005491 ORTHO05D006973 1.3e-39 166.8 154 59.7
FvH4_6g37280 Fragaria vesca HOM05D005491 ORTHO05D006973 1.6e-39 166.4 154 60.4
FAN14G5581 Fragaria x ananassa HOM05D005491 ORTHO05D005725 1.6e-39 166.4 154 60.4
BcaC05g28263 Brassica carinata HOM05D005491 ORTHO05D006973 3.6e-39 165.2 147 60.5
C05p42580 Brassica napus HOM05D005491 ORTHO05D006973 3.6e-39 165.2 147 60.5
Eucgr.F04012 Eucalyptus grandis HOM05D005491 ORTHO05D006973 3.6e-39 165.2 158 60.8
Thhalv10021148m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 3.6e-39 165.2 160 57.5
Thhalv10021146m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 4.8e-39 164.9 160 57.5
BolC5t32978H Brassica oleracea HOM05D005491 ORTHO05D006973 6.2e-39 164.5 147 60.5
Duzib192G0032 Durio zibethinus HOM05D005491 ORTHO05D006973 1.1e-38 163.7 150 60.7
FAN09G1743 Fragaria x ananassa HOM05D005491 ORTHO05D006973 1.1e-38 163.7 154 59.1
EL10Ac7g18224 Beta vulgaris HOM05D005491 ORTHO05D006973 1.8e-38 162.9 176 53.4
CsaV3_3G010780 Cucumis sativus L. HOM05D005491 ORTHO05D006973 2.4e-38 162.5 154 57.1
MELO3C006296.2 Cucumis melo HOM05D005491 ORTHO05D006973 1.5e-37 159.8 154 56.5
FAN02G3895 Fragaria x ananassa HOM05D005491 ORTHO05D006973 1.5e-37 159.8 154 59.1
PGR102G1295 Punica granatum HOM05D005491 ORTHO05D006973 2.0e-37 159.5 157 60.5
AUR62025582 Chenopodium quinoa HOM05D005491 ORTHO05D006973 3.4e-37 158.7 157 56.7
Sed0002659 Sechium edule HOM05D005491 ORTHO05D006973 3.4e-37 158.7 159 57.2
Gohir.D05G114500 Gossypium hirsutum HOM05D005491 ORTHO05D006973 5.8e-37 157.9 146 59.6
vmacro17061 Vaccinium macrocarpon HOM05D005491 ORTHO05D006973 7.6e-37 157.5 144 61.1
Gorai.009G118600 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.3e-36 156.8 146 59.6
Sed0027406 Sechium edule HOM05D005491 ORTHO05D006973 2.2e-36 156.0 154 55.8
TWI18G1464 Tripterygium wilfordii HOM05D005491 ORTHO05D006973 4.9e-36 154.8 146 57.5
Nn2g12576 Nelumbo nucifera HOM05D005491 ORTHO05D006973 1.1e-35 153.7 170 51.8
Rhsim12G0214300 Rhododendron simsii HOM05D005491 ORTHO05D006973 1.9e-35 152.9 132 64.4
Potri.008G008801 Populus trichocarpa HOM05D005491 ORTHO05D006973 2.7e-34 149.1 152 57.9
Actinidia00637 Actinidia chinensis HOM05D005491 ORTHO05D006973 1.3e-33 146.7 160 51.2
ClCG05G003150 Citrullus lanatus HOM05D005491 ORTHO05D006973 1.8e-33 146.4 174 48.9
Lj6C21T3 Lonicera japonica HOM05D005491 ORTHO05D006973 3.0e-33 145.6 149 53.0
MBI14_g30702_MAGBIO Magnolia biondii HOM05D005491 ORTHO05D006973 5.1e-33 144.8 142 57.7
PSO063G4509 Papaver somniferum HOM05D005491 ORTHO05D006973 1.1e-32 143.7 112 64.3
Cc04_g00370 Coffea canephora HOM05D005491 ORTHO05D006973 5.6e-32 141.4 166 51.8
TAR383G0879 Trochodendron aralioides HOM05D005491 ORTHO05D006973 5.6e-32 141.4 96 70.8
Migut.D00894 Erythranthe guttata HOM05D005491 ORTHO05D006973 7.4e-32 141.0 137 57.7
Haze_10762 Corylus avellana HOM05D005491 ORTHO05D006973 9.6e-32 140.6 130 60.0
PSO782G2961 Papaver somniferum HOM05D005491 ORTHO05D006973 9.6e-32 140.6 112 63.4
Nitab4.5_0002885g0050 Nicotiana tabacum HOM05D005491 ORTHO05D006973 1.3e-31 140.2 153 53.6
PGSC0003DMG400009162 Solanum tuberosum HOM05D005491 ORTHO05D006973 1.3e-31 140.2 136 57.4
SGA_v2.0_scaffold4G02103 Striga asiatica HOM05D005491 ORTHO05D006973 4.8e-31 138.3 114 64.0
Nitab4.5_0001691g0110 Nicotiana tabacum HOM05D005491 ORTHO05D006973 1.8e-30 136.3 156 51.9
DCAR_007669 Daucus carota HOM05D005491 ORTHO05D006973 9.0e-30 134.0 149 53.7
Peaxi162Scf00038g02533 Petunia axillaris HOM05D005491 ORTHO05D006973 1.2e-29 133.7 127 58.3
Lsat_1_v5_gn_4_88641 Lactuca sativa HOM05D005491 ORTHO05D006973 2.0e-29 132.9 156 50.0
SalBow7G0632 Salvia bowleyana HOM05D005491 ORTHO05D006973 5.8e-29 131.3 149 53.0
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 7.6e-29 131.0 82 74.4
Lj3g0002967 Lotus japonicus HOM05D005491 ORTHO05D006973 7.6e-29 131.0 151 50.3
Aqoxy7G03200 Aquilegia oxysepala HOM05D005491 ORTHO05D006973 6.4e-28 127.9 168 47.6
CAN.G790.23 Capsicum annuum HOM05D005491 ORTHO05D006973 5.5e-27 124.8 159 45.9
CDE02G1684 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 4.6e-26 121.7 119 55.5
Lalb_Chr04g0264721 Lupinus albus HOM05D005491 ORTHO05D006973 7.9e-26 120.9 120 56.7
VMungo0647G0411 Vigna mungo HOM05D005491 ORTHO05D006973 1.3e-25 120.2 107 58.9
Glyma.08G222600 Glycine max HOM05D005491 ORTHO05D006973 3.0e-25 119.0 104 60.6
Lj6A3G42 Lonicera japonica HOM05D005491 ORTHO05D006973 8.7e-25 117.5 151 47.7
Phvul.008G255600 Phaseolus vulgaris HOM05D005491 ORTHO05D006973 8.7e-25 117.5 107 56.1
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 1.9e-24 116.3 112 53.6
Solyc03g123880.3 Solanum lycopersicum HOM05D005491 ORTHO05D006973 4.3e-24 115.2 89 65.2
SGA_v2.0_scaffold68G22804 Striga asiatica HOM05D005491 ORTHO05D006973 5.6e-24 114.8 100 59.0
arahy.Tifrunner.gnm1.ann1.5V72PU Arachis hypogaea HOM05D005491 ORTHO05D006973 9.6e-24 114.0 119 58.8
Sopen03g041620 Solanum pennellii HOM05D005491 ORTHO05D006973 2.1e-23 112.8 94 61.7
arahy.Tifrunner.gnm1.ann1.PDFG4L Arachis hypogaea HOM05D005491 ORTHO05D006973 3.7e-23 112.1 119 57.1
Gohir.A05G114100 Gossypium hirsutum HOM05D005491 ORTHO05D006973 1.4e-22 110.2 119 55.5
Oeu023761.1 Olea europaea HOM05D005491 ORTHO05D006973 1.4e-22 110.2 82 63.4
Psat7g263520 Pisum sativum HOM05D005491 ORTHO05D006973 1.4e-22 110.2 125 48.8
Gorai.002G157400 Gossypium raimondii HOM05D005491 ORTHO05D006973 6.9e-22 107.8 104 57.7
Gohir.D01G126833 Gossypium hirsutum HOM05D005491 ORTHO05D006973 9.0e-22 107.5 104 56.7
Ca_20955_v3 Cicer arietinum L. HOM05D005491 ORTHO05D006973 1.2e-21 107.1 157 43.9
TPR.G38706 Trifolium pratense HOM05D005491 ORTHO05D006973 1.5e-21 106.7 159 46.5
CDE05G1859 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 4.5e-21 105.1 82 63.4
Medtr4g006200 Medicago truncatula HOM05D005491 ORTHO05D006973 1.3e-20 103.6 117 49.6
Pp3c7_5080 Physcomitrium patens HOM05D005491 ORTHO05D006973 7.1e-19 97.8 91 56.0
Zm00001eb170870 Zea mays HOM05D005491 ORTHO05D006973 9.3e-19 97.4 100 47.0
Pp3c11_26760 Physcomitrium patens HOM05D005491 ORTHO05D006973 7.9e-18 94.4 91 52.7
AagrBONN_evm.TU.Sc2ySwM_368.2001 Anthoceros agrestis HOM05D005491 ORTHO05D006973 5.1e-17 91.7 96 47.9
HanXRQChr09g0277401 Helianthus annuus HOM05D005491 ORTHO05D006973 5.1e-17 91.7 133 45.9
Zm00001eb319280 Zea mays HOM05D005491 ORTHO05D006973 6.7e-17 91.3 98 45.9
Gohir.D06G077900 Gossypium hirsutum HOM05D005491 ORTHO05D006973 8.7e-17 90.9 95 54.7
ATR0580G202 Amborella trichopoda HOM05D005491 ORTHO05D006973 1.9e-16 89.7 85 60.0
Actinidia31136 Actinidia chinensis HOM05D005491 ORTHO05D006973 1.3e-15 87.0 150 42.0
SEGI_00240 Sequoiadendron giganteum HOM05D005491 ORTHO05D006973 1.6e-15 86.7 135 39.3
Gorai.003G079200 Gossypium raimondii HOM05D005491 ORTHO05D006973 2.2e-15 86.3 73 58.9
Mapoly0005s0279 Marchantia polymorpha HOM05D005491 ORTHO05D006973 2.8e-15 85.9 112 41.1
Gorai.013G054800 Gossypium raimondii HOM05D005491 ORTHO05D006973 3.7e-15 85.5 73 58.9
Gorai.012G122800 Gossypium raimondii HOM05D005491 ORTHO05D006973 4.8e-15 85.1 63 63.5
HPP92_013427 Vanilla planifolia HOM05D005491 ORTHO05D006973 1.1e-14 84.0 146 38.4
Nn6g35127 Nelumbo nucifera HOM05D005491 ORTHO05D006973 7.2e-11 71.2 117 42.7
ECA232G0321 Erigeron canadensis HOM05D005491 ORTHO05D006973 2.7e-10 69.3 100 43.0
FvH4_6g36141 Fragaria vesca HOM05D002283 ORTHO05D005725 6.1e-10 68.2 80 50.0
FAN14G3055 Fragaria x ananassa HOM05D002283 ORTHO05D005725 8.8e-09 64.3 62 53.2
MD17G1145100 Malus domestica HOM05D005491 ORTHO05D006973 1.1e-06 57.4 34 73.5


User provided reference genes

Program Settings