Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c37783 Carica papaya HOM05D000670 ORTHO05D116819 1.5e-102 376.3 210 100.0
Manes.13G105800 Manihot esculenta HOM05D000670 ORTHO05D000529 4.6e-27 125.6 212 42.9
CiPaw.08G147300 Carya illinoinensis HOM05D000670 ORTHO05D000529 2.5e-25 119.8 211 43.6
Haze_03952 Corylus avellana HOM05D000670 ORTHO05D000529 4.3e-25 119.0 214 44.4
Cfa006807 Carpinus fangiana HOM05D000670 ORTHO05D000529 6.3e-24 115.2 198 44.9
CiPaw.07G040800 Carya illinoinensis HOM05D000670 ORTHO05D000529 1.2e-22 110.9 217 40.6
Duzib264G0164 Durio zibethinus HOM05D000670 ORTHO05D000529 2.0e-22 110.2 211 44.5
QL06p037911 Quercus lobata HOM05D000670 ORTHO05D000529 3.4e-22 109.4 211 43.1
Prupe.6G212000 Prunus persica HOM05D000670 ORTHO05D000529 1.7e-21 107.1 212 42.0
RcHm_v2.0_Chr2g0109611 Rosa chinensis HOM05D000670 ORTHO05D000529 3.8e-21 105.9 209 42.6
FvH4_1g18740 Fragaria vesca HOM05D000670 ORTHO05D000529 7.2e-20 101.7 209 41.6
FAN26G1869 Fragaria x ananassa HOM05D000670 ORTHO05D000529 1.6e-19 100.5 209 39.2
FAN19G0634 Fragaria x ananassa HOM05D000670 ORTHO05D000529 2.1e-19 100.1 208 39.9
Duzib187G1614 Durio zibethinus HOM05D000670 ORTHO05D000529 2.7e-19 99.8 214 40.7
Atru.chr3.1104 Acer truncatum HOM05D000670 ORTHO05D000529 7.9e-19 98.2 210 38.6
Atru.chr3.1108 Acer truncatum HOM05D000670 ORTHO05D000529 7.9e-19 98.2 210 38.6
CANSAT01G3219 Cannabis sativa HOM05D000670 ORTHO05D000529 1.4e-18 97.4 235 43.4
FAN28G0905 Fragaria x ananassa HOM05D000670 ORTHO05D000529 1.8e-18 97.1 204 40.7
Thecc.01G081300 Theobroma cacao HOM05D000670 ORTHO05D000529 2.3e-18 96.7 211 40.8
Duzib147G0694 Durio zibethinus HOM05D000670 ORTHO05D000529 9.7e-17 91.3 216 38.0
COL.COLO4_11659 Corchorus olitorius HOM05D000670 ORTHO05D000529 3.7e-16 89.4 216 38.9
Thecc.01G081400 Theobroma cacao HOM05D000670 ORTHO05D000529 4.8e-16 89.0 217 39.6
MD01G1047400 Malus domestica HOM05D000670 ORTHO05D000529 8.2e-16 88.2 204 38.7
GSVIVG01004409001 Vitis vinifera HOM05D000670 ORTHO05D000529 2.4e-15 86.7 183 39.3
FAN23G2459 Fragaria x ananassa HOM05D000670 ORTHO05D000529 4.1e-15 85.9 197 39.1
Dinv23075 Davidia involucrata HOM05D000670 ORTHO05D000529 9.1e-15 84.7 209 33.5
Duzib187G1813 Durio zibethinus HOM05D000670 ORTHO05D000529 1.5e-14 84.0 172 40.7
Gohir.D03G033000 Gossypium hirsutum HOM05D000670 ORTHO05D000529 5.9e-14 82.0 207 39.1
GSVIVG01006588001 Vitis vinifera HOM05D000670 ORTHO05D000529 1.0e-13 81.3 182 39.6
Gorai.003G034600 Gossypium raimondii HOM05D000670 ORTHO05D000529 1.3e-13 80.9 211 39.3
GSVIVG01003698001 Vitis vinifera HOM05D000670 ORTHO05D000529 2.2e-13 80.1 202 37.1
Gohir.A02G147400 Gossypium hirsutum HOM05D000670 ORTHO05D000529 2.9e-13 79.7 211 39.3
GSVIVG01002833001 Vitis vinifera HOM05D000670 ORTHO05D000529 1.1e-12 77.8 185 38.4
Duzib264G0241 Durio zibethinus HOM05D000670 ORTHO05D000529 1.9e-12 77.0 221 36.7
Sed0017851 Sechium edule HOM05D000670 ORTHO05D000529 2.5e-12 76.6 211 34.1
Cfa006808 Carpinus fangiana HOM05D000670 ORTHO05D000529 3.2e-12 76.3 218 34.4
TAR628G0521 Trochodendron aralioides HOM05D000670 ORTHO05D000529 4.2e-12 75.9 174 36.8
Ciclev10027504m.g Citrus clementina HOM05D000670 ORTHO05D000529 7.2e-12 75.1 201 38.3
Duzib147G1159 Durio zibethinus HOM05D000670 ORTHO05D000529 9.4e-12 74.7 218 35.8
Atru.chr3.1106 Acer truncatum HOM05D000745 ORTHO05D030739 1.2e-11 74.3 138 43.5
PGR102G1531 Punica granatum HOM05D000670 ORTHO05D000529 1.6e-11 73.9 195 35.9
Atru.chr3.1112 Acer truncatum HOM05D000670 ORTHO05D000529 2.1e-11 73.6 206 35.9
Manes.13G105700 Manihot esculenta HOM05D000670 ORTHO05D000529 2.7e-11 73.2 229 32.8
Atru.chr3.1103 Acer truncatum HOM05D000670 ORTHO05D000529 3.6e-11 72.8 191 31.4
Atru.chr3.1107 Acer truncatum HOM05D000670 ORTHO05D000529 3.6e-11 72.8 191 31.4
MD15G1305200 Malus domestica HOM05D000670 ORTHO05D000529 6.1e-11 72.0 181 39.8
MD01G1047200 Malus domestica HOM05D000670 ORTHO05D000529 2.3e-10 70.1 220 31.8
RcHm_v2.0_Chr2g0109621 Rosa chinensis HOM05D000670 ORTHO05D000529 5.1e-10 68.9 211 33.6
Gorai.007G229000 Gossypium raimondii HOM05D000670 ORTHO05D000529 8.8e-10 68.2 212 34.4
MBI16_g14666_MAGBIO Magnolia biondii HOM05D000670 ORTHO05D000529 1.5e-09 67.4 215 30.7
QL06p037875 Quercus lobata HOM05D000670 ORTHO05D000529 1.5e-09 67.4 220 32.3
MBI16_g35808_MAGBIO Magnolia biondii HOM05D000670 ORTHO05D000529 2.0e-09 67.0 219 33.8
Gorai.003G034700 Gossypium raimondii HOM05D000670 ORTHO05D000529 2.6e-09 66.6 219 35.2
Aqoxy439s001 Aquilegia oxysepala HOM05D000670 ORTHO05D000529 3.3e-09 66.2 209 34.0
Aqoxy6G00605 Aquilegia oxysepala HOM05D000670 ORTHO05D000529 3.3e-09 66.2 209 34.0
MBI16_g33602_MAGBIO Magnolia biondii HOM05D000670 ORTHO05D000529 3.3e-09 66.2 216 28.2
Atru.chr3.1117 Acer truncatum HOM05D000670 ORTHO05D000529 5.7e-09 65.5 219 29.2
Glyma.11G043700 Glycine max HOM05D000670 ORTHO05D000529 5.7e-09 65.5 212 34.0
MD00G1068800 Malus domestica HOM05D000670 ORTHO05D000529 5.7e-09 65.5 202 34.2
Gohir.A12G081800 Gossypium hirsutum HOM05D000670 ORTHO05D000529 7.4e-09 65.1 208 37.0
Prupe.6G211900 Prunus persica HOM05D000670 ORTHO05D000529 7.4e-09 65.1 219 32.9
FAN26G3275 Fragaria x ananassa HOM05D000670 ORTHO05D000529 9.7e-09 64.7 215 33.5
Potri.007G009400 Populus trichocarpa HOM05D000670 ORTHO05D000529 9.7e-09 64.7 224 33.0
FAN28G3005 Fragaria x ananassa HOM05D000670 ORTHO05D000529 1.3e-08 64.3 215 33.5
TAR376G1164 Trochodendron aralioides HOM05D000670 ORTHO05D000529 1.3e-08 64.3 217 34.6
Dinv26986 Davidia involucrata HOM05D000670 ORTHO05D000529 2.8e-08 63.2 226 31.9
Nn5g29131 Nelumbo nucifera HOM05D000670 ORTHO05D000529 2.8e-08 63.2 222 31.5
Gohir.A11G209900 Gossypium hirsutum HOM05D000670 ORTHO05D000529 3.7e-08 62.8 211 33.2
Gohir.D03G033100 Gossypium hirsutum HOM05D000670 ORTHO05D000529 4.8e-08 62.4 218 34.4
Gohir.A11G210100 Gossypium hirsutum HOM05D000670 ORTHO05D000529 6.3e-08 62.0 217 33.6
DCAR_021919 Daucus carota HOM05D000670 ORTHO05D000529 1.4e-07 60.8 207 29.5
Gohir.D11G053101 Gossypium hirsutum HOM05D000670 ORTHO05D000529 1.8e-07 60.5 193 33.2
TWI53G1959 Tripterygium wilfordii HOM05D000670 ORTHO05D000529 2.4e-07 60.1 219 34.2
ClCG01G018050 Citrullus lanatus HOM05D000670 ORTHO05D000529 4.1e-07 59.3 220 30.9
TAR381G1681 Trochodendron aralioides HOM05D000670 ORTHO05D000529 4.1e-07 59.3 215 29.8
Phvul.002G007500 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 5.3e-07 58.9 187 32.6
VMungo1215G1273 Vigna mungo HOM05D000670 ORTHO05D000529 5.3e-07 58.9 210 31.9
Atru.chr3.1118 Acer truncatum HOM05D000670 ORTHO05D000529 7.0e-07 58.5 213 29.6
GSVIVG01003697001 Vitis vinifera HOM05D000670 ORTHO05D000529 9.1e-07 58.2 200 36.0
Gohir.A02G147300 Gossypium hirsutum HOM05D000670 ORTHO05D000529 1.5e-06 57.4 218 33.9
Gohir.D11G213100 Gossypium hirsutum HOM05D000670 ORTHO05D000529 1.5e-06 57.4 212 33.0
Manes.12G119700 Manihot esculenta HOM05D000670 ORTHO05D000529 1.5e-06 57.4 221 30.3
Potri.005G095250 Populus trichocarpa HOM05D000670 ORTHO05D000529 2.0e-06 57.0 130 34.6
MD16G1282500 Malus domestica HOM05D000670 ORTHO05D000529 2.6e-06 56.6 177 32.2
Phvul.006G198400 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 3.5e-06 56.2 208 31.2
Haze_03951 Corylus avellana HOM05D000670 ORTHO05D000529 5.9e-06 55.5 134 38.8
Lj4A171T49 Lonicera japonica HOM05D000670 ORTHO05D000529 5.9e-06 55.5 182 29.1
Cpa.g.sc129.37 Carica papaya HOM05D000670 ORTHO05D000529 7.7e-06 55.1 234 29.9
FvH4_1g18750 Fragaria vesca HOM05D000670 ORTHO05D000529 7.7e-06 55.1 218 31.2


User provided reference genes

Program Settings