Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c37583 Carica papaya HOM05D001371 ORTHO05D028546 1.2e-64 249.6 116 100.0
THA.LOC104814410 Tarenaya hassleriana HOM05D001371 ORTHO05D001319 1.8e-28 129.4 102 58.8
BcaB02g09419 Brassica carinata HOM05D001371 ORTHO05D001319 3.1e-25 118.6 105 55.2
Sp1g27780 Schrenkiella parvula HOM05D001371 ORTHO05D001319 5.3e-25 117.9 108 51.9
BcaC02g11669 Brassica carinata HOM05D001371 ORTHO05D001319 2.0e-24 115.9 105 53.3
C04p12580 Brassica napus HOM05D001371 ORTHO05D001319 2.0e-24 115.9 105 53.3
BolC4t22904H Brassica oleracea HOM05D001371 ORTHO05D001319 2.0e-24 115.9 105 53.3
BcaC05g27237 Brassica carinata HOM05D001371 ORTHO05D001319 4.5e-24 114.8 108 52.8
Aa31LG9G15570 Aethionema arabicum HOM05D001371 ORTHO05D001319 7.7e-24 114.0 99 54.5
Sp4g17760 Schrenkiella parvula HOM05D001371 ORTHO05D001319 7.7e-24 114.0 102 55.9
A05p10170 Brassica napus HOM05D001371 ORTHO05D001319 1.3e-23 113.2 103 55.3
BraA05t19958Z Brassica rapa HOM05D001371 ORTHO05D001319 1.3e-23 113.2 103 55.3
Thhalv10017562m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 6.5e-23 110.9 102 54.9
AL1G46180 Arabidopsis lyrata HOM05D001371 ORTHO05D001319 8.5e-23 110.5 105 51.4
BcaB07g32873 Brassica carinata HOM05D001371 ORTHO05D001319 9.4e-22 107.1 108 49.1
AT1G32120 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 1.0e-20 103.6 106 49.1
RhsimUnG0223800 Rhododendron simsii HOM05D001371 ORTHO05D001319 1.7e-18 96.3 103 47.6
Dinv22278 Davidia involucrata HOM05D001371 ORTHO05D001319 2.2e-18 95.9 99 46.5
CARHR031460 Cardamine hirsuta HOM05D001371 ORTHO05D001319 2.8e-18 95.5 79 57.0
Nitab4.5_0001604g0030 Nicotiana tabacum HOM05D001371 ORTHO05D001319 6.3e-18 94.4 98 49.0
Nitab4.5_0000397g0330 Nicotiana tabacum HOM05D001371 ORTHO05D001319 1.1e-17 93.6 98 48.0
Atru.chr2.2854 Acer truncatum HOM05D001371 ORTHO05D001319 1.4e-17 93.2 102 43.1
vmacro21038 Vaccinium macrocarpon HOM05D001371 ORTHO05D001319 1.4e-17 93.2 95 48.4
Lj8A168T103 Lonicera japonica HOM05D001371 ORTHO05D001319 1.8e-17 92.8 93 50.5
Actinidia09910 Actinidia chinensis HOM05D001371 ORTHO05D001319 5.3e-17 91.3 98 45.9
Rhsim09G0022000 Rhododendron simsii HOM05D001371 ORTHO05D001319 2.7e-16 89.0 91 48.4
Rhsim09G0022300 Rhododendron simsii HOM05D001371 ORTHO05D001319 2.7e-16 89.0 103 45.6
Hma1.2p1_0673F.1_g201150 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 3.5e-16 88.6 102 45.1
MD03G1206300 Malus domestica HOM05D001371 ORTHO05D001319 4.5e-16 88.2 105 41.9
Sabra16G0286500 Salix brachista HOM05D001371 ORTHO05D001319 4.5e-16 88.2 96 40.6
MSTRG.11923 Avicennia marina HOM05D001371 ORTHO05D001319 5.9e-16 87.8 102 42.2
Hma1.2p1_1222F.1_g268280 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 5.9e-16 87.8 102 45.1
TWI38G1035 Tripterygium wilfordii HOM05D001371 ORTHO05D001319 5.9e-16 87.8 101 44.6
Peaxi162Scf00152g00530 Petunia axillaris HOM05D001371 ORTHO05D001319 7.7e-16 87.4 98 43.9
Peaxi162Scf00450g00078 Petunia axillaris HOM05D001371 ORTHO05D001319 7.7e-16 87.4 98 43.9
Solyc07g064360.3 Solanum lycopersicum HOM05D001371 ORTHO05D001319 7.7e-16 87.4 92 46.7
COL.COLO4_09638 Corchorus olitorius HOM05D001371 ORTHO05D001319 1.3e-15 86.7 111 37.8
PGSC0003DMG400013917 Solanum tuberosum HOM05D001371 ORTHO05D001319 1.7e-15 86.3 92 46.7
Duzib268G0763 Durio zibethinus HOM05D001371 ORTHO05D001319 2.2e-15 85.9 99 44.4
Hma1.2p1_1054F.1_g252550 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 2.2e-15 85.9 98 44.9
Prupe.4G209800 Prunus persica HOM05D001371 ORTHO05D001319 2.2e-15 85.9 103 45.6
QL08p011750 Quercus lobata HOM05D001371 ORTHO05D001319 2.9e-15 85.5 105 44.8
Rhsim06G0215500 Rhododendron simsii HOM05D001371 ORTHO05D001319 2.9e-15 85.5 99 46.5
Rhsim06G0215700 Rhododendron simsii HOM05D001371 ORTHO05D001319 2.9e-15 85.5 98 45.9
Gorai.013G160700 Gossypium raimondii HOM05D001371 ORTHO05D001319 3.8e-15 85.1 99 42.4
COL.COLO4_09639 Corchorus olitorius HOM05D001371 ORTHO05D001319 5.0e-15 84.7 101 40.6
vmacro00629 Vaccinium macrocarpon HOM05D001371 ORTHO05D001319 5.0e-15 84.7 95 44.2
QL08p011743 Quercus lobata HOM05D001371 ORTHO05D001319 8.5e-15 84.0 101 44.6
Psat5g186720 Pisum sativum HOM05D001371 ORTHO05D001319 1.5e-14 83.2 97 40.2
Hma1.2p1_1271F.1_g271770 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 2.5e-14 82.4 102 45.1
CANSAT56G1392 Cannabis sativa HOM05D001371 ORTHO05D001319 3.2e-14 82.0 107 42.1
Lj8C168T12 Lonicera japonica HOM05D001371 ORTHO05D001319 3.2e-14 82.0 103 40.8
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 5.5e-14 81.3 102 44.1
CSS0038284 Camellia sinensis var. sinensis HOM05D001371 ORTHO05D001319 7.2e-14 80.9 96 42.7
Duzib052G0957 Durio zibethinus HOM05D001371 ORTHO05D001319 7.2e-14 80.9 105 39.0
Duzib132G0682 Durio zibethinus HOM05D001371 ORTHO05D001319 1.6e-13 79.7 102 39.2
Ah.01g009220 Amaranthus hybridus HOM05D001371 ORTHO05D001319 2.1e-13 79.3 102 38.2
THA.LOC104817874 Tarenaya hassleriana HOM05D001371 ORTHO05D001319 3.6e-13 78.6 98 38.8
Migut.M01798 Erythranthe guttata HOM05D001371 ORTHO05D001319 4.7e-13 78.2 100 38.0
EL10Ac4g07870 Beta vulgaris HOM05D001371 ORTHO05D001319 6.1e-13 77.8 96 39.6
Ca_14714_v3 Cicer arietinum L. HOM05D001371 ORTHO05D001319 6.1e-13 77.8 89 38.2
Rhsim06G0217900 Rhododendron simsii HOM05D001371 ORTHO05D001319 6.1e-13 77.8 105 40.0
Duzib248G0853 Durio zibethinus HOM05D001371 ORTHO05D001319 8.0e-13 77.4 102 40.2
C05p31530 Brassica napus HOM05D001371 ORTHO05D001319 1.0e-12 77.0 44 68.2
Haze_09653 Corylus avellana HOM05D001371 ORTHO05D001319 1.0e-12 77.0 106 39.6
Migut.M01799 Erythranthe guttata HOM05D001371 ORTHO05D001319 1.0e-12 77.0 99 35.4
FvH4_3g22300 Fragaria vesca HOM05D001371 ORTHO05D001319 1.0e-12 77.0 116 39.7
Hma1.2p1_1222F.1_g268225 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 1.0e-12 77.0 97 44.3
Rhsim06G0215800 Rhododendron simsii HOM05D001371 ORTHO05D001319 1.0e-12 77.0 103 43.7
Ca_27398_v3 Cicer arietinum L. HOM05D001371 ORTHO05D001319 1.4e-12 76.6 90 41.1
QL08p011730 Quercus lobata HOM05D001371 ORTHO05D001319 1.4e-12 76.6 103 42.7
BraA09t38953Z Brassica rapa HOM05D001371 ORTHO05D001319 1.8e-12 76.3 44 65.9
Psat5g179880 Pisum sativum HOM05D001371 ORTHO05D001319 1.8e-12 76.3 103 37.9
Prupe.4G209700 Prunus persica HOM05D001371 ORTHO05D001319 1.8e-12 76.3 101 44.6
Duzib213G0856 Durio zibethinus HOM05D001371 ORTHO05D001319 2.3e-12 75.9 102 41.2
Gorai.005G249100 Gossypium raimondii HOM05D001371 ORTHO05D001319 2.3e-12 75.9 100 40.0
Lj6g0016509 Lotus japonicus HOM05D001371 ORTHO05D001319 4.0e-12 75.1 98 38.8
Rhsim06G0215600 Rhododendron simsii HOM05D001371 ORTHO05D001319 4.0e-12 75.1 89 46.1
Ah.04g165710 Amaranthus hybridus HOM05D001371 ORTHO05D001319 5.2e-12 74.7 102 38.2
A09p34070 Brassica napus HOM05D001371 ORTHO05D001319 5.2e-12 74.7 44 63.6
BolC5t31877H Brassica oleracea HOM05D001371 ORTHO05D001016 8.8e-12 73.9 44 65.9
Cc05_g05620 Coffea canephora HOM05D001371 ORTHO05D001319 8.8e-12 73.9 103 39.8
RcHm_v2.0_Chr5g0038771 Rosa chinensis HOM05D001371 ORTHO05D001319 8.8e-12 73.9 100 40.0
Sopen07g032520 Solanum pennellii HOM05D001371 ORTHO05D001319 8.8e-12 73.9 83 44.6
AUR62015722 Chenopodium quinoa HOM05D001371 ORTHO05D001319 1.2e-11 73.6 102 37.3
Dinv22277 Davidia involucrata HOM05D001371 ORTHO05D001319 1.2e-11 73.6 88 42.0
Psat5g180000 Pisum sativum HOM05D001371 ORTHO05D001319 1.2e-11 73.6 99 37.4
COL.COLO4_10613 Corchorus olitorius HOM05D001371 ORTHO05D001319 1.5e-11 73.2 104 36.5
RcHm_v2.0_Chr5g0038491 Rosa chinensis HOM05D001371 ORTHO05D001319 2.6e-11 72.4 101 43.6
QL05p063779 Quercus lobata HOM05D001371 ORTHO05D001319 3.4e-11 72.0 89 43.8
QL08p011662 Quercus lobata HOM05D001371 ORTHO05D001319 3.4e-11 72.0 102 41.2
QL08p011808 Quercus lobata HOM05D001371 ORTHO05D001319 3.4e-11 72.0 96 40.6
QL08p011669 Quercus lobata HOM05D001371 ORTHO05D001319 4.4e-11 71.6 100 42.0
CSS0037215 Camellia sinensis var. sinensis HOM05D001371 ORTHO05D001319 5.7e-11 71.2 102 39.2
Lj6g0005634 Lotus japonicus HOM05D001371 ORTHO05D001319 5.7e-11 71.2 95 41.1
Psat5g179960 Pisum sativum HOM05D001371 ORTHO05D001319 5.7e-11 71.2 103 37.9
AUR62020491 Chenopodium quinoa HOM05D001371 ORTHO05D001319 7.5e-11 70.9 101 36.6
Gorai.002G087400 Gossypium raimondii HOM05D001371 ORTHO05D001319 7.5e-11 70.9 100 41.0
VMungo0540G1413 Vigna mungo HOM05D001371 ORTHO05D001319 7.5e-11 70.9 102 36.3
Lj6g0000404 Lotus japonicus HOM05D001371 ORTHO05D001319 1.3e-10 70.1 89 37.1
QL08p007333 Quercus lobata HOM05D001371 ORTHO05D001319 1.3e-10 70.1 99 39.4
RcHm_v2.0_Chr5g0038801 Rosa chinensis HOM05D001371 ORTHO05D001319 1.3e-10 70.1 92 42.4
Ca_14715_v3 Cicer arietinum L. HOM05D001371 ORTHO05D001319 1.7e-10 69.7 100 40.0
Eucgr.F03452 Eucalyptus grandis HOM05D001371 ORTHO05D001319 1.7e-10 69.7 92 40.2
Lj1g0013444 Lotus japonicus HOM05D001371 ORTHO05D001319 1.7e-10 69.7 101 37.6
TWI39G0393 Tripterygium wilfordii HOM05D001371 ORTHO05D001319 1.7e-10 69.7 105 39.0
FAN03G3315 Fragaria x ananassa HOM05D001371 ORTHO05D001319 2.2e-10 69.3 97 40.2
AUR62015730 Chenopodium quinoa HOM05D001371 ORTHO05D001319 2.8e-10 68.9 97 36.1
Haze_09654 Corylus avellana HOM05D001371 ORTHO05D001319 2.8e-10 68.9 102 39.2
Lj6g0012919 Lotus japonicus HOM05D001371 ORTHO05D001319 3.7e-10 68.6 95 36.8
Cc05_g13550 Coffea canephora HOM05D001371 ORTHO05D001319 4.8e-10 68.2 102 37.3
GSVIVG01037611001 Vitis vinifera HOM05D001371 ORTHO05D001319 4.8e-10 68.2 82 42.7
FAN16G2046 Fragaria x ananassa HOM05D001371 ORTHO05D001319 8.3e-10 67.4 94 40.4
AUR62015727 Chenopodium quinoa HOM05D001371 ORTHO05D001319 1.1e-09 67.0 91 37.4
CARHR041470 Cardamine hirsuta HOM05D001371 ORTHO05D001319 1.4e-09 66.6 84 38.1
Cpa.g.sc97.31 Carica papaya HOM05D001371 ORTHO05D001319 1.4e-09 66.6 97 39.2
AUR62020479 Chenopodium quinoa HOM05D001371 ORTHO05D001319 1.4e-09 66.6 102 33.3
Solyc07g064380.4 Solanum lycopersicum HOM05D001371 ORTHO05D001319 1.4e-09 66.6 102 36.3
Dinv22276 Davidia involucrata HOM05D001371 ORTHO05D001319 1.8e-09 66.2 93 35.5
AT1G51538 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 2.4e-09 65.9 75 44.0
Sopen07g032580 Solanum pennellii HOM05D001371 ORTHO05D001319 4.1e-09 65.1 102 37.3
RcHm_v2.0_Chr5g0038471 Rosa chinensis HOM05D001371 ORTHO05D001319 7.0e-09 64.3 102 37.3
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 9.1e-09 63.9 103 39.8
RcHm_v2.0_Chr5g0038781 Rosa chinensis HOM05D001371 ORTHO05D001319 9.1e-09 63.9 103 35.0
Thhalv10012017m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 1.2e-08 63.5 79 41.8
Lj1C870G3 Lonicera japonica HOM05D000134 ORTHO05D001319 1.2e-08 63.5 96 41.7
QL08p011782 Quercus lobata HOM05D001371 ORTHO05D001319 1.2e-08 63.5 96 36.5
Sopen07g032560 Solanum pennellii HOM05D001371 ORTHO05D001319 1.2e-08 63.5 102 35.3
CARHR040880 Cardamine hirsuta HOM05D001371 ORTHO05D001319 1.6e-08 63.2 107 34.6
AUR62020481 Chenopodium quinoa HOM05D001371 ORTHO05D001319 1.6e-08 63.2 100 34.0
Aa31LG10G3280 Aethionema arabicum HOM05D001371 ORTHO05D001319 2.0e-08 62.8 94 35.1
Oeu007593.1 Olea europaea HOM05D001371 ORTHO05D001319 2.0e-08 62.8 113 31.9
Sc03g0008760 Simmondsia chinensis HOM05D001371 ORTHO05D001319 2.7e-08 62.4 90 41.1
Ah.04g165720 Amaranthus hybridus HOM05D001371 ORTHO05D001319 3.5e-08 62.0 84 38.1
EL10Ac4g07860 Beta vulgaris HOM05D001371 ORTHO05D001319 3.5e-08 62.0 91 30.8
Peaxi162Scf00450g00737 Petunia axillaris HOM05D001371 ORTHO05D001319 3.5e-08 62.0 101 40.6
ECA236G3969 Erigeron canadensis HOM05D001371 ORTHO05D001319 4.5e-08 61.6 69 44.9
Lalb_Chr02g0155751 Lupinus albus HOM05D001371 ORTHO05D001319 4.5e-08 61.6 90 35.6
Aa31LG3G13050 Aethionema arabicum HOM05D001371 ORTHO05D001319 5.9e-08 61.2 80 45.0
FvH4_3g22321 Fragaria vesca HOM05D001371 ORTHO05D001319 5.9e-08 61.2 103 34.0
Actinidia35333 Actinidia chinensis HOM05D001371 ORTHO05D001319 7.7e-08 60.8 82 36.6
FvH4_3g22331 Fragaria vesca HOM05D001371 ORTHO05D001319 7.7e-08 60.8 92 37.0
CARHR041690 Cardamine hirsuta HOM05D001371 ORTHO05D001319 1.0e-07 60.5 84 40.5
Eucgr.F03451 Eucalyptus grandis HOM05D001371 ORTHO05D001319 1.0e-07 60.5 89 37.1
Sabra16G0286400 Salix brachista HOM05D001371 ORTHO05D001319 1.0e-07 60.5 107 34.6
AL1G58510 Arabidopsis lyrata HOM05D001371 ORTHO05D001319 1.3e-07 60.1 80 36.2
BcaB04g18353 Brassica carinata HOM05D001371 ORTHO05D001319 1.7e-07 59.7 100 36.0
HPP92_005289 Vanilla planifolia HOM05D001371 ORTHO05D001319 1.7e-07 59.7 102 33.3
Rhsim06G0215900 Rhododendron simsii HOM05D001371 ORTHO05D001319 2.3e-07 59.3 108 35.2
Rhsim06G0216000 Rhododendron simsii HOM05D001371 ORTHO05D001319 2.3e-07 59.3 107 33.6
vmacro11736 Vaccinium macrocarpon HOM05D001371 ORTHO05D001319 2.9e-07 58.9 82 35.4
EL10Ac4g07856 Beta vulgaris HOM05D001371 ORTHO05D001319 3.8e-07 58.5 97 33.0
FAN14G4159 Fragaria x ananassa HOM05D001371 ORTHO05D028546 3.8e-07 58.5 87 36.8
FAN14G5970 Fragaria x ananassa HOM05D001371 ORTHO05D028546 3.8e-07 58.5 87 36.8
Hma1.2p1_0673F.1_g201180 Hydrangea macrophylla HOM05D001371 ORTHO05D001319 3.8e-07 58.5 94 31.9
AT1G50790 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 1.1e-06 57.0 74 36.5
COL.COLO4_09641 Corchorus olitorius HOM05D001371 ORTHO05D001319 1.5e-06 56.6 48 50.0
Sed0015741 Sechium edule HOM05D001371 ORTHO05D001319 1.5e-06 56.6 50 42.0
Thhalv10027173m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 2.5e-06 55.8 104 36.5
FAN21G0036 Fragaria x ananassa HOM05D001371 ORTHO05D001319 2.5e-06 55.8 102 33.3
BcaC08g43317 Brassica carinata HOM05D001371 ORTHO05D001319 3.3e-06 55.5 104 34.6
C06p06660 Brassica napus HOM05D001371 ORTHO05D001319 3.3e-06 55.5 105 36.2
BolC6t35778H Brassica oleracea HOM05D001371 ORTHO05D001319 3.3e-06 55.5 104 34.6
CARHR040870 Cardamine hirsuta HOM05D001371 ORTHO05D001319 3.3e-06 55.5 105 32.4
BcaC07g37948 Brassica carinata HOM05D001371 ORTHO05D001319 4.2e-06 55.1 99 33.3
AT1G50770 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 7.2e-06 54.3 68 42.6


User provided reference genes

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