Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c37165 Carica papaya HOM05D005374 ORTHO05D006534 1.5e-54 216.1 118 100.0
Glyma.01G154100 Glycine max HOM05D005374 ORTHO05D006534 1.9e-30 136.0 120 65.0
TPR.G8985 Trifolium pratense HOM05D005374 ORTHO05D006534 3.3e-30 135.2 122 61.5
Psat2g145440 Pisum sativum HOM05D005374 ORTHO05D006534 1.2e-29 133.3 122 60.7
Glyma.11G090700 Glycine max HOM05D005374 ORTHO05D006534 2.1e-29 132.5 120 64.2
Ca_25046_v3 Cicer arietinum L. HOM05D005374 ORTHO05D006534 3.1e-28 128.6 122 59.0
MELO3C010523.2 Cucumis melo HOM05D005374 ORTHO05D006534 3.1e-28 128.6 120 64.2
CsaV3_4G027900 Cucumis sativus L. HOM05D005374 ORTHO05D006534 3.1e-28 128.6 120 64.2
arahy.Tifrunner.gnm1.ann1.B0SCIB Arachis hypogaea HOM05D005374 ORTHO05D006534 4.0e-28 128.3 124 58.1
arahy.Tifrunner.gnm1.ann1.BM6K92 Arachis hypogaea HOM05D005374 ORTHO05D006534 4.0e-28 128.3 124 58.1
Lj2g0008244 Lotus japonicus HOM05D005374 ORTHO05D006534 6.9e-28 127.5 124 60.5
ClCG11G016070 Citrullus lanatus HOM05D005374 ORTHO05D006534 1.2e-27 126.7 120 64.2
TWI18G0367 Tripterygium wilfordii HOM05D005374 ORTHO05D006534 3.4e-27 125.2 135 60.7
Cfa012294 Carpinus fangiana HOM05D005374 ORTHO05D006534 4.4e-27 124.8 123 63.4
Sabra01G0180500 Salix brachista HOM05D005374 ORTHO05D006534 5.8e-27 124.4 123 61.0
Nn1g09345 Nelumbo nucifera HOM05D005374 ORTHO05D006534 7.6e-27 124.0 120 63.3
Nn7g37386 Nelumbo nucifera HOM05D005374 ORTHO05D006534 9.9e-27 123.6 120 62.5
Prupe.1G353600 Prunus persica HOM05D005374 ORTHO05D006534 1.3e-26 123.2 119 60.5
Thhalv10000968m.g Eutrema salsugineum HOM05D005374 ORTHO05D006534 3.8e-26 121.7 120 61.7
Medtr5g025560 Medicago truncatula HOM05D005374 ORTHO05D006534 3.8e-26 121.7 132 56.1
TAR629G3354 Trochodendron aralioides HOM05D005374 ORTHO05D006534 4.9e-26 121.3 118 61.0
GSVIVG01036874001 Vitis vinifera HOM05D005374 ORTHO05D006534 8.4e-26 120.6 119 59.7
Ciclev10012169m.g Citrus clementina HOM05D005374 ORTHO05D006534 1.4e-25 119.8 131 57.3
PGR031G1488 Punica granatum HOM05D005374 ORTHO05D006534 1.9e-25 119.4 122 59.8
Lalb_Chr16g0380381 Lupinus albus HOM05D005374 ORTHO05D006534 2.4e-25 119.0 121 57.9
Sp2g10310 Schrenkiella parvula HOM05D005374 ORTHO05D006534 2.4e-25 119.0 122 57.4
Sc22g0002240 Simmondsia chinensis HOM05D005374 ORTHO05D006534 2.4e-25 119.0 133 53.4
Atru.chr8.2626 Acer truncatum HOM05D005374 ORTHO05D006534 3.2e-25 118.6 118 66.1
Ah.12g058460 Amaranthus hybridus HOM05D005374 ORTHO05D006534 4.2e-25 118.2 123 57.7
Sed0016570 Sechium edule HOM05D005374 ORTHO05D006534 4.2e-25 118.2 115 62.6
RcHm_v2.0_Chr6g0304341 Rosa chinensis HOM05D005374 ORTHO05D006534 5.4e-25 117.9 126 55.6
AL8G13440 Arabidopsis lyrata HOM05D005374 ORTHO05D006534 9.3e-25 117.1 126 57.1
BcaC06g34439 Brassica carinata HOM05D005374 ORTHO05D006534 1.2e-24 116.7 120 59.2
C07p28440 Brassica napus HOM05D005374 ORTHO05D006534 1.2e-24 116.7 120 59.2
CiPaw.11G074900 Carya illinoinensis HOM05D005374 ORTHO05D006534 1.2e-24 116.7 119 59.7
Lsat_1_v5_gn_6_17221 Lactuca sativa HOM05D005374 ORTHO05D006534 1.2e-24 116.7 121 59.5
Aa31LG9G7650 Aethionema arabicum HOM05D005374 ORTHO05D006534 1.6e-24 116.3 120 63.3
Rhsim07G0140100 Rhododendron simsii HOM05D005374 ORTHO05D006534 1.6e-24 116.3 121 58.7
AT5G45360 Arabidopsis thaliana HOM05D005374 ORTHO05D006534 4.6e-24 114.8 125 56.0
CSS0021507 Camellia sinensis var. sinensis HOM05D005374 ORTHO05D006534 4.6e-24 114.8 133 54.9
Hma1.2p1_1841F.1_g304960 Hydrangea macrophylla HOM05D005374 ORTHO05D006534 4.6e-24 114.8 141 51.8
Actinidia14732 Actinidia chinensis HOM05D005374 ORTHO05D006534 7.8e-24 114.0 141 51.8
BolC7t43384H Brassica oleracea HOM05D005374 ORTHO05D006534 7.8e-24 114.0 120 58.3
Lj8A3T11 Lonicera japonica HOM05D005374 ORTHO05D006534 1.7e-23 112.8 132 53.8
Phvul.002G121600 Phaseolus vulgaris HOM05D005374 ORTHO05D006534 1.7e-23 112.8 127 55.9
Thecc.03G319500 Theobroma cacao HOM05D005374 ORTHO05D006534 1.7e-23 112.8 135 53.3
Carub.0008s0275 Capsella rubella HOM05D005374 ORTHO05D006534 2.3e-23 112.5 118 55.9
COL.COLO4_16753 Corchorus olitorius HOM05D005374 ORTHO05D006534 2.3e-23 112.5 135 53.3
Duzib084G1112 Durio zibethinus HOM05D005374 ORTHO05D006534 3.0e-23 112.1 131 54.2
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 3.0e-23 112.1 121 53.7
CARHR176710 Cardamine hirsuta HOM05D005374 ORTHO05D006534 3.9e-23 111.7 121 55.4
QL12p004193 Quercus lobata HOM05D005374 ORTHO05D006534 3.9e-23 111.7 112 67.0
THA.LOC104811099 Tarenaya hassleriana HOM05D005374 ORTHO05D006534 3.9e-23 111.7 135 51.1
vmacro14240 Vaccinium macrocarpon HOM05D005374 ORTHO05D006534 5.1e-23 111.3 118 57.6
ATR0568G167 Amborella trichopoda HOM05D005374 ORTHO05D006534 8.7e-23 110.5 148 52.7
HanXRQChr17g0558081 Helianthus annuus HOM05D005374 ORTHO05D006534 8.7e-23 110.5 118 56.8
AUR62030411 Chenopodium quinoa HOM05D005374 ORTHO05D006534 4.3e-22 108.2 129 52.7
TAR629G2486 Trochodendron aralioides HOM05D005374 ORTHO05D006534 4.3e-22 108.2 118 58.5
VMungo1215G0733 Vigna mungo HOM05D005374 ORTHO05D006534 4.3e-22 108.2 126 54.0
BcaB07g30892 Brassica carinata HOM05D005374 ORTHO05D006534 5.6e-22 107.8 118 52.5
FvH4_2g37370 Fragaria vesca HOM05D005374 ORTHO05D006534 7.3e-22 107.5 134 51.5
FAN15G3753 Fragaria x ananassa HOM05D005374 ORTHO05D006534 7.3e-22 107.5 134 51.5
FAN20G2320 Fragaria x ananassa HOM05D005374 ORTHO05D006534 7.3e-22 107.5 134 51.5
FAN27G3004 Fragaria x ananassa HOM05D005374 ORTHO05D006534 7.3e-22 107.5 134 51.5
Aqoxy3G00850 Aquilegia oxysepala HOM05D005374 ORTHO05D006534 1.6e-21 106.3 119 49.6
Potri.004G236200 Populus trichocarpa HOM05D005374 ORTHO05D006534 1.6e-21 106.3 126 56.3
Dinv37427 Davidia involucrata HOM05D005374 ORTHO05D006534 2.1e-21 105.9 142 50.0
Dinv41805 Davidia involucrata HOM05D005374 ORTHO05D006534 2.1e-21 105.9 143 50.3
EL10Ac5g12585 Beta vulgaris HOM05D005374 ORTHO05D006534 2.8e-21 105.5 130 50.0
BcaC06g31556 Brassica carinata HOM05D005374 ORTHO05D006534 4.8e-21 104.8 119 52.1
Manes.15G191300 Manihot esculenta HOM05D005374 ORTHO05D006534 4.8e-21 104.8 129 55.8
Hund14303 Selenicereus undatus HOM05D005374 ORTHO05D006534 4.8e-21 104.8 136 50.0
AUR62010482 Chenopodium quinoa HOM05D005374 ORTHO05D006534 6.2e-21 104.4 125 51.2
Gohir.D12G204500 Gossypium hirsutum HOM05D005374 ORTHO05D006534 6.2e-21 104.4 134 53.0
MD15G1000900 Malus domestica HOM05D005374 ORTHO05D006534 8.1e-21 104.0 140 47.1
Gorai.008G219400 Gossypium raimondii HOM05D005374 ORTHO05D006534 1.8e-20 102.8 132 53.0
BraA06t27536Z Brassica rapa HOM05D005374 ORTHO05D006534 2.4e-20 102.4 124 51.6
BcaC04g21776 Brassica carinata HOM05D005374 ORTHO05D006534 5.3e-20 101.3 121 53.7
C09p27770 Brassica napus HOM05D005374 ORTHO05D006534 5.3e-20 101.3 121 53.7
A06p46630 Brassica napus HOM05D005374 ORTHO05D006534 9.0e-20 100.5 119 52.1
Eucgr.E01146 Eucalyptus grandis HOM05D005374 ORTHO05D006534 9.0e-20 100.5 126 52.4
Gohir.A12G201800 Gossypium hirsutum HOM05D005374 ORTHO05D006534 9.0e-20 100.5 128 57.8
A09p21700 Brassica napus HOM05D005374 ORTHO05D006534 2.6e-19 99.0 118 50.8
CSS0025693 Camellia sinensis var. sinensis HOM05D005374 ORTHO05D006534 2.6e-19 99.0 125 50.4
CDE02G3607 Ceratophyllum demersum HOM05D005374 ORTHO05D006534 4.5e-19 98.2 123 50.4
Migut.A00528 Erythranthe guttata HOM05D005374 ORTHO05D006534 9.9e-19 97.1 172 41.3
CAN.G884.8 Capsicum annuum HOM05D005374 ORTHO05D006534 1.3e-18 96.7 155 45.2
Oeu015544.1 Olea europaea HOM05D005374 ORTHO05D006534 2.2e-18 95.9 181 40.9
Oeu046780.1 Olea europaea HOM05D005374 ORTHO05D006534 2.9e-18 95.5 185 39.5
THA.LOC104811124 Tarenaya hassleriana HOM05D005374 ORTHO05D006534 3.8e-18 95.1 89 58.4
Duzib205G0577 Durio zibethinus HOM05D005374 ORTHO05D006534 6.4e-18 94.4 131 50.4
SGA_v2.0_scaffold89G27377 Striga asiatica HOM05D005374 ORTHO05D006534 8.4e-18 94.0 179 39.1
DCAR_004533 Daucus carota HOM05D005374 ORTHO05D006534 1.1e-17 93.6 136 43.4
SalBow8G5130 Salvia bowleyana HOM05D005374 ORTHO05D006534 3.2e-17 92.0 50 86.0
MSTRG.11863 Avicennia marina HOM05D005374 ORTHO05D006534 4.2e-17 91.7 181 39.2
MBI04_g06277_MAGBIO Magnolia biondii HOM05D005374 ORTHO05D006534 4.2e-17 91.7 49 87.8
unitig_747.g21918 Utricularia gibba HOM05D005374 ORTHO05D006534 7.1e-17 90.9 176 40.3
Cc08_g05810 Coffea canephora HOM05D005374 ORTHO05D006534 9.3e-17 90.5 72 63.9
SEGI_04185 Sequoiadendron giganteum HOM05D005374 ORTHO05D006534 7.9e-16 87.4 166 41.0
Peaxi162Scf00045g00731 Petunia axillaris HOM05D005374 ORTHO05D006534 1.3e-15 86.7 105 48.6
Nitab4.5_0001175g0180 Nicotiana tabacum HOM05D005374 ORTHO05D006534 2.3e-15 85.9 181 38.1
Nitab4.5_0006438g0020 Nicotiana tabacum HOM05D005374 ORTHO05D006534 3.0e-15 85.5 183 37.7
PGSC0003DMG400018477 Solanum tuberosum HOM05D005374 ORTHO05D006534 3.9e-15 85.1 183 39.3
Os06g0709100 Oryza sativa ssp. japonica HOM05D005374 ORTHO05D006534 6.7e-15 84.3 126 43.7
CAN.G1511.1 Capsicum annuum HOM05D005374 ORTHO05D006534 8.7e-15 84.0 48 77.1
Solyc08g075380.3 Solanum lycopersicum HOM05D005374 ORTHO05D006534 8.7e-15 84.0 48 77.1
Sopen08g024010 Solanum pennellii HOM05D005374 ORTHO05D006534 8.7e-15 84.0 48 77.1
PGSC0003DMG400001963 Solanum tuberosum HOM05D005374 ORTHO05D006534 8.7e-15 84.0 48 77.1
Peaxi162Scf00193g00717 Petunia axillaris HOM05D005374 ORTHO05D006534 1.5e-14 83.2 48 77.1
Zm00001eb227600 Zea mays HOM05D005374 ORTHO05D006534 1.5e-14 83.2 129 41.9
Actinidia26790 Actinidia chinensis HOM05D005374 ORTHO05D006534 1.9e-14 82.8 123 45.5
Haze_08435 Corylus avellana HOM05D005374 ORTHO05D006534 9.6e-14 80.5 119 47.9
HPP92_022746 Vanilla planifolia HOM05D005374 ORTHO05D006534 9.6e-14 80.5 116 42.2
Nitab4.5_0002244g0130 Nicotiana tabacum HOM05D005374 ORTHO05D006534 4.8e-13 78.2 120 42.5
SEGI_09240 Sequoiadendron giganteum HOM05D005374 ORTHO05D006534 1.2e-11 73.6 126 40.5
Pp3c9_17990 Physcomitrium patens HOM05D005374 ORTHO05D006534 4.5e-11 71.6 113 41.6
PSO541G3556 Papaver somniferum HOM05D005374 ORTHO05D006534 9.9e-11 70.5 184 34.8
DCAR_000721 Daucus carota HOM05D005374 ORTHO05D006534 4.9e-10 68.2 53 54.7
SMO353G0174 Selaginella moellendorffii HOM05D005374 ORTHO05D006534 4.9e-10 68.2 48 64.6
Mapoly0004s0051 Marchantia polymorpha HOM05D005374 ORTHO05D006534 6.4e-10 67.8 117 39.3
CBR_g46850 Chara braunii HOM05D005374 ORTHO05D006534 1.4e-09 66.6 41 75.6


User provided reference genes

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