Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c37122 Carica papaya HOM05D000793 ORTHO05D000783 3.2e-107 391.7 196 100.0
Cfa003074 Carpinus fangiana HOM05D000793 ORTHO05D000783 4.8e-26 122.1 183 39.3
Thecc.09G087900 Theobroma cacao HOM05D000793 ORTHO05D000783 3.1e-25 119.4 165 44.8
TAR636G0599 Trochodendron aralioides HOM05D000793 ORTHO05D000783 1.2e-24 117.5 154 43.5
Haze_25922 Corylus avellana HOM05D000793 ORTHO05D000783 4.5e-24 115.5 183 38.3
Duzib187G0200 Durio zibethinus HOM05D000793 ORTHO05D000783 2.2e-23 113.2 165 43.0
COL.COLO4_18192 Corchorus olitorius HOM05D000793 ORTHO05D000783 4.9e-23 112.1 165 42.4
Atru.chr7.1608 Acer truncatum HOM05D000793 ORTHO05D000783 1.4e-22 110.5 158 43.0
QL02p062406 Quercus lobata HOM05D000793 ORTHO05D000783 1.9e-22 110.2 175 41.7
CANSAT56G2597 Cannabis sativa HOM05D000793 ORTHO05D000783 9.3e-22 107.8 177 38.4
Gohir.D06G071600 Gossypium hirsutum HOM05D000793 ORTHO05D000783 5.1e-20 102.1 159 40.9
Dinv42325 Davidia involucrata HOM05D000793 ORTHO05D000783 2.5e-19 99.8 192 35.9
Gohir.A06G073100 Gossypium hirsutum HOM05D000793 ORTHO05D000783 2.5e-19 99.8 159 41.5
Gorai.010G083500 Gossypium raimondii HOM05D000793 ORTHO05D000783 2.5e-19 99.8 159 40.9
GSVIVG01015193001 Vitis vinifera HOM05D000793 ORTHO05D000783 2.8e-18 96.3 175 40.0
Sed0009858 Sechium edule HOM05D000793 ORTHO05D000783 1.2e-16 90.9 158 39.2
MSTRG.20119 Avicennia marina HOM05D000793 ORTHO05D000783 1.5e-16 90.5 172 37.2
Cc06_g11490 Coffea canephora HOM05D000793 ORTHO05D000783 1.5e-16 90.5 199 38.2
vmacro06296 Vaccinium macrocarpon HOM05D000793 ORTHO05D000783 1.5e-16 90.5 163 37.4
ClCG03G015510 Citrullus lanatus HOM05D000793 ORTHO05D000783 5.9e-16 88.6 204 35.3
Sp7g27560 Schrenkiella parvula HOM05D000793 ORTHO05D000783 7.7e-16 88.2 186 33.3
MELO3C015481.2 Cucumis melo HOM05D000793 ORTHO05D000783 1.7e-15 87.0 167 37.1
CiPaw.04G148700 Carya illinoinensis HOM05D000793 ORTHO05D000783 5.0e-15 85.5 161 34.2
MD15G1208500 Malus domestica HOM05D000793 ORTHO05D000783 5.0e-15 85.5 167 35.3
THA.LOC104820021 Tarenaya hassleriana HOM05D000793 ORTHO05D000783 6.5e-15 85.1 142 34.5
Nn6g35499 Nelumbo nucifera HOM05D000793 ORTHO05D000783 1.4e-14 84.0 175 37.1
PSO210G1825 Papaver somniferum HOM05D000793 ORTHO05D000783 1.9e-14 83.6 190 35.3
Nitab4.5_0010634g0020 Nicotiana tabacum HOM05D000793 ORTHO05D000783 3.2e-14 82.8 173 38.2
Aqoxy7G04018 Aquilegia oxysepala HOM05D000793 ORTHO05D000783 5.5e-14 82.0 182 31.9
Carub.0004s1489 Capsella rubella HOM05D000793 ORTHO05D000783 5.5e-14 82.0 166 34.3
CsaV3_1G040540 Cucumis sativus L. HOM05D000793 ORTHO05D000783 5.5e-14 82.0 178 35.4
Oeu006014.1 Olea europaea HOM05D000793 ORTHO05D000783 2.1e-13 80.1 196 35.7
Oeu006015.1 Olea europaea HOM05D000793 ORTHO05D000783 2.1e-13 80.1 196 35.7
Manes.16G101200 Manihot esculenta HOM05D000793 ORTHO05D000783 2.7e-13 79.7 158 34.8
Oeu006013.1 Olea europaea HOM05D000793 ORTHO05D000783 2.7e-13 79.7 196 35.7
Oeu006016.1 Olea europaea HOM05D000793 ORTHO05D000783 2.7e-13 79.7 202 35.1
Ciclev10007477m.g Citrus clementina HOM05D000793 ORTHO05D000783 3.6e-13 79.3 155 36.8
Nitab4.5_0010540g0010 Nicotiana tabacum HOM05D000793 ORTHO05D000783 2.3e-12 76.6 173 37.0
Migut.J00639 Erythranthe guttata HOM05D000793 ORTHO05D000783 5.1e-12 75.5 160 36.2
AL7G22550 Arabidopsis lyrata HOM05D000793 ORTHO05D000783 4.3e-11 72.4 165 30.9
Actinidia29905 Actinidia chinensis HOM05D000597 ORTHO05D000603 1.3e-10 70.9 99 42.4
arahy.Tifrunner.gnm1.ann1.QS3S2N Arachis hypogaea HOM05D000793 ORTHO05D000783 1.3e-10 70.9 101 44.6
SGA_v2.0_scaffold62G21619 Striga asiatica HOM05D000793 ORTHO05D000783 1.3e-10 70.9 169 32.5
SalBow6G0899 Salvia bowleyana HOM05D000793 ORTHO05D000783 1.7e-10 70.5 168 37.5
PSO210G4498 Papaver somniferum HOM05D000793 ORTHO05D000783 2.8e-10 69.7 189 32.3
TWI34G0687 Tripterygium wilfordii HOM05D000793 ORTHO05D000783 2.8e-10 69.7 180 32.8
Thhalv10024391m.g Eutrema salsugineum HOM05D000793 ORTHO05D000783 6.3e-10 68.6 187 29.9
Glyma.17G054400 Glycine max HOM05D000793 ORTHO05D000783 6.3e-10 68.6 74 47.3
DCAR_017082 Daucus carota HOM05D000793 ORTHO05D000783 1.8e-09 67.0 161 31.7
arahy.Tifrunner.gnm1.ann1.IZYS5X Arachis hypogaea HOM05D000793 ORTHO05D000783 4.1e-09 65.9 95 45.3
AT4G29750 Arabidopsis thaliana HOM05D000793 ORTHO05D000783 5.3e-09 65.5 197 27.9
Lj4g0008673 Lotus japonicus HOM05D000793 ORTHO05D000783 5.3e-09 65.5 87 43.7
Sabra06G0117800 Salix brachista HOM05D000793 ORTHO05D000783 5.3e-09 65.5 124 32.3
VMungo1215G1102 Vigna mungo HOM05D000793 ORTHO05D000783 5.3e-09 65.5 93 46.2
Sc08g0008510 Simmondsia chinensis HOM05D000793 ORTHO05D000783 9.1e-09 64.7 176 31.2
CARHR237630 Cardamine hirsuta HOM05D000793 ORTHO05D000783 1.2e-08 64.3 212 26.9
Aa31LG2G10260 Aethionema arabicum HOM05D000793 ORTHO05D000783 1.5e-08 63.9 143 34.3
FAN28G0624 Fragaria x ananassa HOM05D000793 ORTHO05D000783 7.7e-08 61.6 158 31.0
Solyc07g039500.4 Solanum lycopersicum HOM05D000793 ORTHO05D000783 1.3e-07 60.8 124 37.9
Sopen07g019080 Solanum pennellii HOM05D000793 ORTHO05D000783 1.3e-07 60.8 124 37.9
FAN26G1060 Fragaria x ananassa HOM05D000793 ORTHO05D000783 1.7e-07 60.5 159 30.2
FAN26G3305 Fragaria x ananassa HOM05D000793 ORTHO05D000783 2.9e-07 59.7 159 30.2
MBI04_g31735_MAGBIO Magnolia biondii HOM05D000793 ORTHO05D000783 5.0e-07 58.9 181 31.5
FvH4_1g07640 Fragaria vesca HOM05D000793 ORTHO05D000783 6.5e-07 58.5 159 29.6
PGSC0003DMG401022041 Solanum tuberosum HOM05D000793 ORTHO05D000783 6.5e-07 58.5 133 35.3
RcHm_v2.0_Chr2g0093501 Rosa chinensis HOM05D000793 ORTHO05D000783 8.5e-07 58.2 167 29.3
Eucgr.C00880 Eucalyptus grandis HOM05D000793 ORTHO05D000783 1.1e-06 57.8 48 58.3
FAN19G0544 Fragaria x ananassa HOM05D000793 ORTHO05D000783 1.1e-06 57.8 159 30.2
FAN23G1209 Fragaria x ananassa HOM05D000793 ORTHO05D000783 1.4e-06 57.4 158 29.1
Phvul.003G136300 Phaseolus vulgaris HOM05D000793 ORTHO05D000783 1.4e-06 57.4 92 40.2
TPR.G9458 Trifolium pratense HOM05D000793 ORTHO05D000783 1.9e-06 57.0 88 40.9
Medtr4g126140 Medicago truncatula HOM05D000793 ORTHO05D000783 4.2e-06 55.8 84 41.7
Peaxi162Scf00221g00078 Petunia axillaris HOM05D000793 ORTHO05D000783 4.2e-06 55.8 172 33.1
EL10Ac8g19199 Beta vulgaris HOM05D000793 ORTHO05D000783 7.2e-06 55.1 64 42.2


User provided reference genes

Program Settings