Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c36918 Carica papaya HOM05D004666 ORTHO05D005822 1.9e-199 699.1 393 100.0
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 2.0e-79 300.4 377 46.9
Atru.chr8.1588 Acer truncatum HOM05D004666 ORTHO05D005822 3.6e-73 279.6 392 49.2
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 3.4e-71 273.1 389 46.5
Ciclev10011197m.g Citrus clementina HOM05D004666 ORTHO05D005822 2.2e-70 270.4 416 44.2
Sabra12G0045300 Salix brachista HOM05D004666 ORTHO05D005822 2.8e-70 270.0 226 62.8
Gohir.A07G200500 Gossypium hirsutum HOM05D004666 ORTHO05D005822 4.9e-70 269.2 377 42.7
Sabra08G0160300 Salix brachista HOM05D004666 ORTHO05D005822 1.4e-69 267.7 226 61.9
Gorai.001G233200 Gossypium raimondii HOM05D004666 ORTHO05D005822 3.5e-68 263.1 378 42.6
Dinv21227 Davidia involucrata HOM05D004666 ORTHO05D005822 5.0e-67 259.2 355 43.9
Gohir.D07G206800 Gossypium hirsutum HOM05D004666 ORTHO05D005822 6.6e-67 258.8 378 42.3
Thecc.01G223300 Theobroma cacao HOM05D004666 ORTHO05D005822 1.5e-66 257.7 387 45.7
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 5.6e-66 255.8 336 47.6
COL.COLO4_15658 Corchorus olitorius HOM05D004666 ORTHO05D005822 9.5e-66 255.0 214 60.7
Potri.008G200900 Populus trichocarpa HOM05D004666 ORTHO05D005822 2.8e-65 253.4 225 59.6
TAR365G1212 Trochodendron aralioides HOM05D004666 ORTHO05D005822 2.3e-64 250.4 363 42.1
Manes.13G012000 Manihot esculenta HOM05D004666 ORTHO05D005822 5.2e-64 249.2 409 46.7
Duzib114G0569 Durio zibethinus HOM05D004666 ORTHO05D005822 1.5e-63 247.7 310 50.0
Prupe.7G114200 Prunus persica HOM05D004666 ORTHO05D005822 3.7e-62 243.0 391 48.1
MD12G1022600 Malus domestica HOM05D004666 ORTHO05D005822 1.4e-61 241.1 210 58.1
Cc06_g05530 Coffea canephora HOM05D004666 ORTHO05D005822 1.0e-59 235.0 213 53.5
TWI34G1071 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 1.3e-59 234.6 391 43.0
TWI73G1120 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 1.3e-59 234.6 383 45.7
GSVIVG01032069001 Vitis vinifera HOM05D004666 ORTHO05D005822 2.3e-59 233.8 377 40.6
CANSAT54G2995 Cannabis sativa HOM05D004666 ORTHO05D005822 1.1e-58 231.5 229 52.8
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 2.5e-58 230.3 349 44.4
FAN02G3237 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.6e-57 227.6 377 44.3
FvH4_6g18260 Fragaria vesca HOM05D004666 ORTHO05D005822 3.6e-57 226.5 365 45.8
Lalb_Chr02g0155381 Lupinus albus HOM05D004666 ORTHO05D005822 8.0e-57 225.3 223 50.2
RcHm_v2.0_Chr3g0472701 Rosa chinensis HOM05D004666 ORTHO05D005822 1.1e-56 224.9 227 53.7
RcHm_v2.0_Chr4g0409331 Rosa chinensis HOM05D004666 ORTHO05D005822 1.8e-56 224.2 219 54.8
THA.LOC104827512 Tarenaya hassleriana HOM05D004666 ORTHO05D005822 3.1e-56 223.4 341 45.2
FAN09G1276 Fragaria x ananassa HOM05D004666 ORTHO05D005822 5.2e-56 222.6 231 51.5
DCAR_013376 Daucus carota HOM05D004666 ORTHO05D005822 4.4e-55 219.5 218 49.1
Aa31LG7G4140 Aethionema arabicum HOM05D004666 ORTHO05D005822 7.5e-55 218.8 340 41.2
Sp1g17360 Schrenkiella parvula HOM05D004666 ORTHO05D005822 7.5e-55 218.8 348 41.4
Carub.0001s1905 Capsella rubella HOM05D004666 ORTHO05D005822 1.3e-54 218.0 339 44.8
C08p19490 Brassica napus HOM05D004666 ORTHO05D005822 1.7e-54 217.6 373 41.0
FvH4_7g02500 Fragaria vesca HOM05D004666 ORTHO05D005822 1.7e-54 217.6 227 52.0
BcaB03g12912 Brassica carinata HOM05D004666 ORTHO05D005822 2.9e-54 216.9 228 50.4
FAN05G4874 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.9e-54 216.9 381 43.3
AT1G19485 Arabidopsis thaliana HOM05D004666 ORTHO05D005822 8.3e-54 215.3 360 42.5
FAN06G2408 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.4e-53 214.5 227 51.1
MD09G1081300 Malus domestica HOM05D004666 ORTHO05D005822 2.4e-53 213.8 203 54.7
BolC8t49572H Brassica oleracea HOM05D004666 ORTHO05D005822 4.1e-53 213.0 376 40.4
Nn2g14084 Nelumbo nucifera HOM05D004666 ORTHO05D005822 5.4e-53 212.6 201 52.7
BraA08t34913Z Brassica rapa HOM05D004666 ORTHO05D005822 1.2e-52 211.5 348 41.1
CARHR020050 Cardamine hirsuta HOM05D004666 ORTHO05D005822 1.6e-52 211.1 339 45.4
Oeu040521.1 Olea europaea HOM05D004666 ORTHO05D005822 2.7e-52 210.3 303 49.5
A08p29790 Brassica napus HOM05D004666 ORTHO05D005822 3.5e-52 209.9 348 40.8
MBI17_g35786_MAGBIO Magnolia biondii HOM05D004666 ORTHO05D005822 3.5e-52 209.9 201 52.2
ECA248G3102 Erigeron canadensis HOM05D004666 ORTHO05D005822 4.6e-52 209.5 216 50.9
FAN03G3209 Fragaria x ananassa HOM05D004666 ORTHO05D005822 4.6e-52 209.5 227 51.1
EL10Ac7g16949 Beta vulgaris HOM05D004666 ORTHO05D005822 7.8e-52 208.8 215 48.4
A06p15660 Brassica napus HOM05D004666 ORTHO05D005822 1.3e-51 208.0 368 39.7
C05p17890 Brassica napus HOM05D004666 ORTHO05D005822 1.3e-51 208.0 351 39.9
BraA06t24675Z Brassica rapa HOM05D004666 ORTHO05D005822 1.3e-51 208.0 368 39.7
PGR142G0825 Punica granatum HOM05D004666 ORTHO05D005822 1.3e-51 208.0 377 40.6
SalBow3G3865 Salvia bowleyana HOM05D004666 ORTHO05D005822 2.3e-51 207.2 216 50.0
Lsat_1_v5_gn_1_48480 Lactuca sativa HOM05D004666 ORTHO05D005822 3.0e-51 206.8 216 48.6
Hund26220 Selenicereus undatus HOM05D004666 ORTHO05D005822 3.0e-51 206.8 222 45.9
HanXRQChr01g0029141 Helianthus annuus HOM05D004666 ORTHO05D005822 5.0e-51 206.1 216 50.9
Thhalv10006802m.g Eutrema salsugineum HOM05D004666 ORTHO05D005822 6.6e-51 205.7 324 42.9
PSO384G1605 Papaver somniferum HOM05D004666 ORTHO05D005822 1.5e-50 204.5 229 48.9
Phvul.011G176600 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 3.3e-50 203.4 235 48.1
Medtr1g060580 Medicago truncatula HOM05D004666 ORTHO05D005822 4.3e-50 203.0 228 49.1
Psat6g082920 Pisum sativum HOM05D004666 ORTHO05D005822 5.6e-50 202.6 226 48.7
BolC5t30496H Brassica oleracea HOM05D004666 ORTHO05D005822 7.3e-50 202.2 352 39.5
Lj5g0018797 Lotus japonicus HOM05D004666 ORTHO05D005822 1.6e-49 201.1 224 47.3
Nitab4.5_0000794g0050 Nicotiana tabacum HOM05D004666 ORTHO05D005822 2.1e-49 200.7 224 48.7
PSO425G0050 Papaver somniferum HOM05D004666 ORTHO05D005822 2.1e-49 200.7 232 47.8
Sed0014063 Sechium edule HOM05D004666 ORTHO05D005822 2.8e-49 200.3 225 48.4
arahy.Tifrunner.gnm1.ann1.G8H5C8 Arachis hypogaea HOM05D004666 ORTHO05D005822 3.6e-49 199.9 378 36.2
FAN05G5602 Fragaria x ananassa HOM05D004666 ORTHO05D005822 3.6e-49 199.9 371 41.8
Migut.J00966 Erythranthe guttata HOM05D004666 ORTHO05D005822 1.4e-48 198.0 219 47.0
TPR.G35431 Trifolium pratense HOM05D004666 ORTHO05D005822 5.2e-48 196.1 227 47.6
Aqoxy3G00997 Aquilegia oxysepala HOM05D004666 ORTHO05D005822 1.2e-47 194.9 221 44.3
AUR62033523 Chenopodium quinoa HOM05D004666 ORTHO05D005822 1.5e-47 194.5 344 36.6
Glyma.10G068100 Glycine max HOM05D004666 ORTHO05D005822 3.4e-47 193.4 214 47.2
arahy.Tifrunner.gnm1.ann1.LSN657 Arachis hypogaea HOM05D004666 ORTHO05D005822 5.8e-47 192.6 378 35.4
arahy.Tifrunner.gnm1.ann1.WFL2XE Arachis hypogaea HOM05D004666 ORTHO05D005822 7.5e-47 192.2 372 36.0
ClCG10G019140 Citrullus lanatus HOM05D004666 ORTHO05D005822 9.9e-47 191.8 367 39.0
Ca_26672_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 1.7e-46 191.0 221 45.2
Ca_30723_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 1.7e-46 191.0 221 45.2
Solyc09g009710.4 Solanum lycopersicum HOM05D004666 ORTHO05D005822 1.7e-46 191.0 217 46.5
Sopen09g004490 Solanum pennellii HOM05D004666 ORTHO05D005822 1.7e-46 191.0 217 46.5
PGSC0003DMG400008959 Solanum tuberosum HOM05D004666 ORTHO05D005822 2.9e-46 190.3 215 47.0
Sed0022470 Sechium edule HOM05D004666 ORTHO05D005822 3.7e-46 189.9 402 41.5
VMungo0720G2175 Vigna mungo HOM05D004666 ORTHO05D005822 1.1e-45 188.3 215 47.0
SGA_v2.0_scaffold147G36363 Striga asiatica HOM05D004666 ORTHO05D005822 1.9e-45 187.6 212 45.8
Ah.08g210700 Amaranthus hybridus HOM05D004666 ORTHO05D005822 3.2e-45 186.8 217 42.9
arahy.Tifrunner.gnm1.ann1.T4KAXF Arachis hypogaea HOM05D004666 ORTHO05D005822 5.4e-45 186.0 373 35.9
Lj5g0013478 Lotus japonicus HOM05D004666 ORTHO05D005822 7.1e-45 185.7 197 49.7
Lj2C133G10 Lonicera japonica HOM05D004666 ORTHO05D005822 2.7e-44 183.7 215 49.3
CsaV3_3G037120 Cucumis sativus L. HOM05D004666 ORTHO05D005822 3.5e-44 183.3 341 40.2
unitig_749.g14294 Utricularia gibba HOM05D004666 ORTHO05D005822 1.0e-43 181.8 225 43.1
Phvul.007G229800 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 3.0e-43 180.3 220 44.5
MELO3C009457.2 Cucumis melo HOM05D004666 ORTHO05D005822 3.9e-43 179.9 390 37.9
ECA248G2596 Erigeron canadensis HOM05D004666 ORTHO05D005822 3.9e-43 179.9 183 51.4
vmacro17219 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 7.3e-42 175.6 508 33.9
Peaxi162Scf00015g00639 Petunia axillaris HOM05D004666 ORTHO05D005822 2.1e-41 174.1 381 40.9
vmacro22687 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 8.1e-41 172.2 481 33.5
Zm00001eb147330 Zea mays HOM05D004666 ORTHO05D005822 6.0e-36 156.0 210 41.0
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 1.0e-35 155.2 194 39.2
CDE08G1659 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 1.3e-35 154.8 208 36.5
HPP92_015079 Vanilla planifolia HOM05D004666 ORTHO05D005822 1.9e-34 151.0 221 38.9
Rhsim09G0020300 Rhododendron simsii HOM05D004666 ORTHO05D005822 2.5e-34 150.6 296 37.2
Nitab4.5_0009916g0020 Nicotiana tabacum HOM05D004666 ORTHO05D005822 1.0e-27 128.6 376 29.5
AL1G32230 Arabidopsis lyrata HOM05D004666 ORTHO05D005822 1.1e-26 125.2 214 44.4
ATR0820G291 Amborella trichopoda HOM05D004666 ORTHO05D005822 6.9e-24 115.9 94 47.9
Sc02g0001000 Simmondsia chinensis HOM05D004666 ORTHO05D005822 1.9e-21 107.8 275 40.0
Haze_16424 Corylus avellana HOM05D004666 ORTHO05D005822 3.5e-20 103.6 151 41.1
Peaxi162Scf00036g00125 Petunia axillaris HOM05D004666 ORTHO05D005822 6.0e-20 102.8 377 34.0
QL04p079053 Quercus lobata HOM05D004666 ORTHO05D005822 1.4e-16 91.7 143 37.8
QL03p004414 Quercus lobata HOM05D004666 ORTHO05D005822 9.9e-15 85.5 141 37.6
arahy.Tifrunner.gnm1.ann1.AE8L4W Arachis hypogaea HOM05D004666 ORTHO05D005822 1.1e-13 82.0 111 44.1
Hma1.2p1_0084F.1_g043500 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 1.1e-13 82.0 133 38.3
AagrBONN_evm.TU.Sc2ySwM_344.3422 Anthoceros agrestis HOM05D004666 ORTHO05D005822 9.3e-13 79.0 167 33.5
Mapoly0021s0027 Marchantia polymorpha HOM05D004666 ORTHO05D005822 1.6e-12 78.2 103 40.8
Pp3c1_31470 Physcomitrium patens HOM05D004666 ORTHO05D005822 2.7e-12 77.4 88 43.2
FAN10G4251 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.0e-11 75.5 171 32.7
Os07g0454400 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 1.8e-11 74.7 125 36.8
CBR_g38478 Chara braunii HOM05D004666 ORTHO05D005822 6.9e-08 62.8 65 43.1
MD03G1008700 Malus domestica HOM05D004666 ORTHO05D005822 5.8e-07 59.7 32 71.9


User provided reference genes

Program Settings