Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c36787.2 Carica papaya HOM05D004701 ORTHO05D005220 3.7e-60 234.6 111 100.0
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 2.7e-34 148.7 88 73.9
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 2.7e-34 148.7 88 73.9
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 2.7e-34 148.7 87 77.0
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 4.6e-34 147.9 88 75.0
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 7.9e-34 147.1 98 67.3
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 1.0e-33 146.7 87 72.4
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 1.3e-33 146.4 88 71.6
COL.COLO4_36922 Corchorus olitorius HOM05D004701 ORTHO05D005220 1.8e-33 146.0 87 74.7
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 1.8e-33 146.0 88 73.9
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 3.9e-33 144.8 98 66.3
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 3.9e-33 144.8 88 73.9
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 3.9e-33 144.8 88 73.9
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 5.1e-33 144.4 88 75.0
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 5.1e-33 144.4 87 71.3
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 8.7e-33 143.7 88 73.9
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 8.7e-33 143.7 86 75.6
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 1.1e-32 143.3 88 71.6
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 1.9e-32 142.5 87 70.1
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 1.9e-32 142.5 87 72.4
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 2.5e-32 142.1 87 70.1
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 2.5e-32 142.1 88 72.7
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 2.5e-32 142.1 88 72.7
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 2.5e-32 142.1 88 73.9
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 4.3e-32 141.4 86 69.8
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 5.6e-32 141.0 87 71.3
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 5.6e-32 141.0 87 71.3
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 7.4e-32 140.6 87 70.1
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 9.6e-32 140.2 87 70.1
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 1.3e-31 139.8 88 71.6
CARHR019320 Cardamine hirsuta HOM05D004701 ORTHO05D005220 1.6e-31 139.4 88 69.3
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 2.8e-31 138.7 88 71.6
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 3.7e-31 138.3 87 71.3
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 3.7e-31 138.3 88 71.6
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 3.7e-31 138.3 87 70.1
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 3.7e-31 138.3 87 70.1
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 8.1e-31 137.1 88 71.6
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 1.8e-30 136.0 88 65.9
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 6.9e-30 134.0 99 61.6
Actinidia04876 Actinidia chinensis HOM05D004701 ORTHO05D005220 1.2e-29 133.3 88 68.2
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 1.5e-29 132.9 88 64.8
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 1.5e-29 132.9 88 61.4
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 2.0e-29 132.5 88 65.9
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 2.6e-29 132.1 88 67.0
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 2.6e-29 132.1 86 65.1
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 2.6e-29 132.1 86 65.1
ClCG06G016050 Citrullus lanatus HOM05D004701 ORTHO05D005220 3.4e-29 131.7 98 61.2
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 5.8e-29 131.0 87 65.5
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 5.8e-29 131.0 87 69.0
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 5.8e-29 131.0 88 68.2
Sed0001989 Sechium edule HOM05D004701 ORTHO05D005220 7.6e-29 130.6 88 65.9
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 1.7e-28 129.4 79 69.6
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 1.7e-28 129.4 87 65.5
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 1.7e-28 129.4 87 67.8
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 2.2e-28 129.0 88 64.8
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 2.2e-28 129.0 86 64.0
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 3.8e-28 128.3 88 60.2
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 4.9e-28 127.9 86 62.8
DCAR_010367 Daucus carota HOM05D004701 ORTHO05D005220 8.4e-28 127.1 83 66.3
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 1.4e-27 126.3 87 63.2
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 2.4e-27 125.6 88 60.2
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 3.2e-27 125.2 87 66.7
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 1.2e-26 123.2 88 62.5
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 2.1e-26 122.5 88 61.4
MD14G1203400 Malus domestica HOM05D004701 ORTHO05D005220 2.1e-26 122.5 90 62.2
Lj5A108G55 Lonicera japonica HOM05D004701 ORTHO05D005220 2.7e-26 122.1 120 50.8
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 3.5e-26 121.7 91 57.1
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 4.6e-26 121.3 87 59.8
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 7.9e-26 120.6 88 63.6
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 7.9e-26 120.6 87 60.9
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 7.9e-26 120.6 85 61.2
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 1.3e-25 119.8 87 60.9
Psat5g195480 Pisum sativum HOM05D004701 ORTHO05D005220 2.3e-25 119.0 87 58.6
HPP92_019783 Vanilla planifolia HOM05D004701 ORTHO05D005220 3.0e-25 118.6 88 58.0
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 5.1e-25 117.9 88 60.2
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 5.1e-25 117.9 88 60.2
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 8.7e-25 117.1 88 59.1
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 8.7e-25 117.1 88 59.1
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 8.7e-25 117.1 88 58.0
Lj2g0020469 Lotus japonicus HOM05D004701 ORTHO05D005220 4.3e-24 114.8 88 56.8
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 5.6e-24 114.4 90 55.6
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 9.6e-24 113.6 88 56.8
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 1.6e-23 112.8 91 56.0
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 1.6e-23 112.8 92 55.4
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 2.1e-23 112.5 86 59.3
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 4.8e-23 111.3 88 56.8
CDE02G4120 Ceratophyllum demersum HOM05D004701 ORTHO05D005220 8.2e-23 110.5 87 58.6
HPP92_019730 Vanilla planifolia HOM05D004701 ORTHO05D005220 1.1e-22 110.2 88 54.5
Lj4g0017943 Lotus japonicus HOM05D004701 ORTHO05D005220 3.4e-21 105.1 92 51.1
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 4.9e-20 101.3 126 40.5
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 1.1e-19 100.1 86 48.8
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 7.1e-19 97.4 90 54.4
Mapoly0021s0150 Marchantia polymorpha HOM05D004701 ORTHO05D005220 1.2e-18 96.7 87 48.3
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 1.0e-17 93.6 87 51.7
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 8.7e-17 90.5 87 49.4
Pp3c17_15290 Physcomitrium patens HOM05D004701 ORTHO05D005220 1.1e-16 90.1 87 50.6
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis HOM05D004701 ORTHO05D005220 4.8e-15 84.7 86 46.5
MBI02_g20482_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 4.8e-15 84.7 52 69.2
Oeu052445.1 Olea europaea HOM05D004701 ORTHO05D005220 4.1e-14 81.6 55 63.6
MELO3C028766.2 Cucumis melo HOM05D001162 ORTHO05D022475 2.3e-09 65.9 45 62.2
SMO117G0311 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.8e-09 63.9 56 46.4
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 7.4e-08 60.8 42 69.0
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 7.4e-08 60.8 42 69.0
SMO202G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 8.2e-07 57.4 72 37.5
MBI05_g10671_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 6.9e-06 54.3 34 64.7


User provided reference genes

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