Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c36694 Carica papaya HOM05D000026 ORTHO05D119376 2.1e-25 118.2 60 100.0
Sabra05G0144800 Salix brachista HOM05D000026 ORTHO05D001292 8.1e-17 89.7 57 71.9
Ciclev10003430m.g Citrus clementina HOM05D000026 ORTHO05D001292 2.2e-14 81.6 57 68.4
Potri.005G189500 Populus trichocarpa HOM05D000026 ORTHO05D001292 2.9e-14 81.3 57 66.7
Thecc.08G147100 Theobroma cacao HOM05D000026 ORTHO05D001292 9.2e-13 76.3 50 74.0
Lj5g0002118 Lotus japonicus HOM05D000026 ORTHO05D001292 2.1e-12 75.1 57 61.4
TAR376G0779 Trochodendron aralioides HOM05D000026 ORTHO05D001292 2.1e-12 75.1 57 68.4
Manes.18G089500 Manihot esculenta HOM05D000026 ORTHO05D001292 2.7e-12 74.7 57 66.7
Dinv41106 Davidia involucrata HOM05D001639 ORTHO05D008274 7.8e-12 73.2 50 72.0
TWI60G0636 Tripterygium wilfordii HOM05D000026 ORTHO05D001292 3.0e-11 71.2 47 72.3
DCAR_010091 Daucus carota HOM05D000026 ORTHO05D001292 5.1e-11 70.5 57 56.1
TWI34G1929 Tripterygium wilfordii HOM05D000026 ORTHO05D001292 8.6e-11 69.7 47 70.2
QL02p024613 Quercus lobata HOM05D000026 ORTHO05D001292 1.5e-10 68.9 47 68.1
BcaC06g33850 Brassica carinata HOM05D000026 ORTHO05D001292 1.9e-10 68.6 57 56.1
C07p36210 Brassica napus HOM05D000026 ORTHO05D001292 1.9e-10 68.6 57 56.1
BolC7t44137H Brassica oleracea HOM05D000026 ORTHO05D001292 1.9e-10 68.6 57 56.1
COL.COLO4_08291 Corchorus olitorius HOM05D000026 ORTHO05D001292 2.5e-10 68.2 47 70.2
A06p41430 Brassica napus HOM05D000026 ORTHO05D001292 3.3e-10 67.8 57 56.1
BraA06t27069Z Brassica rapa HOM05D000026 ORTHO05D001292 4.3e-10 67.4 57 56.1
Duzib093G2132 Durio zibethinus HOM05D000026 ORTHO05D001292 5.6e-10 67.0 50 66.0
TPR.G4 Trifolium pratense HOM05D000026 ORTHO05D001292 5.6e-10 67.0 47 61.7
Ca_10693_v3 Cicer arietinum L. HOM05D000026 ORTHO05D001292 9.5e-10 66.2 47 63.8
Haze_17729 Corylus avellana HOM05D000026 ORTHO05D001292 9.5e-10 66.2 57 59.6
CSS0019825 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D001292 1.6e-09 65.5 57 57.9
Gohir.A02G065700 Gossypium hirsutum HOM05D000026 ORTHO05D001292 1.6e-09 65.5 50 60.0
Gohir.D02G071600 Gossypium hirsutum HOM05D000026 ORTHO05D001292 1.6e-09 65.5 50 60.0
Gorai.005G080800 Gossypium raimondii HOM05D000026 ORTHO05D001292 1.6e-09 65.5 50 60.0
BcaNung06417 Brassica carinata HOM05D000026 ORTHO05D001292 2.1e-09 65.1 57 56.1
CSS0011331 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D001292 2.1e-09 65.1 47 66.0
Prupe.8G022700 Prunus persica HOM05D000026 ORTHO05D001292 2.1e-09 65.1 57 57.9
Nn5g28673 Nelumbo nucifera HOM05D000026 ORTHO05D001292 2.8e-09 64.7 49 65.3
Thhalv10005258m.g Eutrema salsugineum HOM05D000026 ORTHO05D001292 3.6e-09 64.3 57 54.4
Oeu007016.1 Olea europaea HOM05D000026 ORTHO05D001292 3.6e-09 64.3 47 66.0
Cc10_g14140 Coffea canephora HOM05D000026 ORTHO05D001292 4.7e-09 63.9 57 59.6
Psat0s3359g0040 Pisum sativum HOM05D000026 ORTHO05D001292 8.1e-09 63.2 47 61.7
Lalb_Chr06g0161491 Lupinus albus HOM05D000026 ORTHO05D001292 1.1e-08 62.8 46 65.2
Eucgr.F04258 Eucalyptus grandis HOM05D000026 ORTHO05D001292 1.4e-08 62.4 47 61.7
AL8G19750 Arabidopsis lyrata HOM05D000026 ORTHO05D001292 1.8e-08 62.0 49 59.2
Sp2g16310 Schrenkiella parvula HOM05D000026 ORTHO05D001292 1.8e-08 62.0 51 56.9
CiPaw.15G019300 Carya illinoinensis HOM05D000026 ORTHO05D001292 2.3e-08 61.6 47 59.6
Medtr1g099260 Medicago truncatula HOM05D000026 ORTHO05D001292 2.3e-08 61.6 47 61.7
Carub.0008s0723 Capsella rubella HOM05D000026 ORTHO05D001292 3.1e-08 61.2 49 59.2
THA.LOC104798882 Tarenaya hassleriana HOM05D000026 ORTHO05D001292 3.1e-08 61.2 49 57.1
Actinidia01149 Actinidia chinensis HOM05D000026 ORTHO05D001292 4.0e-08 60.8 49 55.1
MD10G1020300 Malus domestica HOM05D000026 ORTHO05D001292 4.0e-08 60.8 57 56.1
Aa31LG4G5570 Aethionema arabicum HOM05D000026 ORTHO05D001292 8.9e-08 59.7 57 50.9
MD08G1201700 Malus domestica HOM05D000026 ORTHO05D001292 8.9e-08 59.7 57 52.6
PGR044G2503 Punica granatum HOM05D000026 ORTHO05D001292 8.9e-08 59.7 46 60.9
Sc02g0004310 Simmondsia chinensis HOM05D000026 ORTHO05D001292 8.9e-08 59.7 54 59.3
CARHR194620 Cardamine hirsuta HOM05D000026 ORTHO05D001292 1.2e-07 59.3 46 60.9
Phvul.007G078200 Phaseolus vulgaris HOM05D000026 ORTHO05D001292 1.2e-07 59.3 46 63.0
Lsat_1_v5_gn_1_8741 Lactuca sativa HOM05D000026 ORTHO05D001292 1.5e-07 58.9 44 61.4
PSO675G5222 Papaver somniferum HOM05D000026 ORTHO05D001292 2.0e-07 58.5 44 61.4
PSO675G5299 Papaver somniferum HOM05D000026 ORTHO05D001292 2.0e-07 58.5 44 61.4
AT5G42120 Arabidopsis thaliana HOM05D000026 ORTHO05D001292 3.4e-07 57.8 49 55.1
ClCG08G006580 Citrullus lanatus HOM05D000026 ORTHO05D001292 3.4e-07 57.8 57 52.6
PSO622G0001 Papaver somniferum HOM05D000026 ORTHO05D001292 5.8e-07 57.0 44 56.8
Aqoxy6G00383 Aquilegia oxysepala HOM05D000026 ORTHO05D001292 7.6e-07 56.6 50 58.0
ECA194G0006 Erigeron canadensis HOM05D000026 ORTHO05D001292 7.6e-07 56.6 44 59.1
RcHm_v2.0_Chr7g0230531 Rosa chinensis HOM05D000026 ORTHO05D001292 7.6e-07 56.6 49 57.1
VMungo0720G0999 Vigna mungo HOM05D000026 ORTHO05D001292 7.6e-07 56.6 45 62.2
CANSAT25G0644 Cannabis sativa HOM05D000026 ORTHO05D001292 2.2e-06 55.1 47 53.2
FvH4_4g18200 Fragaria vesca HOM05D000026 ORTHO05D001292 2.2e-06 55.1 49 55.1
FvH4_5g32800 Fragaria vesca HOM05D000026 ORTHO05D001292 2.2e-06 55.1 49 55.1
FAN08G3414 Fragaria x ananassa HOM05D000026 ORTHO05D001292 2.2e-06 55.1 49 55.1
FAN18G3562 Fragaria x ananassa HOM05D000026 ORTHO05D001292 2.2e-06 55.1 49 55.1
FAN07G0884 Fragaria x ananassa HOM05D000026 ORTHO05D001292 3.7e-06 54.3 49 53.1
Glyma.10G227000 Glycine max HOM05D000026 ORTHO05D001292 3.7e-06 54.3 47 59.6
HanXRQChr03g0074001 Helianthus annuus HOM05D000026 ORTHO05D001292 3.7e-06 54.3 47 48.9
HanXRQChr05g0161421 Helianthus annuus HOM05D000026 ORTHO05D001292 3.7e-06 54.3 45 53.3
Actinidia37153 Actinidia chinensis HOM05D000026 ORTHO05D001292 4.9e-06 53.9 47 51.1
DCAR_001092 Daucus carota HOM05D000026 ORTHO05D001292 4.9e-06 53.9 51 51.0
LjContig00141g0002537 Lotus japonicus HOM05D000026 ORTHO05D001292 6.4e-06 53.5 53 52.8
PSO017G3547 Papaver somniferum HOM05D000026 ORTHO05D001292 6.4e-06 53.5 47 48.9
AUR62026756 Chenopodium quinoa HOM05D000026 ORTHO05D001292 8.4e-06 53.1 50 52.0
Medtr5g077100 Medicago truncatula HOM05D000026 ORTHO05D001292 8.4e-06 53.1 46 54.3


User provided reference genes

Program Settings